Rorug05G0574000

Belongs to the glycosyl hydrolase 13 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001929
Physical Location & Seq
Reverse (-)
76902727 .. 76906813
4087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0574000.1

Sequence Viewer

Length: 2097 bp
ATGTGGGATCTGAATGAGCCTCCTAATCAGGGACGCGTGGAGGACGACGGCACCACCTCGGCCGACGGCAACGGAAAAAGTGGCTGCAAGATATTCGGGGTCTGGTTCACGGACATTGCTGATTCGCAACCCGTGACCCGACAGTTCTTCCCGGTAGATGTATCCTCCGAAATGGAACTCCCGCCTGGAGGTGGCGTTGCCGCCGGGCCGGTTGCTTCTTCCTCTTCTTCATCATCACCTGTTCAGTGGAAGTGTGATTCACCTGTTCAGTGGAAGTATGATGTGTTCTTGAGTTTCAGGGGTCCAGACACTCGAAGGAGTATCACCTCTTATCTATACTATCGACTGCAGAGGAGGGGAATTAAAACATTCATGGATGATCCAGATCTTCAAGTAGGGGATGTGATTTCTCCCGCTCTCCTAAAGGCAATTGAAGGATCAAGGTTTGCAATTGTTGTTCTGTCGGAAAACTATGCTCATTCTACTTGGTGTTTGGAGGAACTTACAAAGATTTGTGAGTGCATGGAAGGAAGCAACAGAATTTTTCCACTTTTCTATAATGTGGAACCATCTGATGTACGGTACCGAACGAAGAGTTTCGGAGAAGCTTTTAATAAGCATGCAAGCTATGGGCGACACACATTACAGATTGTGCGGCGGTGGAATGATGCTTTAAACAAAGTGTCCAGTTTCTCTGGGTGGCATACAAAGAATTATAAGACTGATAGAGAACTTGTAGACGCAATTGTGGATTTTGTGTGCAATAAAATACAACCTACTGACACTGAGTTTACAATGTCTTCCGGAGATTTTGATGCATATGAAGTAACAAGAAAAGCCATAGATGAGGTTATGAAGGTGCTAAAAGATAAAGATGACGAGGTCACTGCGGATGGTGTCCACGGCATGGGAGGCGTCGGCAAGACAAGCATGGTAAAACACGTCGCTGAACAATTCTGCAAAAATGGGACTTCTCATCATGTGATTATGACTGTTGTATCCCAGAGCCCTGACTTGACAAAAATTCAAGGCACATTGGCGGGGCCGAGCGGGTGTTGTACTGCGAATAGTAGTTGTACTGCAAGTGTCAGAATTAAGAGAGTGCGGCCGCCAGGGCTGAAGCTGCCGCCGTCAATGGTGAGGGTTCCGGTGGTTGACAATGGATGCTCGACTAGGGACATTTTGAGGGACTTCGCGCCAGAAGAAGAGAGGGAGTCGTCGGAAATGGTGCAGAGAAGGTTTGGTTCCTTTTCCTCGTCTTCTTCTGATGAAGAAGAAGAACTAGAAGAAGAAGTTGAAGAAGGAGAGGATGTTGACTTTTCCAGCACTACCGCAGAGATTTCCAGTCCAAATGGAAGGTTTTCGCCGAATGGGAAGCCTAAGCTTACTGTCACTAGTTGGGAAAAGGGTGATTTGCTCGGCAGCGGCTCTTTTGGGTCTGTGTATGAAGGAATTTCTGATGGCGGATGCTTCATTGCTGTCAAGGAAGTTTCCTTGCTTGATCAAGGAAGCCTGGGGAGGCAAAGAGTTTCTCAACTTGAACAGGAGATTGCTCTTCTGAGTCAGTTTGAACATGAGAACATAGTTCAGTATTATGGCACACAAAAGGTCGTTAATCGTAAGAGTCAAGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTGTTGGAGATGTTAACTGGGATGGTTCCATACTCTAATCTCGAATGGATGGAGGCATTATGGAAAATTGGAAAGGGGGAGCCCCCTCTGGTTCCTGATTCTCTTTCAAGAGAGGCACAAGATTTCATCCATCTATGCTTACAAGTTAAGCCAGATAATCGTCCCACTGCTGCTGAGCTTTTAAAACATCCATTTGTAAATAAGCCCCTTCCTCCCACGTCTTCTGGATCAGTATCTCCTTACAATCACCACAGGCAGGCTCTATTCGACCCAAAGAAGCAGGACGGCAACTCATCCATGTTCTACAATTTGCTTTGGAATCCCGTGTTCAGCCATAAAATCTTGCCTTACGCTGGTGGAGTGCATGCTTGTTATAACTTCAGTGATTTTCAAGGTCTACGCCAGATCTGGCAATGGGATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 ko04973 map00500 map01100 map04973
Pfam Domains
Protein Families
Alpha-amyl_C2 Alpha-amylase

Protein Analysis

698

Amino Acids

77.6

Weight (kDa)

5.28

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 92 - 263 7.2e-46 TIR domain
TIR_2 PF13676 95 - 190 2.2e-15 TIR domain
Pkinase PF00069 468 - 534 2.4e-08 Protein kinase domain
Pkinase PF00069 541 - 623 6.2e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 545 - 619 1.1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 717, 2046
Acc65I GGTACC 1 cut(s) 582
AccB1I GGYRCC 2 cut(s) 50, 582
AccB7I CCANNNNNTGG 1 cut(s) 907
AccBSI CCGCTC 2 cut(s) 416, 1050
AccI GTMKAC 2 cut(s) 738, 2068
AccII CGCG 2 cut(s) 36, 1196
AccIII TCCGGA 1 cut(s) 803
AclWI GGATC 4 cut(s) 15, 374, 445, 1906
AcoI YGGCCR 2 cut(s) 60, 1106
AcsI RAATTY 3 cut(s) 540, 1023, 1452
AcuI CTGAAG 2 cut(s) 1139, 2035
AcyI GRCGYC 1 cut(s) 915
AfaI GTAC 5 cut(s) 579, 584, 1060, 1078, 1669
AfiI CCNNNNNNNGG 6 cut(s) 29, 188, 191, 907, 1927, 2024
AflIII ACRYGT 2 cut(s) 34, 940
AgsI TTSAA 8 cut(s) 392, 434, 1028, 1298, 1541, 1571, 1779, 2063
AhlI ACTAGT 1 cut(s) 1394
AjiI CACGTC 2 cut(s) 943, 1890
AjnI CCWGG 3 cut(s) 184, 1111, 1512
AluBI AGCT 6 cut(s) 608, 627, 1123, 1384, 1646, 1849
AluI AGCT 6 cut(s) 608, 627, 1123, 1384, 1646, 1849
AlwI GGATC 4 cut(s) 15, 374, 445, 1906
Aor13HI TCCGGA 1 cut(s) 803
AoxI GGCC 5 cut(s) 60, 206, 1043, 1106, 1636
ApeKI GCWGC 4 cut(s) 84, 1123, 1422, 1841
ApoI RAATTY 3 cut(s) 540, 1023, 1452
Asp700I GAANNNNTTC 2 cut(s) 596, 1360
Asp718I GGTACC 1 cut(s) 582
AspLEI GCGC 1 cut(s) 1198
AspS9I GGNCC 3 cut(s) 206, 302, 1043
AsuC2I CCSGG 2 cut(s) 152, 205
AsuHPI GGTGA 6 cut(s) 228, 252, 316, 1150, 1421, 1910
AvaII GGWCC 1 cut(s) 302
BaeI ACNNNNGTAYC 2 cut(s) 981, 1014
BanI GGYRCC 2 cut(s) 50, 582
BanII GRGCYC 2 cut(s) 1010, 1755
BbsI GAAGAC 3 cut(s) 792, 1251, 1884
BbvI GCAGC 4 cut(s) 71, 1110, 1434, 1828
BccI CCATC 6 cut(s) 577, 887, 1454, 1687, 1714, 1809
BceAI ACGGC 5 cut(s) 64, 82, 919, 1114, 1972
BcgI CGANNNNNNTGC 4 cut(s) 76, 110, 869, 903
BciT130I CCWGG 3 cut(s) 186, 1113, 1514
BciVI GTATCC 2 cut(s) 172, 1009
BclI TGATCA 1 cut(s) 1501
BcnI CCSGG 2 cut(s) 152, 205
BcuI ACTAGT 1 cut(s) 1394
BfaI CTAG 3 cut(s) 1173, 1283, 1395
BfmI CTRYAG 1 cut(s) 347
BfuI GTATCC 2 cut(s) 172, 1009
BglI GCCNNNNNGGC 1 cut(s) 1114
BglII AGATCT 2 cut(s) 385, 2076
BlpI GCTNAGC 1 cut(s) 1845
Bme1390I CCNGG 5 cut(s) 152, 186, 205, 1113, 1514
Bme18I GGWCC 1 cut(s) 302
BmgBI CACGTC 2 cut(s) 943, 1890
BmgT120I GGNCC 3 cut(s) 206, 302, 1043
BmrFI CCNGG 5 cut(s) 152, 186, 205, 1113, 1514
BmrI ACTGGG 1 cut(s) 1698
BmsI GCATC 4 cut(s) 658, 805, 1154, 1457
BmuI ACTGGG 1 cut(s) 1698
BpiI GAAGAC 3 cut(s) 792, 1251, 1884
BpmI CTGGAG 1 cut(s) 207
Bpu10I CCTNAGC 1 cut(s) 1380
Bpu1102I GCTNAGC 1 cut(s) 1845
BpuEI CTTGAG 1 cut(s) 310
BpuMI CCSGG 2 cut(s) 152, 205
BsaBI GATNNNNATC 2 cut(s) 384, 1903
BsaHI GRCGYC 1 cut(s) 915
BsaJI CCNNGG 4 cut(s) 57, 901, 1112, 1513
BsaWI WCCGGW 2 cut(s) 803, 1147
BsaXI ACNNNNNCTCC 4 cut(s) 180, 210, 1296, 1326
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 188, 191, 907, 1927, 2024
Bse118I RCCGGY 1 cut(s) 208
Bse1I ACTGG 3 cut(s) 687, 1344, 1693
Bse3DI GCAATG 3 cut(s) 114, 1473, 2090
Bse8I GATNNNNATC 2 cut(s) 384, 1903
BseAI TCCGGA 1 cut(s) 803
BseBI CCWGG 3 cut(s) 186, 1113, 1514
BseDI CCNNGG 4 cut(s) 57, 901, 1112, 1513
BseJI GATNNNNATC 2 cut(s) 384, 1903
BseLI CCNNNNNNNGG 6 cut(s) 29, 188, 191, 907, 1927, 2024
BseMI GCAATG 3 cut(s) 114, 1473, 2090
BseMII CTCAG 3 cut(s) 777, 1550, 1836
BseNI ACTGG 3 cut(s) 687, 1344, 1693
BseRI GAGGAG 1 cut(s) 367
BseX3I CGGCCG 2 cut(s) 60, 1106
BseXI GCAGC 4 cut(s) 71, 1110, 1434, 1828
BsgI GTGCAG 1 cut(s) 1250
Bsh1236I CGCG 2 cut(s) 36, 1196
Bsh1285I CGRYCG 2 cut(s) 63, 1109
BshFI GGCC 5 cut(s) 62, 208, 1045, 1108, 1638
BshNI GGYRCC 2 cut(s) 50, 582
BsiEI CGRYCG 2 cut(s) 63, 1109
BsiSI CCGG 5 cut(s) 152, 204, 209, 804, 1148
BslFI GGGAC 5 cut(s) 45, 982, 1190, 1202, 1818
BslI CCNNNNNNNGG 6 cut(s) 29, 188, 191, 907, 1927, 2024
BsmFI GGGAC 5 cut(s) 45, 982, 1190, 1202, 1818
BsnI GGCC 5 cut(s) 62, 208, 1045, 1108, 1638
Bsp1286I GDGCHC 2 cut(s) 1010, 1755
Bsp13I TCCGGA 1 cut(s) 803
Bsp143I GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
Bsp1720I GCTNAGC 1 cut(s) 1845
BspANI GGCC 5 cut(s) 62, 208, 1045, 1108, 1638
BspCNI CTCAG 3 cut(s) 778, 1551, 1837
BspEI TCCGGA 1 cut(s) 803
BspFNI CGCG 2 cut(s) 36, 1196
BspMAI CTGCAG 1 cut(s) 351
BspPI GGATC 4 cut(s) 15, 374, 445, 1906
BspQI GCTCTTC 1 cut(s) 1560
BspT107I GGYRCC 2 cut(s) 50, 582
BsrBI CCGCTC 2 cut(s) 416, 1050
BsrDI GCAATG 3 cut(s) 114, 1473, 2090
BsrFI RCCGGY 1 cut(s) 208
BsrI ACTGG 3 cut(s) 687, 1344, 1693
BssAI RCCGGY 1 cut(s) 208
BssECI CCNNGG 4 cut(s) 57, 901, 1112, 1513
BssMI GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
BssNI GRCGYC 1 cut(s) 915
Bst2UI CCWGG 3 cut(s) 186, 1113, 1514
Bst4CI ACNGT 5 cut(s) 144, 582, 994, 1390, 1672
Bst6I CTCTTC 4 cut(s) 229, 587, 1200, 1560
BstACI GRCGYC 1 cut(s) 915
BstC8I GCNNGC 4 cut(s) 621, 625, 1929, 2037
BstDEI CTNAG 4 cut(s) 786, 1380, 1559, 1845
BstDSI CCRYGG 1 cut(s) 901
BstFNI CGCG 2 cut(s) 36, 1196
BstHHI GCGC 1 cut(s) 1198
BstKTI GATC 7 cut(s) 10, 382, 388, 440, 1504, 1901, 2079
BstMBI GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
BstMCI CGRYCG 2 cut(s) 63, 1109
BstMWI GCNNNNNNNGC 4 cut(s) 912, 927, 1114, 1123
BstNI CCWGG 3 cut(s) 186, 1113, 1514
BstNSI RCATGY 2 cut(s) 623, 2039
BstSCI CCNGG 5 cut(s) 150, 184, 203, 1111, 1512
BstSFI CTRYAG 1 cut(s) 347
BstUI CGCG 2 cut(s) 36, 1196
BstV1I GCAGC 4 cut(s) 71, 1110, 1434, 1828
BstV2I GAAGAC 3 cut(s) 792, 1251, 1884
BstX2I RGATCY 3 cut(s) 7, 385, 2076
BstYI RGATCY 3 cut(s) 7, 385, 2076
BstZI CGGCCG 2 cut(s) 60, 1106
BsuI GTATCC 2 cut(s) 172, 1009
BsuRI GGCC 5 cut(s) 62, 208, 1045, 1108, 1638
BtgI CCRYGG 1 cut(s) 901
BtrI CACGTC 2 cut(s) 943, 1890
BtsI GCAGTG 2 cut(s) 885, 1836
BtsIMutI CAGTG 6 cut(s) 251, 275, 783, 885, 1836, 2059
Cac8I GCNNGC 4 cut(s) 621, 625, 1929, 2037
CciNI GCGGCCGC 1 cut(s) 1106
CfoI GCGC 1 cut(s) 1198
Cfr10I RCCGGY 1 cut(s) 208
Cfr13I GGNCC 3 cut(s) 206, 302, 1043
CseI GACGC 3 cut(s) 42, 749, 904
Csp6I GTAC 5 cut(s) 578, 583, 1059, 1077, 1668
CviAII CATG 9 cut(s) 373, 523, 620, 907, 931, 980, 1574, 1969, 2036
CviQI GTAC 5 cut(s) 578, 583, 1059, 1077, 1668
DdeI CTNAG 4 cut(s) 786, 1380, 1559, 1845
DpnI GATC 7 cut(s) 9, 381, 387, 439, 1503, 1900, 2078
DpnII GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
DraI TTTAAA 2 cut(s) 675, 1854
EaeI YGGCCR 2 cut(s) 60, 1106
EagI CGGCCG 2 cut(s) 60, 1106
Eam1104I CTCTTC 4 cut(s) 229, 587, 1200, 1560
EarI CTCTTC 4 cut(s) 229, 587, 1200, 1560
EciI GGCGGA 1 cut(s) 1479
EclXI CGGCCG 2 cut(s) 60, 1106
Eco24I GRGCYC 2 cut(s) 1010, 1755
Eco47I GGWCC 1 cut(s) 302
Eco52I CGGCCG 2 cut(s) 60, 1106
Eco57I CTGAAG 2 cut(s) 1139, 2035
EcoRII CCWGG 3 cut(s) 184, 1111, 1512
EcoT22I ATGCAT 1 cut(s) 820
EcoT38I GRGCYC 2 cut(s) 1010, 1755
FaeI CATG 9 cut(s) 376, 526, 623, 910, 934, 983, 1577, 1972, 2039
FaqI GGGAC 5 cut(s) 45, 982, 1190, 1202, 1818
FatI CATG 9 cut(s) 372, 522, 619, 906, 930, 979, 1573, 1968, 2035
FauI CCCGC 4 cut(s) 189, 421, 1033, 1043
FauNDI CATATG 1 cut(s) 820
FbaI TGATCA 1 cut(s) 1501
FblI GTMKAC 2 cut(s) 738, 2068
FriOI GRGCYC 2 cut(s) 1010, 1755
FspBI CTAG 3 cut(s) 1173, 1283, 1395
GlaI GCGC 1 cut(s) 1197
GsuI CTGGAG 1 cut(s) 207
HaeIII GGCC 5 cut(s) 62, 208, 1045, 1108, 1638
HapII CCGG 5 cut(s) 152, 204, 209, 804, 1148
HgaI GACGC 3 cut(s) 42, 749, 904
HhaI GCGC 1 cut(s) 1198
Hin1I GRCGYC 1 cut(s) 915
Hin1II CATG 9 cut(s) 376, 526, 623, 910, 934, 983, 1577, 1972, 2039
Hin6I GCGC 1 cut(s) 1196
HinP1I GCGC 1 cut(s) 1196
HincII GTYRAC 3 cut(s) 1156, 1315, 1686
HindII GTYRAC 3 cut(s) 1156, 1315, 1686
HindIII AAGCTT 2 cut(s) 606, 1382
HinfI GANTC 8 cut(s) 122, 257, 1214, 1561, 1624, 1657, 1769, 1990
HpaI GTTAAC 1 cut(s) 1686
HpaII CCGG 5 cut(s) 152, 204, 209, 804, 1148
HphI GGTGA 6 cut(s) 228, 252, 316, 1150, 1421, 1910
Hpy166II GTNNAC 8 cut(s) 108, 739, 792, 901, 1156, 1315, 1686, 2069
Hpy188III TCNNGA 8 cut(s) 289, 305, 383, 804, 1712, 1766, 1779, 1896
Hpy8I GTNNAC 8 cut(s) 108, 739, 792, 901, 1156, 1315, 1686, 2069
Hpy99I CGWCG 5 cut(s) 50, 68, 920, 947, 1222
HpyCH4III ACNGT 5 cut(s) 144, 582, 994, 1390, 1672
HpyCH4IV ACGT 2 cut(s) 942, 1889
HpyF10VI GCNNNNNNNGC 4 cut(s) 912, 927, 1114, 1123
HpyF3I CTNAG 4 cut(s) 786, 1380, 1559, 1845
HpySE526I ACGT 2 cut(s) 942, 1889
Hsp92I GRCGYC 1 cut(s) 915
Hsp92II CATG 9 cut(s) 376, 526, 623, 910, 934, 983, 1577, 1972, 2039
HspAI GCGC 1 cut(s) 1196
Kpn2I TCCGGA 1 cut(s) 803
KpnI GGTACC 1 cut(s) 586
Ksp22I TGATCA 1 cut(s) 1501
KspAI GTTAAC 1 cut(s) 1686
Kzo9I GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
LguI GCTCTTC 1 cut(s) 1560
LmnI GCTCC 1 cut(s) 1750
Lsp1109I GCAGC 4 cut(s) 71, 1110, 1434, 1828
LweI GCATC 4 cut(s) 658, 805, 1154, 1457
MaeI CTAG 3 cut(s) 1173, 1283, 1395
MaeII ACGT 2 cut(s) 942, 1889
MaeIII GTNAC 4 cut(s) 133, 826, 883, 1390
MalI GATC 7 cut(s) 9, 381, 387, 439, 1503, 1900, 2078
MbiI CCGCTC 2 cut(s) 416, 1050
MboI GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
MfeI CAATTG 3 cut(s) 429, 450, 744
MflI RGATCY 3 cut(s) 7, 385, 2076
MhlI GDGCHC 2 cut(s) 1010, 1755
MluI ACGCGT 1 cut(s) 34
MlyI GAGTC 4 cut(s) 1223, 1570, 1633, 1666
MmeI TCCRAC 3 cut(s) 444, 1200, 1656
Mph1103I ATGCAT 1 cut(s) 820
MroI TCCGGA 1 cut(s) 803
MroXI GAANNNNTTC 2 cut(s) 596, 1360
MseI TTAA 8 cut(s) 363, 612, 674, 1095, 1614, 1685, 1818, 1853
MspA1I CMGCKG 2 cut(s) 1425, 1646
MspI CCGG 5 cut(s) 152, 204, 209, 804, 1148
MspR9I CCNGG 5 cut(s) 152, 186, 205, 1113, 1514
MunI CAATTG 3 cut(s) 429, 450, 744
MvaI CCWGG 3 cut(s) 186, 1113, 1514
MvnI CGCG 2 cut(s) 36, 1196
MwoI GCNNNNNNNGC 4 cut(s) 912, 927, 1114, 1123
NciI CCSGG 2 cut(s) 152, 205
NdeI CATATG 1 cut(s) 820
NdeII GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
NlaIII CATG 9 cut(s) 376, 526, 623, 910, 934, 983, 1577, 1972, 2039
NmeAIII GCCGAG 3 cut(s) 38, 1071, 1398
NmuCI GTSAC 3 cut(s) 133, 883, 1390
NotI GCGGCCGC 1 cut(s) 1106
NsiI ATGCAT 1 cut(s) 820
NspI RCATGY 2 cut(s) 623, 2039
PaeI GCATGC 2 cut(s) 623, 2039
PciSI GCTCTTC 1 cut(s) 1560
PdmI GAANNNNTTC 2 cut(s) 596, 1360
PfeI GAWTC 4 cut(s) 122, 257, 1769, 1990
PflFI GACNNNGTC 1 cut(s) 881
PflMI CCANNNNNTGG 1 cut(s) 907
PleI GAGTC 4 cut(s) 1222, 1569, 1632, 1665
PpsI GAGTC 4 cut(s) 1222, 1569, 1632, 1665
PsiI TTATAA 2 cut(s) 717, 2046
Psp6I CCWGG 3 cut(s) 184, 1111, 1512
PspGI CCWGG 3 cut(s) 184, 1111, 1512
PspPI GGNCC 3 cut(s) 206, 302, 1043
PsrI GAACNNNNNNTAC 2 cut(s) 269, 301
PstI CTGCAG 1 cut(s) 351
PsuI RGATCY 3 cut(s) 7, 385, 2076
PsyI GACNNNGTC 1 cut(s) 881
PvuII CAGCTG 1 cut(s) 1646
RsaI GTAC 5 cut(s) 579, 584, 1060, 1078, 1669
RsaNI GTAC 5 cut(s) 578, 583, 1059, 1077, 1668
SapI GCTCTTC 1 cut(s) 1560
SaqAI TTAA 8 cut(s) 363, 612, 674, 1095, 1614, 1685, 1818, 1853
Sau3AI GATC 7 cut(s) 7, 379, 385, 437, 1501, 1898, 2076
Sau96I GGNCC 3 cut(s) 206, 302, 1043
SchI GAGTC 4 cut(s) 1223, 1570, 1633, 1666
ScrFI CCNGG 5 cut(s) 152, 186, 205, 1113, 1514
SduI GDGCHC 2 cut(s) 1010, 1755
SfaNI GCATC 4 cut(s) 658, 805, 1154, 1457
SfcI CTRYAG 1 cut(s) 347
SinI GGWCC 1 cut(s) 302
SmlI CTYRAG 1 cut(s) 289
SmoI CTYRAG 1 cut(s) 289
SpeI ACTAGT 1 cut(s) 1394
SphI GCATGC 2 cut(s) 623, 2039
SspMI CTAG 3 cut(s) 1173, 1283, 1395
StyD4I CCNGG 5 cut(s) 150, 184, 203, 1111, 1512
TaaI ACNGT 5 cut(s) 144, 582, 994, 1390, 1672
TaiI ACGT 2 cut(s) 945, 1892
TaqI TCGA 5 cut(s) 313, 343, 1169, 1713, 1938
TatI WGTACW 3 cut(s) 1058, 1076, 1667
TauI GCSGC 6 cut(s) 203, 658, 1108, 1111, 1129, 1428
TfiI GAWTC 4 cut(s) 122, 257, 1769, 1990
Tru1I TTAA 8 cut(s) 363, 612, 674, 1095, 1614, 1685, 1818, 1853
Tru9I TTAA 8 cut(s) 363, 612, 674, 1095, 1614, 1685, 1818, 1853
TscAI CASTG 6 cut(s) 251, 275, 790, 892, 1843, 2059
TseFI GTSAC 3 cut(s) 133, 883, 1390
TseI GCWGC 4 cut(s) 84, 1123, 1422, 1841
Tsp45I GTSAC 3 cut(s) 133, 883, 1390
TspDTI ATGAA 8 cut(s) 219, 361, 837, 869, 1284, 1461, 1462, 1786
TspGWI ACGGA 2 cut(s) 87, 125
TspRI CASTG 6 cut(s) 251, 275, 790, 892, 1843, 2059
Tth111I GACNNNGTC 1 cut(s) 881
Van91I CCANNNNNTGG 1 cut(s) 907
VpaK11BI GGWCC 1 cut(s) 302
XapI RAATTY 3 cut(s) 540, 1023, 1452
XceI RCATGY 2 cut(s) 623, 2039
XcmI CCANNNNNNNNNTGG 1 cut(s) 1650
XmiI GTMKAC 2 cut(s) 738, 2068
XmnI GAANNNNTTC 2 cut(s) 596, 1360
XspI CTAG 3 cut(s) 1173, 1283, 1395
Zsp2I ATGCAT 1 cut(s) 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.