Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005001

Physical Location & Seq

Genomic Coordinates Reverse (-)

24598051 .. 24602944

Gene Structure 4894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0261300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGTCAGAAAGTGCAGTCAGCTTTCTACTGAACAAGATCTCTCCTTTTCTCGCAAATGGAGTTCAACTCTGGAGAGGGGTTAGAGAAGAACTCATTTACCTAAATGGGGAATTGGAACACATGAGGGCCTTGCTGAAGAAGGCAGACGCAATGGAAGAAAGTGATGAAGAACTCAAAGTATGGGTTAAGCAGATACGAGATGTTGCTCATGATGCAGAAGATGTTATAGATGAATTCACACTCCTTCAAACAAATAACAATCATGGGCACCAACTATATTATTCTTTACACTTGCTTTCTTGCAGTGTTAAGAACCTGAAAGCTCATTATCGGGTTGCCACGGAGTTACAGAGCATCAACACCCGAATCAAAGAGATCTTTGCAGTGCATAAAAGACTTCTTCCTAAACTTAATGCCGCTGCAAACGGCTCCATTTTTACTAGTTCAGGTAGCAAATGGCATGATCGGCGAGAGGATGCTCTTCTTTTAGACAATACTGATGTTGTGGGCATAGACGAGCCTAAAAACCTACTGGTCAGCTGGCTGGTCAAGGGTGACTCTGGACGTGAAGTAGTTTCAGTGACAGGAATGGGTGGTATGGGCAAAACCACCTTGGTGAAGCAAGTCTATGATGATGTAGAAGTGAAGAAACGTTTCAAACCCCGTACCTGGATCACAGTTTCTCAGTCTTTTGAAGCACAGGATCTCCTTAAAGACATCATTCACCAACTCTATTCAGAAATTGGGAGGCCTGTTCCAGAAGGTGTAGATGGCATGAATAGCAATAAATTGAAAGCAAGAATCAAAGACTTGCTGCAAAAAAGGAGGTACCTGATTGTTCTTGATGATGTCTGGCACACCAACGAATGGGAGACTGTCAAATATGCTTTTCCTAATGGGAAGCTTGGCAGCAGAGTCATGATCACTACTCGTAAATCTGATGTAGCATCCACCTCTTGCTCAGAATCTGAAGGTCATGTCCATGAGGTGAAACCCTTGCCTGAAAAGGAGTCTTGGAGTCTGTTCAGTAGGAAGGCATTTCGGGGGAAGTCATGCCCTTCTTATTTGGAATCATTCTGTAAAGATATCCTAAAAAAGTGTGAGGGTTTGCCCTTTGCAATTGTGGCAATAAGTGGTGTTTTGGCAACAAAAGACAGGCGCAGAATAGATGAGTGGGATATTATTTGCCGTAGTCTTGGAGCTGAAATTCATGGCAATGATAAACTTGAGGATTTGAAGAAAGTCCTTTCTCTCAGTTTTAATGATTTGCCCTATAATCTGAAGGCATGTTTTTTGTGCTTGAGCGTCTTTCCGGAGGGTCATCTGATTAAGCGTATGAAAATCATTCGCTTATGGATAGCAGAAAGATTTGTTGAAGCTAGAGAAGGAAGAACATTGGAGGAAGTAGCTGAGGACTACCTCAAGGAGCTGTTGAACAGAAGTTTGATGCTAGTGGGAGACACAACAAGTGATGGAAGGGTCAAAACTTACCGCATCCATGACCTTTTGCGAGAGATTATTGTCTCAAAATCAAGGGATCAAAACTTTGCAGCCATAATGAAGGAGCACAACACAATCTGGCCTGATAGAGTTCGACGCTTGTCAATACATAATGTATTGCAAACTGTACAACAAAGCAGGTCATTTCCTCAACTTCGTTCCTTGTTTGTGTTTGGGGCGGTTTCAAGGTCATCCATGCATAAAAATCTTTCCAATGGCTTTAGGTTGCTTAGGGTGTTAGATATAGAAGCTGCACCTATAAAGACATTTCCAAGAGAAATCATGGACCTGTTTTATTTAAGTTATCTAAGCTTGAGGAAGACTCAGGTGAAGGTCATTCCCAGAAGCATAGGGAATCTGCAGAACCTGGAGACATTGGATCTTAAAAAGACTTATGTCTCTGAGTTGCCTGTTGAGATACTAAAGCTCCAAAAACTCCGCCACCTCCTGGTTTATCATCTTAAGATTGAATCTTATGCACACTTCTATTCCAAGTTTGGCTTTAAGGTCCTCTCAAGTTTAGGAGATCTGCAGTCCCTGCAAAAGCTCTGTTTTATTGAGGCAAATCAAGGTTGTGGAATGACAATCAGGGAGTTAGCTAAACTCAAGCAACTTAGGAGGTTGGGAATTATAAAATTGAGAAAAGAAGATGGATTGGCTTTGTGCTTATCCCTCGAAAGTTTGACCAAGCTGCGTTCATTTTCTGTAAATTCTGCAGGAGAGAATGAGATTATTGATCTCCAACACCTGTCTTCCCCTCCTCAGTTTCTTGAACGACTATACCTGACAGGACGTTTGGAAGAGTTACCAAGTTGGATACCTTCACTACATAGCTTGGTTAAGTTATTTTTGAAGTGGAGTCAATTAAAGGATGACCCATTGGTACTTCTTCAAGATTTGCCCAATCTTGTTCATCTTGAATTGCTTCATACTTGTGATAATGACATGTTGTCATTCAATGGTGGGGGATTTAAAAAGCTTAAGGTTTTGGGTCTTGACAAATTTGACAAGCTCAGTTGTGTGAAGGTAGAGAAGGGAGCAATGCCATGCCTTGAAAGGCTGACAATCCAACGATGCAAGTTGTTGAAGAGGGTACCATCAGGAGTTGAAAACCTTACCAAACTGAAATCACTTCAGTTCTATGACATGCCGTATGAATTAATCTCAAAATTGCGGCCAGACGGAGAAGGTGAGGATTATGGAGAAGTTGCACATATCCCTGAAGTTTATTCTGCCTACTGGAGAGATGGTGGTTGGGATGTCTATCCAATAGAGAGTTTCAAGGAGATAGAAAATAGTCCCTCACCAGCTGGTACTGTTAGGAGAAGCCATGAACTTCGTCCTCTGTGGAAGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0042742 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

952

Amino Acids

109.08

Weight (kDa)

8.97

Isoelectric Point (pI)

48.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 86	3.2e-25	Rx N-terminal domain
NB-ARC	PF00931	174 - 351	6.2e-45	NB-ARC domain
WHD_DRP	PF23559	436 - 507	1.5e-21	Disease resistance protein Winged helix domain
LRR_14	PF23598	551 - 880	5.8e-48	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42120
fragaria_vesca	FvH4_4g18100 FvH4_4g18150 FvH4_4g18200 FvH4_5g32800 FvH4_5g32800
malus_domestica	MD08G1201700.v1.1 MD10G1019400.v1.1 MD10G1019500.v1.1 MD10G1019800.v1.1 MD10G1019900.v1.1 MD10G1020300.v1.1
prunus_persica	Prupe.8G022700_v2.0.a1
pyrus_communis	pycom10g01260
rosa_chinensis	RchiOBHm_Chr7g0230531
rosa_laevigata	RLG00000001488 RLG00000002646
rosa_multiflora	Rmu_co8495365.1_g000001 Rmu_sc0002799.1_g000003 Rmu_sc0005117.1_g000004
rosa_roxburghii	Rroxscaffold_3G00230050
rosa_rugosa	Rorug07G0261300
rosa_samantha	Rh7AG410200 Rh7AG412400 Rh7AG412500 Rh7BG389900 Rh7CG430100 Rh7CG430200 Rh7DG408000
rosa_wichuraiana	Rw7G034110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2132
Acc36I	ACCTGC	1 cut(s)	1629
Acc65I	GGTACC	2 cut(s)	828, 2593
AccB1I	GGYRCC	3 cut(s)	267, 828, 2593
AccB7I	CCANNNNNTGG	2 cut(s)	867, 1948
AccIII	TCCGGA	1 cut(s)	1312
AciI	CCGC	5 cut(s)	417, 1492, 1679, 1939, 2674
AclI	AACGTT	1 cut(s)	652
AclWI	GGATC	4 cut(s)	680, 711, 1545, 1887
AcoI	YGGCCR	1 cut(s)	2675
AcsI	RAATTY	4 cut(s)	233, 1206, 2209, 2501
AcuI	CTGAAG	5 cut(s)	155, 990, 1301, 2618, 2742
AfaI	GTAC	6 cut(s)	667, 830, 1629, 2385, 2595, 2815
AfiI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
AflII	CTTAAG	2 cut(s)	1961, 2480
AflIII	ACRYGT	1 cut(s)	2445
AhdI	GACNNNNNGTC	1 cut(s)	2449
AhlI	ACTAGT	1 cut(s)	440
AjiI	CACGTC	1 cut(s)	566
AjnI	CCWGG	3 cut(s)	668, 1866, 1947
AleI	CACNNNNGTG	1 cut(s)	614
Alw21I	GWGCWC	1 cut(s)	1569
Alw26I	GTCTC	5 cut(s)	866, 1452, 1528, 1865, 1903
AlwI	GGATC	4 cut(s)	680, 711, 1545, 1887
AlwNI	CAGNNNCTG	3 cut(s)	968, 1867, 2038
Aor13HI	TCCGGA	1 cut(s)	1312
AoxI	GGCC	4 cut(s)	126, 749, 1580, 2675
ApeKI	GCWGC	6 cut(s)	419, 814, 909, 1550, 1751, 2191
ApoI	RAATTY	4 cut(s)	233, 1206, 2209, 2501
ArsI	GACNNNNNNTTYG	2 cut(s)	2278, 2310
AseI	ATTAAT	1 cut(s)	2660
Asp700I	GAANNNNTTC	2 cut(s)	653, 2424
Asp718I	GGTACC	2 cut(s)	828, 2593
AspLEI	GCGC	1 cut(s)	1161
AspS9I	GGNCC	3 cut(s)	126, 1786, 2008
AsuHPI	GGTGA	7 cut(s)	566, 628, 716, 1000, 1840, 2702, 2796
AvaII	GGWCC	2 cut(s)	1786, 2008
BaeGI	GKGCMC	1 cut(s)	270
BanI	GGYRCC	3 cut(s)	267, 828, 2593
BbsI	GAAGAC	2 cut(s)	1826, 2244
Bbv12I	GWGCWC	1 cut(s)	1569
BbvCI	CCTCAGC	1 cut(s)	1410
BbvI	GCAGC	6 cut(s)	406, 801, 921, 1562, 1738, 2178
BccI	CCATC	5 cut(s)	764, 1466, 2144, 2605, 2741
BceAI	ACGGC	3 cut(s)	442, 1173, 2635
BciT130I	CCWGG	3 cut(s)	670, 1868, 1949
BciVI	GTATCC	1 cut(s)	2310
BclI	TGATCA	1 cut(s)	921
BcoDI	GTCTC	5 cut(s)	866, 1452, 1528, 1865, 1903
BcuI	ACTAGT	1 cut(s)	440
BfaI	CTAG	3 cut(s)	441, 1380, 1451
BfmI	CTRYAG	3 cut(s)	1859, 2030, 2214
BfrI	CTTAAG	2 cut(s)	1961, 2480
BfuAI	ACCTGC	1 cut(s)	1629
BfuI	GTATCC	1 cut(s)	2310
BglII	AGATCT	3 cut(s)	36, 375, 2026
BisI	GCNGC	8 cut(s)	417, 420, 815, 910, 1551, 1752, 2192, 2675
BlsI	GCNGC	8 cut(s)	418, 421, 816, 911, 1552, 1753, 2193, 2676
Bme1390I	CCNGG	3 cut(s)	670, 1868, 1949
Bme18I	GGWCC	2 cut(s)	1786, 2008
BmeRI	GACNNNNNGTC	1 cut(s)	2449
BmgBI	CACGTC	1 cut(s)	566
BmgT120I	GGNCC	3 cut(s)	126, 1786, 2008
BmiI	GGNNCC	4 cut(s)	269, 430, 830, 2595
BmrFI	CCNGG	3 cut(s)	670, 1868, 1949
BmsI	GCATC	7 cut(s)	202, 363, 466, 956, 1437, 1503, 2564
BoxI	GACNNNNGTC	2 cut(s)	1600, 1895
BpiI	GAAGAC	2 cut(s)	1826, 2244
BplI	GAGNNNNNCTC	6 cut(s)	51, 83, 75, 107, 1807, 1839
BpmI	CTGGAG	3 cut(s)	91, 1889, 2761
Bpu10I	CCTNAGC	2 cut(s)	1410, 1730
BpuEI	CTTGAG	6 cut(s)	1247, 1321, 1406, 1834, 1999, 2090
BsaBI	GATNNNNATC	1 cut(s)	2763
BsaJI	CCNNGG	2 cut(s)	339, 612
BsaWI	WCCGGW	1 cut(s)	1312
BsaXI	ACNNNNNCTCC	6 cut(s)	690, 720, 1911, 1941, 2734, 2764
Bsc4I	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
Bse1I	ACTGG	2 cut(s)	537, 2744
Bse3DI	GCAATG	3 cut(s)	156, 1222, 2547
Bse8I	GATNNNNATC	1 cut(s)	2763
BseAI	TCCGGA	1 cut(s)	1312
BseBI	CCWGG	3 cut(s)	670, 1868, 1949
BseDI	CCNNGG	2 cut(s)	339, 612
BseGI	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BseJI	GATNNNNATC	1 cut(s)	2763
BseLI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
BseMI	GCAATG	3 cut(s)	156, 1222, 2547
BseMII	CTCAG	8 cut(s)	698, 975, 1267, 1401, 1838, 1893, 2276, 2527
BseNI	ACTGG	2 cut(s)	537, 2744
BseRI	GAGGAG	1 cut(s)	2250
BseSI	GKGCMC	1 cut(s)	270
BseXI	GCAGC	6 cut(s)	406, 801, 921, 1562, 1738, 2178
BsgI	GTGCAG	2 cut(s)	33, 1737
BshFI	GGCC	4 cut(s)	128, 751, 1582, 2677
BshNI	GGYRCC	3 cut(s)	267, 828, 2593
BsiHKAI	GWGCWC	1 cut(s)	1569
BsiSI	CCGG	1 cut(s)	1313
BslFI	GGGAC	2 cut(s)	2020, 2784
BslI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
BsmAI	GTCTC	5 cut(s)	866, 1452, 1528, 1865, 1903
BsmFI	GGGAC	2 cut(s)	2020, 2784
BsnI	GGCC	4 cut(s)	128, 751, 1582, 2677
Bsp1286I	GDGCHC	2 cut(s)	270, 1569
Bsp13I	TCCGGA	1 cut(s)	1312
Bsp1407I	TGTACA	1 cut(s)	1627
BspACI	CCGC	5 cut(s)	417, 1492, 1679, 1939, 2674
BspANI	GGCC	4 cut(s)	128, 751, 1582, 2677
BspCNI	CTCAG	8 cut(s)	697, 974, 1266, 1402, 1837, 1894, 2275, 2526
BspEI	TCCGGA	1 cut(s)	1312
BspHI	TCATGA	2 cut(s)	208, 918
BspLI	GGNNCC	4 cut(s)	269, 430, 830, 2595
BspMAI	CTGCAG	3 cut(s)	1863, 2034, 2218
BspMI	ACCTGC	1 cut(s)	1629
BspPI	GGATC	4 cut(s)	680, 711, 1545, 1887
BspQI	GCTCTTC	1 cut(s)	486
BspT107I	GGYRCC	3 cut(s)	267, 828, 2593
BspTI	CTTAAG	2 cut(s)	1961, 2480
BsrDI	GCAATG	3 cut(s)	156, 1222, 2547
BsrGI	TGTACA	1 cut(s)	1627
BsrI	ACTGG	2 cut(s)	537, 2744
BssECI	CCNNGG	2 cut(s)	339, 612
BssT1I	CCWWGG	1 cut(s)	612
Bst2UI	CCWGG	3 cut(s)	670, 1868, 1949
Bst4CI	ACNGT	4 cut(s)	679, 877, 1627, 2818
Bst6I	CTCTTC	3 cut(s)	486, 2295, 2582
BstAFI	CTTAAG	2 cut(s)	1961, 2480
BstAPI	GCANNNNNTGC	1 cut(s)	2038
BstAUI	TGTACA	1 cut(s)	1627
BstC8I	GCNNGC	1 cut(s)	542
BstDSI	CCRYGG	1 cut(s)	339
BstF5I	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BstHHI	GCGC	1 cut(s)	1161
BstMAI	GTCTC	5 cut(s)	866, 1452, 1528, 1865, 1903
BstMWI	GCNNNNNNNGC	5 cut(s)	212, 466, 780, 1124, 2038
BstNI	CCWGG	3 cut(s)	670, 1868, 1949
BstNSI	RCATGY	3 cut(s)	1290, 2449, 2650
BstPAI	GACNNNNGTC	2 cut(s)	1600, 1895
BstSCI	CCNGG	3 cut(s)	668, 1866, 1947
BstSFI	CTRYAG	3 cut(s)	1859, 2030, 2214
BstSLI	GKGCMC	1 cut(s)	270
BstV1I	GCAGC	6 cut(s)	406, 801, 921, 1562, 1738, 2178
BstV2I	GAAGAC	2 cut(s)	1826, 2244
BstX2I	RGATCY	5 cut(s)	36, 375, 703, 1879, 2026
BstYI	RGATCY	5 cut(s)	36, 375, 703, 1879, 2026
BsuI	GTATCC	1 cut(s)	2310
BsuRI	GGCC	4 cut(s)	128, 751, 1582, 2677
BtgI	CCRYGG	1 cut(s)	339
BtrI	CACGTC	1 cut(s)	566
BtsCI	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BtsI	GCAGTG	2 cut(s)	310, 390
BtsIMutI	CAGTG	3 cut(s)	310, 390, 585
BveI	ACCTGC	1 cut(s)	1629
Cac8I	GCNNGC	1 cut(s)	542
CaiI	CAGNNNCTG	3 cut(s)	968, 1867, 2038
CciI	TCATGA	2 cut(s)	208, 918
CfoI	GCGC	1 cut(s)	1161
Cfr13I	GGNCC	3 cut(s)	126, 1786, 2008
CseI	GACGC	3 cut(s)	155, 1294, 1605
Csp6I	GTAC	6 cut(s)	666, 829, 1628, 2384, 2594, 2814
CviQI	GTAC	6 cut(s)	666, 829, 1628, 2384, 2594, 2814
DraI	TTTAAA	1 cut(s)	2473
DriI	GACNNNNNGTC	1 cut(s)	2449
EaeI	YGGCCR	1 cut(s)	2675
Eam1104I	CTCTTC	3 cut(s)	486, 2295, 2582
Eam1105I	GACNNNNNGTC	1 cut(s)	2449
EarI	CTCTTC	3 cut(s)	486, 2295, 2582
EciI	GGCGGA	1 cut(s)	1928
Eco130I	CCWWGG	1 cut(s)	612
Eco147I	AGGCCT	1 cut(s)	751
Eco32I	GATATC	1 cut(s)	1087
Eco47I	GGWCC	2 cut(s)	1786, 2008
Eco57I	CTGAAG	5 cut(s)	155, 990, 1301, 2618, 2742
EcoO109I	RGGNCCY	2 cut(s)	126, 2008
EcoRI	GAATTC	1 cut(s)	233
EcoRII	CCWGG	3 cut(s)	668, 1866, 1947
EcoRV	GATATC	1 cut(s)	1087
EcoT14I	CCWWGG	1 cut(s)	612
EcoT22I	ATGCAT	1 cut(s)	1701
ErhI	CCWWGG	1 cut(s)	612
FalI	AAGNNNNNCTT	2 cut(s)	1985, 2017
FaqI	GGGAC	2 cut(s)	2020, 2784
FbaI	TGATCA	1 cut(s)	921
Fnu4HI	GCNGC	8 cut(s)	417, 420, 815, 910, 1551, 1752, 2192, 2675
FokI	GGATG	6 cut(s)	488, 934, 1481, 1678, 2384, 2771
Fsp4HI	GCNGC	8 cut(s)	417, 420, 815, 910, 1551, 1752, 2192, 2675
FspBI	CTAG	3 cut(s)	441, 1380, 1451
GlaI	GCGC	1 cut(s)	1160
GluI	GCNGC	8 cut(s)	417, 420, 815, 910, 1551, 1752, 2192, 2675
GsuI	CTGGAG	3 cut(s)	91, 1889, 2761
HaeIII	GGCC	4 cut(s)	128, 751, 1582, 2677
HapII	CCGG	1 cut(s)	1313
HgaI	GACGC	3 cut(s)	155, 1294, 1605
HhaI	GCGC	1 cut(s)	1161
Hin6I	GCGC	1 cut(s)	1159
HinP1I	GCGC	1 cut(s)	1159
HindIII	AAGCTT	3 cut(s)	902, 1810, 2477
HpaII	CCGG	1 cut(s)	1313
HphI	GGTGA	7 cut(s)	566, 628, 716, 1000, 1840, 2702, 2796
Hpy188I	TCNGA	8 cut(s)	7, 739, 940, 964, 970, 1281, 1326, 1903
Hpy99I	CGWCG	1 cut(s)	1599
HpyCH4III	ACNGT	4 cut(s)	679, 877, 1627, 2818
HpyCH4IV	ACGT	3 cut(s)	565, 652, 2293
HpyF10VI	GCNNNNNNNGC	5 cut(s)	212, 466, 780, 1124, 2038
HpySE526I	ACGT	3 cut(s)	565, 652, 2293
HspAI	GCGC	1 cut(s)	1159
Kpn2I	TCCGGA	1 cut(s)	1312
KpnI	GGTACC	2 cut(s)	832, 2597
Ksp22I	TGATCA	1 cut(s)	921
LguI	GCTCTTC	1 cut(s)	486
LmnI	GCTCC	6 cut(s)	434, 1199, 1426, 1564, 1932, 2537
Lsp1109I	GCAGC	6 cut(s)	406, 801, 921, 1562, 1738, 2178
LweI	GCATC	7 cut(s)	202, 363, 466, 956, 1437, 1503, 2564
MaeI	CTAG	3 cut(s)	441, 1380, 1451
MaeII	ACGT	3 cut(s)	565, 652, 2293
MaeIII	GTNAC	4 cut(s)	345, 554, 580, 2304
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	5 cut(s)	36, 375, 703, 1879, 2026
MhlI	GDGCHC	2 cut(s)	270, 1569
MlyI	GAGTC	6 cut(s)	551, 924, 1019, 1027, 1816, 2368
MmeI	TCCRAC	3 cut(s)	2266, 2294, 2593
Mph1103I	ATGCAT	1 cut(s)	1701
MroI	TCCGGA	1 cut(s)	1312
MroXI	GAANNNNTTC	2 cut(s)	653, 2424
MslI	CAYNNNNRTG	4 cut(s)	614, 981, 1215, 2433
MspA1I	CMGCKG	3 cut(s)	419, 540, 2810
MspCI	CTTAAG	2 cut(s)	1961, 2480
MspI	CCGG	1 cut(s)	1313
MspR9I	CCNGG	3 cut(s)	670, 1868, 1949
MunI	CAATTG	1 cut(s)	1119
MvaI	CCWGG	3 cut(s)	670, 1868, 1949
MwoI	GCNNNNNNNGC	5 cut(s)	212, 466, 780, 1124, 2038
NlaIV	GGNNCC	4 cut(s)	269, 430, 830, 2595
NmuCI	GTSAC	2 cut(s)	554, 580
NsiI	ATGCAT	1 cut(s)	1701
NspI	RCATGY	3 cut(s)	1290, 2449, 2650
OliI	CACNNNNGTG	1 cut(s)	614
PagI	TCATGA	2 cut(s)	208, 918
PceI	AGGCCT	1 cut(s)	751
PciI	ACATGT	1 cut(s)	2445
PciSI	GCTCTTC	1 cut(s)	486
PdmI	GAANNNNTTC	2 cut(s)	653, 2424
PfeI	GAWTC	6 cut(s)	366, 801, 965, 1070, 1855, 1970
PflMI	CCANNNNNTGG	2 cut(s)	867, 1948
PkrI	GCNGC	8 cut(s)	418, 421, 816, 911, 1552, 1753, 2193, 2676
PleI	GAGTC	6 cut(s)	551, 923, 1018, 1026, 1816, 2367
PpsI	GAGTC	6 cut(s)	551, 923, 1018, 1026, 1816, 2367
PpuMI	RGGWCCY	1 cut(s)	2008
PscI	ACATGT	1 cut(s)	2445
PshAI	GACNNNNGTC	2 cut(s)	1600, 1895
PshBI	ATTAAT	1 cut(s)	2660
PsiI	TTATAA	1 cut(s)	2132
Psp1406I	AACGTT	1 cut(s)	652
Psp5II	RGGWCCY	1 cut(s)	2008
Psp6I	CCWGG	3 cut(s)	668, 1866, 1947
PspGI	CCWGG	3 cut(s)	668, 1866, 1947
PspN4I	GGNNCC	4 cut(s)	269, 430, 830, 2595
PspPI	GGNCC	3 cut(s)	126, 1786, 2008
PspPPI	RGGWCCY	1 cut(s)	2008
PstI	CTGCAG	3 cut(s)	1863, 2034, 2218
PstNI	CAGNNNCTG	3 cut(s)	968, 1867, 2038
PsuI	RGATCY	5 cut(s)	36, 375, 703, 1879, 2026
PvuII	CAGCTG	2 cut(s)	540, 2810
RsaI	GTAC	6 cut(s)	667, 830, 1629, 2385, 2595, 2815
RsaNI	GTAC	6 cut(s)	666, 829, 1628, 2384, 2594, 2814
RseI	CAYNNNNRTG	4 cut(s)	614, 981, 1215, 2433
SapI	GCTCTTC	1 cut(s)	486
SatI	GCNGC	8 cut(s)	417, 420, 815, 910, 1551, 1752, 2192, 2675
Sau96I	GGNCC	3 cut(s)	126, 1786, 2008
SchI	GAGTC	6 cut(s)	551, 924, 1019, 1027, 1816, 2368
ScrFI	CCNGG	3 cut(s)	670, 1868, 1949
SduI	GDGCHC	2 cut(s)	270, 1569
SfaNI	GCATC	7 cut(s)	202, 363, 466, 956, 1437, 1503, 2564
SfcI	CTRYAG	3 cut(s)	1859, 2030, 2214
SinI	GGWCC	2 cut(s)	1786, 2008
SmiMI	CAYNNNNRTG	4 cut(s)	614, 981, 1215, 2433
SmlI	CTYRAG	8 cut(s)	1226, 1300, 1421, 1813, 1961, 2014, 2105, 2480
SmoI	CTYRAG	8 cut(s)	1226, 1300, 1421, 1813, 1961, 2014, 2105, 2480
SpeI	ACTAGT	1 cut(s)	440
SseBI	AGGCCT	1 cut(s)	751
SsiI	CCGC	5 cut(s)	417, 1492, 1679, 1939, 2674
SspMI	CTAG	3 cut(s)	441, 1380, 1451
StuI	AGGCCT	1 cut(s)	751
StyD4I	CCNGG	3 cut(s)	668, 1866, 1947
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	4 cut(s)	679, 877, 1627, 2818
TaiI	ACGT	3 cut(s)	568, 655, 2296
TaqI	TCGA	2 cut(s)	1594, 2175
TatI	WGTACW	1 cut(s)	1627
TauI	GCSGC	2 cut(s)	419, 2677
TfiI	GAWTC	6 cut(s)	366, 801, 965, 1070, 1855, 1970
TscAI	CASTG	3 cut(s)	310, 390, 585
TseFI	GTSAC	2 cut(s)	554, 580
TseI	GCWGC	6 cut(s)	419, 814, 909, 1550, 1751, 2191
Tsp45I	GTSAC	2 cut(s)	554, 580
TspGWI	ACGGA	2 cut(s)	356, 2697
TspRI	CASTG	3 cut(s)	310, 390, 585
Van91I	CCANNNNNTGG	2 cut(s)	867, 1948
Vha464I	CTTAAG	2 cut(s)	1961, 2480
VpaK11BI	GGWCC	2 cut(s)	1786, 2008
VspI	ATTAAT	1 cut(s)	2660
XapI	RAATTY	4 cut(s)	233, 1206, 2209, 2501
XceI	RCATGY	3 cut(s)	1290, 2449, 2650
XmnI	GAANNNNTTC	2 cut(s)	653, 2424
XspI	CTAG	3 cut(s)	441, 1380, 1451
Zsp2I	ATGCAT	1 cut(s)	1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.