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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1133000.v1.1 MD15G1111500.v1.1 |
| prunus_persica | Prupe.1G464100_v2.0.a1 Prupe.1G464100_v2.0.a1 Prupe.1G464100_v2.0.a1 Prupe.1G469700_v2.0.a1 Prupe.1G469700_v2.0.a1 Prupe.1G469700_v2.0.a1 Prupe.1G469700_v2.0.a1 Prupe.1G469700_v2.0.a1 |
| pyrus_communis | pycom07g25650 |
| rosa_chinensis | RchiOBHm_Chr1g0379631 |
| rosa_laevigata | RLG00000003047 RLG00000026374 RLG00000026377 |
| rosa_multiflora | Rmu_sc0007323.1_g000002 Rmu_sc0022226.1_g000002 Rmu_sc0034044.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00248410 |
| rosa_rugosa | Rorug01G0413100 Rorug01G0413800 Rorug05G0539800 Rorug05G0540300 Rorug05G0541000 |
| rosa_samantha | Rh1AG435900 Rh1AG436000 Rh1AG437500 Rh1BG393600 Rh1CG406300 Rh1DG424500 |
| rosa_wichuraiana | Rw1G038120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1958 |
| Acc36I | ACCTGC | 1 cut(s) | 1958 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 812 |
| AccII | CGCG | 1 cut(s) | 1912 |
| AclWI | GGATC | 6 cut(s) | 170, 246, 1508, 1521, 1529, 1711 |
| AcoI | YGGCCR | 1 cut(s) | 346 |
| AcuI | CTGAAG | 1 cut(s) | 525 |
| AfaI | GTAC | 4 cut(s) | 41, 343, 384, 458 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 812, 953, 956 |
| AflII | CTTAAG | 1 cut(s) | 353 |
| AflIII | ACRYGT | 3 cut(s) | 385, 583, 1182 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 249, 281 |
| AluBI | AGCT | 7 cut(s) | 482, 500, 675, 1108, 1528, 1727, 2066 |
| AluI | AGCT | 7 cut(s) | 482, 500, 675, 1108, 1528, 1727, 2066 |
| Alw21I | GWGCWC | 2 cut(s) | 677, 2068 |
| Alw26I | GTCTC | 1 cut(s) | 2132 |
| AlwI | GGATC | 6 cut(s) | 170, 246, 1508, 1521, 1529, 1711 |
| AoxI | GGCC | 1 cut(s) | 346 |
| ApeKI | GCWGC | 2 cut(s) | 1652, 1655 |
| AseI | ATTAAT | 1 cut(s) | 996 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 549 |
| AspLEI | GCGC | 1 cut(s) | 1912 |
| AspS9I | GGNCC | 1 cut(s) | 401 |
| AsuHPI | GGTGA | 3 cut(s) | 47, 122, 1676 |
| AsuNHI | GCTAGC | 1 cut(s) | 1745 |
| AvaII | GGWCC | 1 cut(s) | 401 |
| BalI | TGGCCA | 1 cut(s) | 348 |
| BamHI | GGATCC | 1 cut(s) | 1513 |
| BanII | GRGCYC | 2 cut(s) | 677, 2068 |
| BbsI | GAAGAC | 2 cut(s) | 90, 785 |
| Bbv12I | GWGCWC | 2 cut(s) | 677, 2068 |
| BbvI | GCAGC | 2 cut(s) | 1639, 1642 |
| BccI | CCATC | 6 cut(s) | 357, 471, 832, 997, 1007, 1910 |
| BcoDI | GTCTC | 1 cut(s) | 2132 |
| BfaI | CTAG | 6 cut(s) | 489, 537, 797, 1659, 1716, 1746 |
| BfrI | CTTAAG | 1 cut(s) | 353 |
| BfuAI | ACCTGC | 1 cut(s) | 1958 |
| BglII | AGATCT | 1 cut(s) | 2056 |
| BisI | GCNGC | 2 cut(s) | 1653, 1656 |
| BlsI | GCNGC | 2 cut(s) | 1654, 1657 |
| BmcAI | AGTACT | 2 cut(s) | 41, 458 |
| Bme18I | GGWCC | 1 cut(s) | 401 |
| BmgT120I | GGNCC | 1 cut(s) | 401 |
| BmiI | GGNNCC | 4 cut(s) | 901, 1033, 1482, 1515 |
| BmsI | GCATC | 6 cut(s) | 639, 1045, 1306, 1721, 1955, 2041 |
| BmtI | GCTAGC | 1 cut(s) | 1749 |
| BpiI | GAAGAC | 2 cut(s) | 90, 785 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2055 |
| BsaJI | CCNNGG | 1 cut(s) | 1517 |
| BsaWI | WCCGGW | 2 cut(s) | 1334, 1930 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 812, 953, 956 |
| Bse1I | ACTGG | 2 cut(s) | 349, 1537 |
| Bse3DI | GCAATG | 1 cut(s) | 1789 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2055 |
| BseDI | CCNNGG | 1 cut(s) | 1517 |
| BseGI | GGATG | 6 cut(s) | 25, 847, 1060, 1990, 2053, 2086 |
| BseJI | GATNNNNATC | 1 cut(s) | 2055 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 812, 953, 956 |
| BseMI | GCAATG | 1 cut(s) | 1789 |
| BseMII | CTCAG | 6 cut(s) | 69, 143, 481, 519, 1251, 1821 |
| BseNI | ACTGG | 2 cut(s) | 349, 1537 |
| BseRI | GAGGAG | 1 cut(s) | 1490 |
| BseXI | GCAGC | 2 cut(s) | 1639, 1642 |
| BsgI | GTGCAG | 1 cut(s) | 1986 |
| Bsh1236I | CGCG | 1 cut(s) | 1912 |
| BshFI | GGCC | 1 cut(s) | 348 |
| BsiHKAI | GWGCWC | 2 cut(s) | 677, 2068 |
| BsiSI | CCGG | 2 cut(s) | 1335, 1931 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 812, 953, 956 |
| BsmAI | GTCTC | 1 cut(s) | 2132 |
| BsnI | GGCC | 1 cut(s) | 348 |
| Bsp1286I | GDGCHC | 2 cut(s) | 677, 2068 |
| Bsp143I | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| BspANI | GGCC | 1 cut(s) | 348 |
| BspCNI | CTCAG | 6 cut(s) | 70, 142, 480, 520, 1252, 1822 |
| BspFNI | CGCG | 1 cut(s) | 1912 |
| BspHI | TCATGA | 1 cut(s) | 1824 |
| BspLI | GGNNCC | 4 cut(s) | 901, 1033, 1482, 1515 |
| BspMI | ACCTGC | 1 cut(s) | 1958 |
| BspOI | GCTAGC | 1 cut(s) | 1749 |
| BspPI | GGATC | 6 cut(s) | 170, 246, 1508, 1521, 1529, 1711 |
| BspTI | CTTAAG | 1 cut(s) | 353 |
| BsrDI | GCAATG | 1 cut(s) | 1789 |
| BsrI | ACTGG | 2 cut(s) | 349, 1537 |
| BssECI | CCNNGG | 1 cut(s) | 1517 |
| BssMI | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| BssT1I | CCWWGG | 1 cut(s) | 1517 |
| Bst4CI | ACNGT | 4 cut(s) | 318, 341, 1688, 1942 |
| BstAFI | CTTAAG | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 3 cut(s) | 363, 1743, 1747 |
| BstDEI | CTNAG | 8 cut(s) | 78, 129, 467, 528, 1134, 1260, 1830, 2060 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 954 |
| BstF5I | GGATG | 6 cut(s) | 25, 847, 1060, 1990, 2053, 2086 |
| BstFNI | CGCG | 1 cut(s) | 1912 |
| BstHHI | GCGC | 1 cut(s) | 1912 |
| BstKTI | GATC | 7 cut(s) | 178, 241, 925, 1516, 1524, 1706, 2059 |
| BstMAI | GTCTC | 1 cut(s) | 2132 |
| BstMBI | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 940, 1751, 1918, 1964 |
| BstNSI | RCATGY | 8 cut(s) | 365, 389, 656, 987, 1156, 1186, 1326, 2097 |
| BstUI | CGCG | 1 cut(s) | 1912 |
| BstV1I | GCAGC | 2 cut(s) | 1639, 1642 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 785 |
| BstX2I | RGATCY | 3 cut(s) | 1513, 1703, 2056 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2017 |
| BstYI | RGATCY | 3 cut(s) | 1513, 1703, 2056 |
| BsuRI | GGCC | 1 cut(s) | 348 |
| BtsCI | GGATG | 6 cut(s) | 25, 847, 1060, 1990, 2053, 2086 |
| BtsIMutI | CAGTG | 1 cut(s) | 162 |
| BveI | ACCTGC | 1 cut(s) | 1958 |
| Cac8I | GCNNGC | 3 cut(s) | 363, 1743, 1747 |
| CciI | TCATGA | 1 cut(s) | 1824 |
| CfoI | GCGC | 1 cut(s) | 1912 |
| Cfr13I | GGNCC | 1 cut(s) | 401 |
| Csp6I | GTAC | 4 cut(s) | 40, 342, 383, 457 |
| CviQI | GTAC | 4 cut(s) | 40, 342, 383, 457 |
| DdeI | CTNAG | 8 cut(s) | 78, 129, 467, 528, 1134, 1260, 1830, 2060 |
| DpnI | GATC | 7 cut(s) | 177, 240, 924, 1515, 1523, 1705, 2058 |
| DpnII | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| DraI | TTTAAA | 3 cut(s) | 580, 669, 1144 |
| EaeI | YGGCCR | 1 cut(s) | 346 |
| Ecl136II | GAGCTC | 2 cut(s) | 675, 2066 |
| Eco130I | CCWWGG | 1 cut(s) | 1517 |
| Eco24I | GRGCYC | 2 cut(s) | 677, 2068 |
| Eco47I | GGWCC | 1 cut(s) | 401 |
| Eco53kI | GAGCTC | 2 cut(s) | 675, 2066 |
| Eco57I | CTGAAG | 1 cut(s) | 525 |
| EcoICRI | GAGCTC | 2 cut(s) | 675, 2066 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 954 |
| EcoRI | GAATTC | 2 cut(s) | 1097, 1820 |
| EcoT14I | CCWWGG | 1 cut(s) | 1517 |
| EcoT22I | ATGCAT | 3 cut(s) | 654, 1216, 1714 |
| EcoT38I | GRGCYC | 2 cut(s) | 677, 2068 |
| ErhI | CCWWGG | 1 cut(s) | 1517 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2107, 2139 |
| FauNDI | CATATG | 2 cut(s) | 91, 972 |
| Fnu4HI | GCNGC | 2 cut(s) | 1653, 1656 |
| FokI | GGATG | 6 cut(s) | 32, 854, 1067, 1997, 2060, 2093 |
| FriOI | GRGCYC | 2 cut(s) | 677, 2068 |
| Fsp4HI | GCNGC | 2 cut(s) | 1653, 1656 |
| FspBI | CTAG | 6 cut(s) | 489, 537, 797, 1659, 1716, 1746 |
| GlaI | GCGC | 1 cut(s) | 1911 |
| GluI | GCNGC | 2 cut(s) | 1653, 1656 |
| HaeIII | GGCC | 1 cut(s) | 348 |
| HapII | CCGG | 2 cut(s) | 1335, 1931 |
| HhaI | GCGC | 1 cut(s) | 1912 |
| Hin6I | GCGC | 1 cut(s) | 1910 |
| HinP1I | GCGC | 1 cut(s) | 1910 |
| HindIII | AAGCTT | 2 cut(s) | 480, 1526 |
| HinfI | GANTC | 6 cut(s) | 11, 95, 113, 532, 1273, 1952 |
| HpaII | CCGG | 2 cut(s) | 1335, 1931 |
| HphI | GGTGA | 3 cut(s) | 47, 122, 1676 |
| Hpy166II | GTNNAC | 2 cut(s) | 625, 1938 |
| Hpy188III | TCNNGA | 3 cut(s) | 797, 1094, 1825 |
| Hpy8I | GTNNAC | 2 cut(s) | 625, 1938 |
| HpyAV | CCTTC | 2 cut(s) | 1701, 2133 |
| HpyCH4III | ACNGT | 4 cut(s) | 318, 341, 1688, 1942 |
| HpyCH4IV | ACGT | 1 cut(s) | 583 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 940, 1751, 1918, 1964 |
| HpyF3I | CTNAG | 8 cut(s) | 78, 129, 467, 528, 1134, 1260, 1830, 2060 |
| HpySE526I | ACGT | 1 cut(s) | 583 |
| HspAI | GCGC | 1 cut(s) | 1910 |
| Kzo9I | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| LmnI | GCTCC | 1 cut(s) | 1337 |
| Lsp1109I | GCAGC | 2 cut(s) | 1639, 1642 |
| LweI | GCATC | 6 cut(s) | 639, 1045, 1306, 1721, 1955, 2041 |
| MaeI | CTAG | 6 cut(s) | 489, 537, 797, 1659, 1716, 1746 |
| MaeII | ACGT | 1 cut(s) | 583 |
| MaeIII | GTNAC | 6 cut(s) | 442, 593, 733, 765, 883, 1202 |
| MalI | GATC | 7 cut(s) | 177, 240, 924, 1515, 1523, 1705, 2058 |
| MboI | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| MfeI | CAATTG | 4 cut(s) | 416, 678, 926, 1327 |
| MflI | RGATCY | 3 cut(s) | 1513, 1703, 2056 |
| MhlI | GDGCHC | 2 cut(s) | 677, 2068 |
| MlsI | TGGCCA | 1 cut(s) | 348 |
| MluNI | TGGCCA | 1 cut(s) | 348 |
| MlyI | GAGTC | 4 cut(s) | 5, 104, 541, 1961 |
| MmeI | TCCRAC | 2 cut(s) | 1145, 1373 |
| Mox20I | TGGCCA | 1 cut(s) | 348 |
| Mph1103I | ATGCAT | 3 cut(s) | 654, 1216, 1714 |
| MroXI | GAANNNNTTC | 1 cut(s) | 549 |
| MscI | TGGCCA | 1 cut(s) | 348 |
| Msp20I | TGGCCA | 1 cut(s) | 348 |
| MspCI | CTTAAG | 1 cut(s) | 353 |
| MspI | CCGG | 2 cut(s) | 1335, 1931 |
| MssI | GTTTAAAC | 1 cut(s) | 580 |
| MunI | CAATTG | 4 cut(s) | 416, 678, 926, 1327 |
| MvnI | CGCG | 1 cut(s) | 1912 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 940, 1751, 1918, 1964 |
| NdeI | CATATG | 2 cut(s) | 91, 972 |
| NdeII | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| NheI | GCTAGC | 1 cut(s) | 1745 |
| NlaIV | GGNNCC | 4 cut(s) | 901, 1033, 1482, 1515 |
| NsiI | ATGCAT | 3 cut(s) | 654, 1216, 1714 |
| NspI | RCATGY | 8 cut(s) | 365, 389, 656, 987, 1156, 1186, 1326, 2097 |
| PaeI | GCATGC | 1 cut(s) | 365 |
| PagI | TCATGA | 1 cut(s) | 1824 |
| PaqCI | CACCTGC | 1 cut(s) | 1958 |
| PciI | ACATGT | 2 cut(s) | 385, 1182 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 589 |
| PdmI | GAANNNNTTC | 1 cut(s) | 549 |
| PfeI | GAWTC | 2 cut(s) | 113, 1273 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 812 |
| PkrI | GCNGC | 2 cut(s) | 1654, 1657 |
| PleI | GAGTC | 4 cut(s) | 5, 103, 540, 1960 |
| PmeI | GTTTAAAC | 1 cut(s) | 580 |
| PpsI | GAGTC | 4 cut(s) | 5, 103, 540, 1960 |
| PscI | ACATGT | 2 cut(s) | 385, 1182 |
| PshBI | ATTAAT | 1 cut(s) | 996 |
| Psp124BI | GAGCTC | 2 cut(s) | 677, 2068 |
| PspN4I | GGNNCC | 4 cut(s) | 901, 1033, 1482, 1515 |
| PspPI | GGNCC | 1 cut(s) | 401 |
| PsuI | RGATCY | 3 cut(s) | 1513, 1703, 2056 |
| RsaI | GTAC | 4 cut(s) | 41, 343, 384, 458 |
| RsaNI | GTAC | 4 cut(s) | 40, 342, 383, 457 |
| SacI | GAGCTC | 2 cut(s) | 677, 2068 |
| SatI | GCNGC | 2 cut(s) | 1653, 1656 |
| Sau3AI | GATC | 7 cut(s) | 175, 238, 922, 1513, 1521, 1703, 2056 |
| Sau96I | GGNCC | 1 cut(s) | 401 |
| ScaI | AGTACT | 2 cut(s) | 41, 458 |
| SchI | GAGTC | 4 cut(s) | 5, 104, 541, 1961 |
| SduI | GDGCHC | 2 cut(s) | 677, 2068 |
| SfaNI | GCATC | 6 cut(s) | 639, 1045, 1306, 1721, 1955, 2041 |
| SinI | GGWCC | 1 cut(s) | 401 |
| SmlI | CTYRAG | 1 cut(s) | 353 |
| SmoI | CTYRAG | 1 cut(s) | 353 |
| SphI | GCATGC | 1 cut(s) | 365 |
| SspI | AATATT | 4 cut(s) | 825, 862, 963, 1799 |
| SspMI | CTAG | 6 cut(s) | 489, 537, 797, 1659, 1716, 1746 |
| SstI | GAGCTC | 2 cut(s) | 677, 2068 |
| StyI | CCWWGG | 1 cut(s) | 1517 |
| TaaI | ACNGT | 4 cut(s) | 318, 341, 1688, 1942 |
| TaiI | ACGT | 1 cut(s) | 586 |
| TaqI | TCGA | 1 cut(s) | 1198 |
| TatI | WGTACW | 3 cut(s) | 39, 382, 456 |
| TfiI | GAWTC | 2 cut(s) | 113, 1273 |
| TscAI | CASTG | 1 cut(s) | 169 |
| TseI | GCWGC | 2 cut(s) | 1652, 1655 |
| TspDTI | ATGAA | 9 cut(s) | 17, 300, 959, 1653, 1686, 1800, 1813, 2001, 2115 |
| TspGWI | ACGGA | 2 cut(s) | 235, 1151 |
| TspRI | CASTG | 1 cut(s) | 169 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 812 |
| Vha464I | CTTAAG | 1 cut(s) | 353 |
| VpaK11BI | GGWCC | 1 cut(s) | 401 |
| VspI | ATTAAT | 1 cut(s) | 996 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 954 |
| XbaI | TCTAGA | 1 cut(s) | 796 |
| XceI | RCATGY | 8 cut(s) | 365, 389, 656, 987, 1156, 1186, 1326, 2097 |
| XmnI | GAANNNNTTC | 1 cut(s) | 549 |
| XspI | CTAG | 6 cut(s) | 489, 537, 797, 1659, 1716, 1746 |
| ZrmI | AGTACT | 2 cut(s) | 41, 458 |
| Zsp2I | ATGCAT | 3 cut(s) | 654, 1216, 1714 |