mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52860 |
| fragaria_vesca | FvH4_2g03920 FvH4_2g03920 FvH4_4g11510 FvH4_7g29690 |
| malus_domestica | MD05G1096300.v1.1 MD10G1102600.v1.1 |
| prunus_persica | Prupe.8G140700_v2.0.a1 Prupe.8G140700_v2.0.a1 |
| pyrus_communis | pycom05g09510 pycom10g08840 |
| rosa_chinensis | RchiOBHm_Chr4g0408421 RchiOBHm_Chr6g0252941 RchiOBHm_Chr6g0252971 RchiOBHm_Chr6g0264541 |
| rosa_laevigata | RLG00000008652 |
| rosa_multiflora | Rmu_sc0000578.1_g000013 Rmu_sc0002560.1_g000003 Rmu_sc0016103.1_g000003 Rmu_sc0016103.1_g000007 Rmu_sc0033269.1_g000001 Rmu_ssc0000173.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352890 Rroxscaffold_7G00212260 |
| rosa_rugosa | Rorug04G0085600 Rorug04G0085700 Rorug05G0541700 Rorug05G0542300 |
| rosa_samantha | Rh4AG150400 Rh4BG147700 Rh4CG157700 Rh4CG230800 Rh4DG143300 Rh6AG056000 Rh6AG056300 Rh6AG133100 Rh6BG050300 Rh6BG050600 Rh6BG130700 Rh6CG048700 Rh6CG128900 Rh6DG044300 Rh6DG116100 Rh7AG370500 |
| rosa_wichuraiana | Rw0G009740 Rw4G012280 Rw6G005080 Rw6G005140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 216 |
| AcuI | CTGAAG | 1 cut(s) | 161 |
| AgsI | TTSAA | 1 cut(s) | 125 |
| AleI | CACNNNNGTG | 1 cut(s) | 27 |
| AluBI | AGCT | 6 cut(s) | 121, 164, 175, 181, 295, 328 |
| AluI | AGCT | 6 cut(s) | 121, 164, 175, 181, 295, 328 |
| AlwI | GGATC | 1 cut(s) | 216 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| BbvI | GCAGC | 1 cut(s) | 76 |
| BccI | CCATC | 1 cut(s) | 70 |
| BisI | GCNGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 91 |
| BmsI | GCATC | 2 cut(s) | 22, 30 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| Bse1I | ACTGG | 1 cut(s) | 312 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseMII | CTCAG | 1 cut(s) | 315 |
| BseNI | ACTGG | 1 cut(s) | 312 |
| BseXI | GCAGC | 1 cut(s) | 76 |
| BsmI | GAATGC | 1 cut(s) | 226 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| BspCNI | CTCAG | 1 cut(s) | 316 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BsrI | ACTGG | 1 cut(s) | 312 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssMI | GATC | 1 cut(s) | 208 |
| BssT1I | CCWWGG | 1 cut(s) | 277 |
| BstC8I | GCNNGC | 2 cut(s) | 107, 111 |
| BstDEI | CTNAG | 3 cut(s) | 6, 233, 324 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstNSI | RCATGY | 1 cut(s) | 72 |
| BstV1I | GCAGC | 1 cut(s) | 76 |
| BstX2I | RGATCY | 1 cut(s) | 208 |
| BstYI | RGATCY | 1 cut(s) | 208 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 2 cut(s) | 107, 111 |
| CviAII | CATG | 3 cut(s) | 61, 69, 102 |
| CviJI | RGCY | 8 cut(s) | 5, 89, 121, 164, 175, 181, 295, 328 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 89, 121, 164, 175, 181, 295, 328 |
| DdeI | CTNAG | 3 cut(s) | 6, 233, 324 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| Eco130I | CCWWGG | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 1 cut(s) | 161 |
| EcoT14I | CCWWGG | 1 cut(s) | 277 |
| ErhI | CCWWGG | 1 cut(s) | 277 |
| FaeI | CATG | 3 cut(s) | 64, 72, 105 |
| FaiI | YATR | 4 cut(s) | 62, 70, 103, 158 |
| FatI | CATG | 3 cut(s) | 60, 68, 101 |
| Fnu4HI | GCNGC | 1 cut(s) | 90 |
| FokI | GGATG | 1 cut(s) | 68 |
| Fsp4HI | GCNGC | 1 cut(s) | 90 |
| GluI | GCNGC | 1 cut(s) | 90 |
| Hin1II | CATG | 3 cut(s) | 64, 72, 105 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| Hpy188III | TCNNGA | 1 cut(s) | 256 |
| HpyCH4IV | ACGT | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 43, 199 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 3 cut(s) | 6, 233, 324 |
| HpySE526I | ACGT | 1 cut(s) | 202 |
| Hsp92II | CATG | 3 cut(s) | 64, 72, 105 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LmnI | GCTCC | 1 cut(s) | 292 |
| LpnPI | CCDG | 4 cut(s) | 123, 127, 162, 293 |
| Lsp1109I | GCAGC | 1 cut(s) | 76 |
| LweI | GCATC | 2 cut(s) | 22, 30 |
| MaeII | ACGT | 1 cut(s) | 202 |
| MalI | GATC | 1 cut(s) | 210 |
| MboI | GATC | 1 cut(s) | 208 |
| MboII | GAAGA | 1 cut(s) | 271 |
| MflI | RGATCY | 1 cut(s) | 208 |
| MnlI | CCTC | 2 cut(s) | 79, 199 |
| MseI | TTAA | 1 cut(s) | 272 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| Mva1269I | GAATGC | 1 cut(s) | 226 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NdeII | GATC | 1 cut(s) | 208 |
| NlaIII | CATG | 3 cut(s) | 64, 72, 105 |
| NspI | RCATGY | 1 cut(s) | 72 |
| OliI | CACNNNNGTG | 1 cut(s) | 27 |
| PctI | GAATGC | 1 cut(s) | 226 |
| PkrI | GCNGC | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SaqAI | TTAA | 1 cut(s) | 272 |
| SatI | GCNGC | 1 cut(s) | 90 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| SetI | ASST | 8 cut(s) | 123, 166, 177, 183, 205, 272, 297, 330 |
| SfaNI | GCATC | 2 cut(s) | 22, 30 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| SmlI | CTYRAG | 1 cut(s) | 329 |
| SmoI | CTYRAG | 1 cut(s) | 329 |
| StyI | CCWWGG | 1 cut(s) | 277 |
| TaiI | ACGT | 1 cut(s) | 205 |
| Tru1I | TTAA | 1 cut(s) | 272 |
| Tru9I | TTAA | 1 cut(s) | 272 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 1 cut(s) | 279 |
| XceI | RCATGY | 1 cut(s) | 72 |