No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41945 AT2G41945 AT2G41945 |
| fragaria_vesca | FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 |
| malus_domestica | MD03G1221500.v1.1 MD11G1239000.v1.1 |
| prunus_persica | Prupe.7G082900_v2.0.a1 Prupe.7G082900_v2.0.a1 |
| pyrus_communis | pycom11g21050 |
| rosa_chinensis | RchiOBHm_Chr3g0479091 |
| rosa_laevigata | RLG00000023608 |
| rosa_multiflora | Rmu_sc0005645.1_g000017 Rmu_sc0005992.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00402740 |
| rosa_rugosa | Rorug03G0170500 Rorug03G0170600 Rorug03G0170700 Rorug03G0170700 Rorug03G0170800 Rorug03G0170900 Rorug03G0304400 Rorug03G0304500 Rorug03G0304600 Rorug03G0304700 |
| rosa_samantha | Rh3AG221800 Rh3BG254300 Rh3DG246500 Rh4AG008600 Rh4CG009300 Rh4CG009700 Rh4CG009800 |
| rosa_wichuraiana | Rw3G019910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 55, 77, 112 |
| AclWI | GGATC | 1 cut(s) | 150 |
| AcsI | RAATTY | 2 cut(s) | 9, 92 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AlwI | GGATC | 1 cut(s) | 150 |
| ApeKI | GCWGC | 2 cut(s) | 19, 109 |
| ApoI | RAATTY | 2 cut(s) | 9, 92 |
| BbvI | GCAGC | 2 cut(s) | 31, 121 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BisI | GCNGC | 3 cut(s) | 20, 110, 113 |
| BlsI | GCNGC | 3 cut(s) | 21, 111, 114 |
| BmsI | GCATC | 1 cut(s) | 107 |
| BsaBI | GATNNNNATC | 2 cut(s) | 84, 121 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| Bse8I | GATNNNNATC | 2 cut(s) | 84, 121 |
| BseJI | GATNNNNATC | 2 cut(s) | 84, 121 |
| BseXI | GCAGC | 2 cut(s) | 31, 121 |
| BsgI | GTGCAG | 1 cut(s) | 38 |
| Bsh1285I | CGRYCG | 1 cut(s) | 119 |
| BsiEI | CGRYCG | 1 cut(s) | 119 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| Bsp143I | GATC | 2 cut(s) | 116, 142 |
| BspACI | CCGC | 3 cut(s) | 55, 77, 112 |
| BspPI | GGATC | 1 cut(s) | 150 |
| BssMI | GATC | 2 cut(s) | 116, 142 |
| BstKTI | GATC | 2 cut(s) | 119, 145 |
| BstMBI | GATC | 2 cut(s) | 116, 142 |
| BstMCI | CGRYCG | 1 cut(s) | 119 |
| BstV1I | GCAGC | 2 cut(s) | 31, 121 |
| BstX2I | RGATCY | 1 cut(s) | 142 |
| BstYI | RGATCY | 1 cut(s) | 142 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 19, 54 |
| CviAII | CATG | 3 cut(s) | 52, 61, 191 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DpnI | GATC | 2 cut(s) | 118, 144 |
| DpnII | GATC | 2 cut(s) | 116, 142 |
| EcoRI | GAATTC | 1 cut(s) | 9 |
| EcoT22I | ATGCAT | 1 cut(s) | 196 |
| FaeI | CATG | 3 cut(s) | 55, 64, 194 |
| FaiI | YATR | 5 cut(s) | 44, 53, 62, 192, 196 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 164, 196 |
| FatI | CATG | 3 cut(s) | 51, 60, 190 |
| Fnu4HI | GCNGC | 3 cut(s) | 20, 110, 113 |
| Fsp4HI | GCNGC | 3 cut(s) | 20, 110, 113 |
| FspBI | CTAG | 1 cut(s) | 89 |
| GluI | GCNGC | 3 cut(s) | 20, 110, 113 |
| HapII | CCGG | 1 cut(s) | 14 |
| Hin1II | CATG | 3 cut(s) | 55, 64, 194 |
| HinfI | GANTC | 2 cut(s) | 85, 122 |
| HpaII | CCGG | 1 cut(s) | 14 |
| Hpy166II | GTNNAC | 1 cut(s) | 130 |
| Hpy188I | TCNGA | 2 cut(s) | 121, 163 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 146, 181 |
| Hpy8I | GTNNAC | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 98, 194 |
| Hsp92II | CATG | 3 cut(s) | 55, 64, 194 |
| Kzo9I | GATC | 2 cut(s) | 116, 142 |
| LpnPI | CCDG | 2 cut(s) | 27, 142 |
| Lsp1109I | GCAGC | 2 cut(s) | 31, 121 |
| LweI | GCATC | 1 cut(s) | 107 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MalI | GATC | 2 cut(s) | 118, 144 |
| MboI | GATC | 2 cut(s) | 116, 142 |
| MflI | RGATCY | 1 cut(s) | 142 |
| MluCI | AATT | 2 cut(s) | 9, 92 |
| Mph1103I | ATGCAT | 1 cut(s) | 196 |
| MslI | CAYNNNNRTG | 1 cut(s) | 103 |
| MspA1I | CMGCKG | 1 cut(s) | 112 |
| MspI | CCGG | 1 cut(s) | 14 |
| NdeII | GATC | 2 cut(s) | 116, 142 |
| NlaIII | CATG | 3 cut(s) | 55, 64, 194 |
| NsiI | ATGCAT | 1 cut(s) | 196 |
| PfeI | GAWTC | 2 cut(s) | 85, 122 |
| PkrI | GCNGC | 3 cut(s) | 21, 111, 114 |
| Ple19I | CGATCG | 1 cut(s) | 119 |
| PsuI | RGATCY | 1 cut(s) | 142 |
| PvuI | CGATCG | 1 cut(s) | 119 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 103 |
| SatI | GCNGC | 3 cut(s) | 20, 110, 113 |
| Sau3AI | GATC | 2 cut(s) | 116, 142 |
| SetI | ASST | 1 cut(s) | 161 |
| SfaNI | GCATC | 1 cut(s) | 107 |
| SgeI | CNNG | 8 cut(s) | 26, 35, 64, 73, 101, 158, 169, 193 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 103 |
| Sse9I | AATT | 2 cut(s) | 9, 92 |
| SsiI | CCGC | 3 cut(s) | 55, 77, 112 |
| SspMI | CTAG | 1 cut(s) | 89 |
| TasI | AATT | 2 cut(s) | 9, 92 |
| TauI | GCSGC | 1 cut(s) | 115 |
| TfiI | GAWTC | 2 cut(s) | 85, 122 |
| TseI | GCWGC | 2 cut(s) | 19, 109 |
| TspDTI | ATGAA | 2 cut(s) | 37, 77 |
| XapI | RAATTY | 2 cut(s) | 9, 92 |
| XbaI | TCTAGA | 1 cut(s) | 88 |
| XspI | CTAG | 1 cut(s) | 89 |
| Zsp2I | ATGCAT | 1 cut(s) | 196 |