XH domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g36270 FvH4_3g36300 |
| rosa_chinensis | RchiOBHm_Chr5g0065081 RchiOBHm_Chr5g0065111 |
| rosa_laevigata | RLG00000035750 RLG00000035757 |
| rosa_multiflora | Rmu_sc0002915.1_g000011 Rmu_sc0002915.1_g000016 Rmu_sc0006219.1_g000001 Rmu_sc0006219.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00016210 Rroxscaffold_1G00016240 |
| rosa_rugosa | Rorug05G0367600 Rorug05G0367900 Rorug05G0368000 |
| rosa_samantha | Rh5AG426200 Rh5AG426400 Rh5AG426500 Rh5BG441400 Rh5BG441700 Rh5CG464100 Rh5CG464300 Rh5DG453900 Rh5DG454200 |
| rosa_wichuraiana | Rw5G040040 Rw5G040060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 108 |
| AccII | CGCG | 1 cut(s) | 130 |
| AciI | CCGC | 1 cut(s) | 130 |
| AcoI | YGGCCR | 2 cut(s) | 5, 99 |
| AcsI | RAATTY | 1 cut(s) | 84 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 25, 108 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 169, 204 |
| AluI | AGCT | 2 cut(s) | 169, 204 |
| AoxI | GGCC | 2 cut(s) | 5, 99 |
| ApoI | RAATTY | 1 cut(s) | 84 |
| AspS9I | GGNCC | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 95, 105, 129, 139 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| BfmI | CTRYAG | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 1 cut(s) | 57 |
| BmiI | GGNNCC | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BmsI | GCATC | 1 cut(s) | 197 |
| BsaWI | WCCGGW | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 25, 108 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 25, 108 |
| BseMII | CTCAG | 1 cut(s) | 179 |
| Bsh1236I | CGCG | 1 cut(s) | 130 |
| BshFI | GGCC | 2 cut(s) | 7, 101 |
| BsiSI | CCGG | 5 cut(s) | 26, 69, 89, 98, 156 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 25, 108 |
| BsnI | GGCC | 2 cut(s) | 7, 101 |
| BspACI | CCGC | 1 cut(s) | 130 |
| BspANI | GGCC | 2 cut(s) | 7, 101 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspFNI | CGCG | 1 cut(s) | 130 |
| BspLI | GGNNCC | 1 cut(s) | 134 |
| BspQI | GCTCTTC | 1 cut(s) | 166 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 2 cut(s) | 114, 145 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstFNI | CGCG | 1 cut(s) | 130 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstNSI | RCATGY | 1 cut(s) | 120 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BstSFI | CTRYAG | 1 cut(s) | 192 |
| BstUI | CGCG | 1 cut(s) | 130 |
| BsuRI | GGCC | 2 cut(s) | 7, 101 |
| Cac8I | GCNNGC | 2 cut(s) | 114, 145 |
| Cfr13I | GGNCC | 1 cut(s) | 57 |
| CviAII | CATG | 2 cut(s) | 20, 117 |
| CviJI | RGCY | 7 cut(s) | 7, 101, 112, 159, 169, 180, 204 |
| CviKI_1 | RGCY | 7 cut(s) | 7, 101, 112, 159, 169, 180, 204 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| EaeI | YGGCCR | 2 cut(s) | 5, 99 |
| Eam1104I | CTCTTC | 1 cut(s) | 166 |
| EarI | CTCTTC | 1 cut(s) | 166 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| EcoRI | GAATTC | 1 cut(s) | 84 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| FaeI | CATG | 2 cut(s) | 23, 120 |
| FaiI | YATR | 2 cut(s) | 21, 118 |
| FatI | CATG | 2 cut(s) | 19, 116 |
| HaeIII | GGCC | 2 cut(s) | 7, 101 |
| HapII | CCGG | 5 cut(s) | 26, 69, 89, 98, 156 |
| Hin1II | CATG | 2 cut(s) | 23, 120 |
| HinfI | GANTC | 2 cut(s) | 41, 94 |
| HpaII | CCGG | 5 cut(s) | 26, 69, 89, 98, 156 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy99I | CGWCG | 3 cut(s) | 35, 49, 130 |
| HpyAV | CCTTC | 1 cut(s) | 48 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 3 cut(s) | 23, 116, 188 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| Hsp92II | CATG | 2 cut(s) | 23, 120 |
| LguI | GCTCTTC | 1 cut(s) | 166 |
| LmnI | GCTCC | 1 cut(s) | 71 |
| LpnPI | CCDG | 8 cut(s) | 39, 82, 102, 111, 129, 162, 169, 189 |
| LweI | GCATC | 1 cut(s) | 197 |
| MboII | GAAGA | 3 cut(s) | 47, 50, 153 |
| MluCI | AATT | 1 cut(s) | 84 |
| MlyI | GAGTC | 1 cut(s) | 88 |
| MmeI | TCCRAC | 1 cut(s) | 84 |
| MnlI | CCTC | 1 cut(s) | 146 |
| MspI | CCGG | 5 cut(s) | 26, 69, 89, 98, 156 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MvnI | CGCG | 1 cut(s) | 130 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NlaIII | CATG | 2 cut(s) | 23, 120 |
| NlaIV | GGNNCC | 1 cut(s) | 134 |
| NspI | RCATGY | 1 cut(s) | 120 |
| PciSI | GCTCTTC | 1 cut(s) | 166 |
| PfeI | GAWTC | 1 cut(s) | 41 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 108 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| PspN4I | GGNNCC | 1 cut(s) | 134 |
| PspPI | GGNCC | 1 cut(s) | 57 |
| SapI | GCTCTTC | 1 cut(s) | 166 |
| Sau96I | GGNCC | 1 cut(s) | 57 |
| SchI | GAGTC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SetI | ASST | 3 cut(s) | 59, 171, 206 |
| SfaNI | GCATC | 1 cut(s) | 197 |
| SfcI | CTRYAG | 1 cut(s) | 192 |
| SinI | GGWCC | 1 cut(s) | 57 |
| Sse9I | AATT | 1 cut(s) | 84 |
| SsiI | CCGC | 1 cut(s) | 130 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaqI | TCGA | 1 cut(s) | 44 |
| TasI | AATT | 1 cut(s) | 84 |
| TfiI | GAWTC | 1 cut(s) | 41 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 108 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| XapI | RAATTY | 1 cut(s) | 84 |
| XceI | RCATGY | 1 cut(s) | 120 |