mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52860 |
| fragaria_vesca | FvH4_2g03920 FvH4_2g03920 FvH4_4g11510 FvH4_7g29690 |
| malus_domestica | MD05G1096300.v1.1 MD10G1102600.v1.1 |
| prunus_persica | Prupe.8G140700_v2.0.a1 Prupe.8G140700_v2.0.a1 |
| pyrus_communis | pycom05g09510 pycom10g08840 |
| rosa_chinensis | RchiOBHm_Chr4g0408421 RchiOBHm_Chr6g0252941 RchiOBHm_Chr6g0252971 RchiOBHm_Chr6g0264541 |
| rosa_laevigata | RLG00000008652 |
| rosa_multiflora | Rmu_sc0000578.1_g000013 Rmu_sc0002560.1_g000003 Rmu_sc0016103.1_g000003 Rmu_sc0016103.1_g000007 Rmu_sc0033269.1_g000001 Rmu_ssc0000173.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352890 Rroxscaffold_7G00212260 |
| rosa_rugosa | Rorug04G0085600 Rorug04G0085700 Rorug05G0541700 Rorug05G0542300 |
| rosa_samantha | Rh4AG150400 Rh4BG147700 Rh4CG157700 Rh4CG230800 Rh4DG143300 Rh6AG056000 Rh6AG056300 Rh6AG133100 Rh6BG050300 Rh6BG050600 Rh6BG130700 Rh6CG048700 Rh6CG128900 Rh6DG044300 Rh6DG116100 Rh7AG370500 |
| rosa_wichuraiana | Rw0G009740 Rw4G012280 Rw6G005080 Rw6G005140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 57 |
| AgsI | TTSAA | 2 cut(s) | 30, 134 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 29, 61 |
| AluBI | AGCT | 2 cut(s) | 128, 137 |
| AluI | AGCT | 2 cut(s) | 128, 137 |
| AoxI | GGCC | 2 cut(s) | 57, 258 |
| ApeKI | GCWGC | 1 cut(s) | 137 |
| AspS9I | GGNCC | 2 cut(s) | 77, 258 |
| AvaII | GGWCC | 1 cut(s) | 77 |
| BbvI | GCAGC | 1 cut(s) | 124 |
| BccI | CCATC | 1 cut(s) | 249 |
| BisI | GCNGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 1 cut(s) | 139 |
| Bme18I | GGWCC | 1 cut(s) | 77 |
| BmgT120I | GGNCC | 2 cut(s) | 77, 258 |
| BmrI | ACTGGG | 1 cut(s) | 115 |
| BmsI | GCATC | 2 cut(s) | 73, 163 |
| BmuI | ACTGGG | 1 cut(s) | 115 |
| BpmI | CTGGAG | 1 cut(s) | 162 |
| Bsa29I | ATCGAT | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 1 cut(s) | 6 |
| Bse1I | ACTGG | 2 cut(s) | 110, 179 |
| BseCI | ATCGAT | 1 cut(s) | 300 |
| BseDI | CCNNGG | 1 cut(s) | 6 |
| BseGI | GGATG | 1 cut(s) | 260 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BseNI | ACTGG | 2 cut(s) | 110, 179 |
| BseXI | GCAGC | 1 cut(s) | 124 |
| BshFI | GGCC | 2 cut(s) | 59, 260 |
| BshVI | ATCGAT | 1 cut(s) | 300 |
| BsnI | GGCC | 2 cut(s) | 59, 260 |
| BspANI | GGCC | 2 cut(s) | 59, 260 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspDI | ATCGAT | 1 cut(s) | 300 |
| BsrI | ACTGG | 2 cut(s) | 110, 179 |
| BssECI | CCNNGG | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstF5I | GGATG | 1 cut(s) | 260 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstV1I | GCAGC | 1 cut(s) | 124 |
| Bsu15I | ATCGAT | 1 cut(s) | 300 |
| BsuRI | GGCC | 2 cut(s) | 59, 260 |
| BsuTUI | ATCGAT | 1 cut(s) | 300 |
| BtsCI | GGATG | 1 cut(s) | 260 |
| BtsIMutI | CAGTG | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 2 cut(s) | 77, 258 |
| ClaI | ATCGAT | 1 cut(s) | 300 |
| CviAII | CATG | 3 cut(s) | 161, 233, 279 |
| CviJI | RGCY | 4 cut(s) | 59, 128, 137, 260 |
| CviKI_1 | RGCY | 4 cut(s) | 59, 128, 137, 260 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| EaeI | YGGCCR | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 77 |
| FaeI | CATG | 3 cut(s) | 164, 236, 282 |
| FaiI | YATR | 3 cut(s) | 162, 234, 280 |
| FatI | CATG | 3 cut(s) | 160, 232, 278 |
| Fnu4HI | GCNGC | 1 cut(s) | 138 |
| FokI | GGATG | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 1 cut(s) | 138 |
| GluI | GCNGC | 1 cut(s) | 138 |
| GsuI | CTGGAG | 1 cut(s) | 162 |
| HaeIII | GGCC | 2 cut(s) | 59, 260 |
| Hin1II | CATG | 3 cut(s) | 164, 236, 282 |
| HindIII | AAGCTT | 1 cut(s) | 126 |
| HinfI | GANTC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 2 cut(s) | 247, 254 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 287 |
| HpyCH4V | TGCA | 1 cut(s) | 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| Hsp92II | CATG | 3 cut(s) | 164, 236, 282 |
| LmnI | GCTCC | 1 cut(s) | 151 |
| LpnPI | CCDG | 3 cut(s) | 91, 93, 192 |
| Lsp1109I | GCAGC | 1 cut(s) | 124 |
| LweI | GCATC | 2 cut(s) | 73, 163 |
| MaeIII | GTNAC | 1 cut(s) | 203 |
| MfeI | CAATTG | 1 cut(s) | 116 |
| MluCI | AATT | 2 cut(s) | 116, 290 |
| MnlI | CCTC | 4 cut(s) | 7, 98, 185, 186 |
| MseI | TTAA | 1 cut(s) | 198 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| MunI | CAATTG | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NlaIII | CATG | 3 cut(s) | 164, 236, 282 |
| PfeI | GAWTC | 1 cut(s) | 184 |
| PkrI | GCNGC | 1 cut(s) | 139 |
| PspPI | GGNCC | 2 cut(s) | 77, 258 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| SatI | GCNGC | 1 cut(s) | 138 |
| Sau96I | GGNCC | 2 cut(s) | 77, 258 |
| SetI | ASST | 5 cut(s) | 18, 72, 130, 139, 148 |
| SfaNI | GCATC | 2 cut(s) | 73, 163 |
| SinI | GGWCC | 1 cut(s) | 77 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sse9I | AATT | 2 cut(s) | 116, 290 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 116, 290 |
| TfiI | GAWTC | 1 cut(s) | 184 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TscAI | CASTG | 1 cut(s) | 186 |
| TseI | GCWGC | 1 cut(s) | 137 |
| TspDTI | ATGAA | 3 cut(s) | 54, 177, 267 |
| TspRI | CASTG | 1 cut(s) | 186 |
| VpaK11BI | GGWCC | 1 cut(s) | 77 |