Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004393

Physical Location & Seq

Genomic Coordinates Reverse (-)

24816995 .. 24821888

Gene Structure 4894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0263800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGTCGACTTTCTCGGCCGCACCCAATAATATTCATACCTGTGTCCGCAACCACCACAATTCGTTATTCTTTTTCCCCACTTGTGTGACGTCTTCAGTTTCCAAATATCAGGGAAGCCATAAAACAACCTCAACTGTTACTTTCAATGGCCTCAGATCAAAACATAACAGGACTAGTTTCCAAAACACTGCAGTTTTCGGAGGACTCAATCCCTCCAGGTTCTTGCAAATGGGTTCTGAAGAAGCTTGCTCCAGCAGACAGAGTCTGATCAAATCAACTGGCTCAGAGAGTGCCAGCACTTCCACTCTGTCTCAAAATGTGGTTGGGGTTTTGCATCTGGTTGTTTCACTTGGGATCATTCTTGCAATAGACAAATTCTTGAAGCAGGCATTTGTGGCAGCTGCGATTAAGTTCCCGAGTGCGCTTTTCGGGATGTTTTGTATATTCTCAATTCTGACCGGTCTTGATGCCACTGTTCCTGCTGTGGCAACAAGCTTGATGAGTTTCTTTCAGCCGGCGCTGTTGTTCATTCAGAGATGGCTGCCATTGTTTTATGTGCCATCTTTGGTTGTTTTGCCTCTTTCTGTTAAGAGTATTCCCCCGGCTTCTGGCATCAAGATTTGCTATATTATAGCTGGAGGCTGGCTGGCTTCACTAGCTGTTGCAGGATATACAGCAATAGCAGTCAGAAAACTGGTAAAGACAGAAATGACAGATGCTGAGCCTATGGCAAAACCCTCTCCATTTTCTTCCATTGAAGCATGGTCTTGGAGTGGGATCCTCCTCATCTCATTTGTTGGAGCATTAGTAAACCCAACAGCACTGGGGACAAGTGCTCTGACATGCCTTCCATTCCTACTTGCATCCACTGTGTTAGGTTACATTGTTGGTTCTGGATTGCCATCAGATGTGAAGAAGATTTTCCACCCAATTATTTGTTGTGCCCTATCTGCAGATGTGGCAGCAGTGGCTTATGGATACTTTTCCAAGTCTGGGCTTGATCCTGTCCTTGAATCTTACCTTACAAAGGTTTCATCAAACCCTGGAGCTGGTGATATTCTGATGGGATTCTTGGGGTCTGTTATCCTCTCATTTGCTTTCTCAATGTTCCAACAGAGGAAGCTGGTCAAGAGGCATGCAGCAGAGATTTTCACATCTGTAATCATATCGTGCATATTCTCATTGTATTCAACCGCTCTTATTGGACGTCTCGTTGGGTTAGAATCAAGTTTGACTGTCTCAATTCTACCACGATGTATAACCGTGGCATTAGCCCTCAGCATTGTGTCCTTGTTCGAAGGTGCCAATTCATCTCTCACAGCTGCCGTTGTTGTAGTAACTGGTTTGGTGGGAGCTAATTTTGTACAGGCAACACTTGATAAACTACAGTTCCGAGATCCTATTGCTCGGGGAATAGCTACTGCATCTAGTGCTCATGGATTGGGAACAGCAGCATTGTCAGCCAAGGAACCCGAGGCTCTCCCATTTTGTGCCATTGCTTATGCTTTGAATGGTATATTTGGTTCTTTGCTCTGCTCAATTCCAGCAGTCAGGCAAAGCTTGCTTGCCGTGATTGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0017038 GO:0019395 GO:0019752 GO:0030258 GO:0031090 GO:0031903 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0065002 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

No domains found.

Protein Analysis

527

Amino Acids

55.41

Weight (kDa)

9.24

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LrgB	PF04172	290 - 513	2.7e-38	LrgB-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07560
fragaria_vesca	FvH4_5g32960 FvH4_5g32960 FvH4_5g32960
malus_domestica	MD00G1127600.v1.1 MD04G1046700.v1.1
prunus_persica	Prupe.1G200400_v2.0.a1
pyrus_communis	pycom04g04050
rosa_chinensis	RchiOBHm_Chr1g0340971 RchiOBHm_Chr7g0230961
rosa_laevigata	RLG00000001437 RLG00000029056
rosa_multiflora	Rmu_sc0000483.1_g000038 Rmu_sc0001211.1_g000082 Rmu_sc0002200.1_g000045
rosa_roxburghii	Rroxscaffold_3G00229620 Rroxscaffold_4G00311630
rosa_rugosa	Rorug01G0160400.1 Rorug07G0263700 Rorug07G0263800
rosa_samantha	Rh1AG175000 Rh1BG143400 Rh1CG163000 Rh1DG175000 Rh7AG417100 Rh7BG393000 Rh7BG393300 Rh7CG436500 Rh7DG411300 Rh7DG411400
rosa_wichuraiana	Rw1G014710 Rw7G034530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	92, 1210
AccB1I	GGYRCC	1 cut(s)	1301
AccBSI	CCGCTC	1 cut(s)	1196
AccI	GTMKAC	1 cut(s)	5
AciI	CCGC	3 cut(s)	18, 46, 1194
AclWI	GGATC	5 cut(s)	362, 772, 785, 995, 1391
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	1 cut(s)	374
AcuI	CTGAAG	2 cut(s)	78, 258
AcyI	GRCGYC	2 cut(s)	89, 1207
AfaI	GTAC	1 cut(s)	1365
AfiI	CCNNNNNNNGG	4 cut(s)	608, 993, 1027, 1049
AgeI	ACCGGT	1 cut(s)	458
AgsI	TTSAA	6 cut(s)	145, 382, 758, 1013, 1191, 1510
AhlI	ACTAGT	1 cut(s)	173
AjnI	CCWGG	2 cut(s)	215, 1042
AleI	CACNNNNGTG	1 cut(s)	83
Alw21I	GWGCWC	2 cut(s)	838, 1435
Alw26I	GTCTC	3 cut(s)	315, 1214, 1243
AlwI	GGATC	5 cut(s)	362, 772, 785, 995, 1391
AlwNI	CAGNNNCTG	2 cut(s)	265, 719
Ama87I	CYCGRG	3 cut(s)	415, 1407, 1472
AoxI	GGCC	2 cut(s)	15, 148
ApeKI	GCWGC	7 cut(s)	398, 401, 541, 962, 1139, 1322, 1451
ApoI	RAATTY	1 cut(s)	374
AsiGI	ACCGGT	1 cut(s)	458
Asp700I	GAANNNNTTC	1 cut(s)	920
AspLEI	GCGC	2 cut(s)	424, 520
AsuC2I	CCSGG	1 cut(s)	602
AsuHPI	GGTGA	1 cut(s)	1064
AsuII	TTCGAA	1 cut(s)	1296
AvaI	CYCGRG	3 cut(s)	415, 1407, 1472
BaeGI	GKGCMC	1 cut(s)	946
BamHI	GGATCC	1 cut(s)	777
BanI	GGYRCC	1 cut(s)	1301
BbsI	GAAGAC	1 cut(s)	84
Bbv12I	GWGCWC	2 cut(s)	838, 1435
BbvCI	CCTCAGC	1 cut(s)	1277
BbvI	GCAGC	7 cut(s)	388, 410, 528, 974, 1151, 1309, 1463
BccI	CCATC	4 cut(s)	531, 568, 910, 1057
BceAI	ACGGC	2 cut(s)	1310, 1553
BciT130I	CCWGG	2 cut(s)	217, 1044
BciVI	GTATCC	1 cut(s)	971
BclI	TGATCA	1 cut(s)	267
BcnI	CCSGG	1 cut(s)	602
BcoDI	GTCTC	3 cut(s)	315, 1214, 1243
BcuI	ACTAGT	1 cut(s)	173
BfaI	CTAG	3 cut(s)	174, 656, 1428
BfmI	CTRYAG	3 cut(s)	189, 951, 1385
BfoI	RGCGCY	1 cut(s)	521
BfuI	GTATCC	1 cut(s)	971
BisI	GCNGC	8 cut(s)	18, 399, 402, 542, 963, 1140, 1323, 1452
BlpI	GCTNAGC	1 cut(s)	720
BlsI	GCNGC	8 cut(s)	19, 400, 403, 543, 964, 1141, 1324, 1453
Bme1390I	CCNGG	3 cut(s)	217, 602, 1044
BmeT110I	CYCGRG	3 cut(s)	415, 1407, 1472
BmiI	GGNNCC	3 cut(s)	779, 1303, 1470
BmrFI	CCNGG	3 cut(s)	217, 602, 1044
BmrI	ACTGGG	1 cut(s)	833
BmsI	GCATC	6 cut(s)	343, 457, 621, 706, 872, 1433
BmuI	ACTGGG	1 cut(s)	833
BpiI	GAAGAC	1 cut(s)	84
BpmI	CTGGAG	4 cut(s)	199, 235, 657, 1065
Bpu10I	CCTNAGC	1 cut(s)	1277
Bpu1102I	GCTNAGC	1 cut(s)	720
Bpu14I	TTCGAA	1 cut(s)	1296
BpuMI	CCSGG	1 cut(s)	602
BsaBI	GATNNNNATC	1 cut(s)	901
BsaHI	GRCGYC	2 cut(s)	89, 1207
BsaJI	CCNNGG	5 cut(s)	600, 1042, 1263, 1464, 1473
BsaWI	WCCGGW	1 cut(s)	458
BsaXI	ACNNNNNCTCC	2 cut(s)	792, 822
Bsc4I	CCNNNNNNNGG	4 cut(s)	608, 993, 1027, 1049
Bse118I	RCCGGY	2 cut(s)	458, 514
Bse1I	ACTGG	4 cut(s)	283, 699, 828, 1345
Bse3DI	GCAATG	1 cut(s)	1494
Bse8I	GATNNNNATC	1 cut(s)	901
BseBI	CCWGG	2 cut(s)	217, 1044
BseDI	CCNNGG	5 cut(s)	600, 1042, 1263, 1464, 1473
BseGI	GGATG	2 cut(s)	438, 863
BseJI	GATNNNNATC	1 cut(s)	901
BseLI	CCNNNNNNNGG	4 cut(s)	608, 993, 1027, 1049
BseMI	GCAATG	1 cut(s)	1494
BseMII	CTCAG	4 cut(s)	166, 297, 711, 1291
BseNI	ACTGG	4 cut(s)	283, 699, 828, 1345
BseRI	GAGGAG	1 cut(s)	773
BseSI	GKGCMC	1 cut(s)	946
BseX3I	CGGCCG	1 cut(s)	15
BseXI	GCAGC	7 cut(s)	388, 410, 528, 974, 1151, 1309, 1463
Bsh1285I	CGRYCG	1 cut(s)	18
BshFI	GGCC	2 cut(s)	17, 150
BshNI	GGYRCC	1 cut(s)	1301
BshTI	ACCGGT	1 cut(s)	458
BsiEI	CGRYCG	1 cut(s)	18
BsiHKAI	GWGCWC	2 cut(s)	838, 1435
BsiHKCI	CYCGRG	3 cut(s)	415, 1407, 1472
BsiSI	CCGG	3 cut(s)	459, 515, 602
BslFI	GGGAC	1 cut(s)	841
BslI	CCNNNNNNNGG	4 cut(s)	608, 993, 1027, 1049
BsmAI	GTCTC	3 cut(s)	315, 1214, 1243
BsmBI	CGTCTC	1 cut(s)	1214
BsmFI	GGGAC	1 cut(s)	841
BsnI	GGCC	2 cut(s)	17, 150
BsoBI	CYCGRG	3 cut(s)	415, 1407, 1472
Bsp119I	TTCGAA	1 cut(s)	1296
Bsp1286I	GDGCHC	3 cut(s)	838, 946, 1435
Bsp1407I	TGTACA	1 cut(s)	1363
Bsp143I	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
Bsp1720I	GCTNAGC	1 cut(s)	720
BspACI	CCGC	3 cut(s)	18, 46, 1194
BspANI	GGCC	2 cut(s)	17, 150
BspCNI	CTCAG	4 cut(s)	165, 296, 712, 1290
BspHI	TCATGA	1 cut(s)	1580
BspLI	GGNNCC	3 cut(s)	779, 1303, 1470
BspMAI	CTGCAG	2 cut(s)	193, 955
BspPI	GGATC	5 cut(s)	362, 772, 785, 995, 1391
BspT104I	TTCGAA	1 cut(s)	1296
BspT107I	GGYRCC	1 cut(s)	1301
BsrBI	CCGCTC	1 cut(s)	1196
BsrDI	GCAATG	1 cut(s)	1494
BsrFI	RCCGGY	2 cut(s)	458, 514
BsrGI	TGTACA	1 cut(s)	1363
BsrI	ACTGG	4 cut(s)	283, 699, 828, 1345
BssAI	RCCGGY	2 cut(s)	458, 514
BssECI	CCNNGG	5 cut(s)	600, 1042, 1263, 1464, 1473
BssMI	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
BssNI	GRCGYC	2 cut(s)	89, 1207
BssT1I	CCWWGG	1 cut(s)	1464
Bst2UI	CCWGG	2 cut(s)	217, 1044
Bst4CI	ACNGT	6 cut(s)	136, 475, 871, 1237, 1264, 1389
BstACI	GRCGYC	2 cut(s)	89, 1207
BstAPI	GCANNNNNTGC	2 cut(s)	1430, 1561
BstAUI	TGTACA	1 cut(s)	1363
BstBI	TTCGAA	1 cut(s)	1296
BstC8I	GCNNGC	9 cut(s)	247, 295, 387, 516, 644, 648, 1137, 1562, 1566
BstDEI	CTNAG	4 cut(s)	152, 283, 720, 1277
BstDSI	CCRYGG	1 cut(s)	1263
BstENI	CCTNNNNNAGG	1 cut(s)	1025
BstF5I	GGATG	2 cut(s)	438, 863
BstH2I	RGCGCY	1 cut(s)	521
BstHHI	GCGC	2 cut(s)	424, 520
BstKTI	GATC	7 cut(s)	158, 270, 357, 780, 1003, 1399, 1580
BstMAI	GTCTC	3 cut(s)	315, 1214, 1243
BstMBI	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
BstMCI	CGRYCG	1 cut(s)	18
BstMWI	GCNNNNNNNGC	8 cut(s)	395, 656, 950, 959, 968, 1430, 1460, 1561
BstNI	CCWGG	2 cut(s)	217, 1044
BstNSI	RCATGY	2 cut(s)	846, 1139
BstSCI	CCNGG	3 cut(s)	215, 600, 1042
BstSFI	CTRYAG	3 cut(s)	189, 951, 1385
BstSLI	GKGCMC	1 cut(s)	946
BstV1I	GCAGC	7 cut(s)	388, 410, 528, 974, 1151, 1309, 1463
BstV2I	GAAGAC	1 cut(s)	84
BstX2I	RGATCY	2 cut(s)	777, 1396
BstYI	RGATCY	2 cut(s)	777, 1396
BstZI	CGGCCG	1 cut(s)	15
BsuI	GTATCC	1 cut(s)	971
BsuRI	GGCC	2 cut(s)	17, 150
BtgI	CCRYGG	1 cut(s)	1263
BtsCI	GGATG	2 cut(s)	438, 863
BtsI	GCAGTG	2 cut(s)	186, 972
BtsIMutI	CAGTG	5 cut(s)	186, 471, 821, 867, 972
Cac8I	GCNNGC	9 cut(s)	247, 295, 387, 516, 644, 648, 1137, 1562, 1566
CaiI	CAGNNNCTG	2 cut(s)	265, 719
CciI	TCATGA	1 cut(s)	1580
CfoI	GCGC	2 cut(s)	424, 520
Cfr10I	RCCGGY	2 cut(s)	458, 514
Csp6I	GTAC	1 cut(s)	1364
CspAI	ACCGGT	1 cut(s)	458
CviAII	CATG	5 cut(s)	762, 843, 1136, 1436, 1581
CviQI	GTAC	1 cut(s)	1364
DdeI	CTNAG	4 cut(s)	152, 283, 720, 1277
DpnI	GATC	7 cut(s)	157, 269, 356, 779, 1002, 1398, 1579
DpnII	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
EaeI	YGGCCR	1 cut(s)	15
EagI	CGGCCG	1 cut(s)	15
EclXI	CGGCCG	1 cut(s)	15
Eco130I	CCWWGG	1 cut(s)	1464
Eco52I	CGGCCG	1 cut(s)	15
Eco57I	CTGAAG	2 cut(s)	78, 258
Eco88I	CYCGRG	3 cut(s)	415, 1407, 1472
EcoNI	CCTNNNNNAGG	1 cut(s)	1025
EcoRII	CCWGG	2 cut(s)	215, 1042
EcoT14I	CCWWGG	1 cut(s)	1464
ErhI	CCWWGG	1 cut(s)	1464
Esp3I	CGTCTC	1 cut(s)	1214
FaeI	CATG	5 cut(s)	765, 846, 1139, 1439, 1584
FaqI	GGGAC	1 cut(s)	841
FatI	CATG	5 cut(s)	761, 842, 1135, 1435, 1580
FbaI	TGATCA	1 cut(s)	267
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	8 cut(s)	18, 399, 402, 542, 963, 1140, 1323, 1452
FokI	GGATG	2 cut(s)	445, 850
Fsp4HI	GCNGC	8 cut(s)	18, 399, 402, 542, 963, 1140, 1323, 1452
FspBI	CTAG	3 cut(s)	174, 656, 1428
GlaI	GCGC	2 cut(s)	423, 519
GluI	GCNGC	8 cut(s)	18, 399, 402, 542, 963, 1140, 1323, 1452
GsuI	CTGGAG	4 cut(s)	199, 235, 657, 1065
HaeII	RGCGCY	1 cut(s)	521
HaeIII	GGCC	2 cut(s)	17, 150
HapII	CCGG	3 cut(s)	459, 515, 602
HhaI	GCGC	2 cut(s)	424, 520
Hin1I	GRCGYC	2 cut(s)	89, 1207
Hin1II	CATG	5 cut(s)	765, 846, 1139, 1439, 1584
Hin6I	GCGC	2 cut(s)	422, 518
HinP1I	GCGC	2 cut(s)	422, 518
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	3 cut(s)	243, 493, 1558
HinfI	GANTC	5 cut(s)	204, 262, 1013, 1068, 1223
HpaII	CCGG	3 cut(s)	459, 515, 602
HphI	GGTGA	1 cut(s)	1064
Hpy166II	GTNNAC	2 cut(s)	6, 811
Hpy188III	TCNNGA	8 cut(s)	379, 415, 430, 464, 616, 894, 1129, 1581
Hpy8I	GTNNAC	2 cut(s)	6, 811
HpyAV	CCTTC	2 cut(s)	857, 1292
HpyCH4III	ACNGT	6 cut(s)	136, 475, 871, 1237, 1264, 1389
HpyCH4IV	ACGT	2 cut(s)	89, 1207
HpyF10VI	GCNNNNNNNGC	8 cut(s)	395, 656, 950, 959, 968, 1430, 1460, 1561
HpyF3I	CTNAG	4 cut(s)	152, 283, 720, 1277
HpySE526I	ACGT	2 cut(s)	89, 1207
Hsp92I	GRCGYC	2 cut(s)	89, 1207
Hsp92II	CATG	5 cut(s)	765, 846, 1139, 1439, 1584
HspAI	GCGC	2 cut(s)	422, 518
KroI	GCCGGC	1 cut(s)	514
KroNI	GCCGGC	1 cut(s)	516
Ksp22I	TGATCA	1 cut(s)	267
Kzo9I	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
LmnI	GCTCC	4 cut(s)	254, 800, 1046, 1352
Lsp1109I	GCAGC	7 cut(s)	388, 410, 528, 974, 1151, 1309, 1463
LweI	GCATC	6 cut(s)	343, 457, 621, 706, 872, 1433
MaeI	CTAG	3 cut(s)	174, 656, 1428
MaeII	ACGT	2 cut(s)	89, 1207
MaeIII	GTNAC	4 cut(s)	85, 136, 878, 1336
MalI	GATC	7 cut(s)	157, 269, 356, 779, 1002, 1398, 1579
MbiI	CCGCTC	1 cut(s)	1196
MboI	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
MboII	GAAGA	5 cut(s)	84, 251, 741, 925, 928
MflI	RGATCY	2 cut(s)	777, 1396
MhlI	GDGCHC	3 cut(s)	838, 946, 1435
MluCI	AATT	8 cut(s)	58, 374, 450, 930, 1242, 1306, 1357, 1539
MlyI	GAGTC	2 cut(s)	198, 271
MmeI	TCCRAC	2 cut(s)	778, 1135
MroNI	GCCGGC	1 cut(s)	514
MroXI	GAANNNNTTC	1 cut(s)	920
MseI	TTAA	2 cut(s)	408, 588
MslI	CAYNNNNRTG	2 cut(s)	39, 83
MspA1I	CMGCKG	2 cut(s)	401, 1322
MspI	CCGG	3 cut(s)	459, 515, 602
MspR9I	CCNGG	3 cut(s)	217, 602, 1044
MvaI	CCWGG	2 cut(s)	217, 1044
MwoI	GCNNNNNNNGC	8 cut(s)	395, 656, 950, 959, 968, 1430, 1460, 1561
NaeI	GCCGGC	1 cut(s)	516
NciI	CCSGG	1 cut(s)	602
NdeII	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
NgoMIV	GCCGGC	1 cut(s)	514
NlaIII	CATG	5 cut(s)	765, 846, 1139, 1439, 1584
NlaIV	GGNNCC	3 cut(s)	779, 1303, 1470
NmuCI	GTSAC	1 cut(s)	85
NspI	RCATGY	2 cut(s)	846, 1139
NspV	TTCGAA	1 cut(s)	1296
OliI	CACNNNNGTG	1 cut(s)	83
PaeI	GCATGC	1 cut(s)	1139
PagI	TCATGA	1 cut(s)	1580
PdiI	GCCGGC	1 cut(s)	516
PdmI	GAANNNNTTC	1 cut(s)	920
PfeI	GAWTC	3 cut(s)	1013, 1068, 1223
PflFI	GACNNNGTC	1 cut(s)	261
PinAI	ACCGGT	1 cut(s)	458
PkrI	GCNGC	8 cut(s)	19, 400, 403, 543, 964, 1141, 1324, 1453
PleI	GAGTC	2 cut(s)	198, 270
PpsI	GAGTC	2 cut(s)	198, 270
Psp6I	CCWGG	2 cut(s)	215, 1042
PspGI	CCWGG	2 cut(s)	215, 1042
PspN4I	GGNNCC	3 cut(s)	779, 1303, 1470
PsrI	GAACNNNNNNTAC	2 cut(s)	1507, 1539
PstI	CTGCAG	2 cut(s)	193, 955
PstNI	CAGNNNCTG	2 cut(s)	265, 719
PsuI	RGATCY	2 cut(s)	777, 1396
PsyI	GACNNNGTC	1 cut(s)	261
PvuII	CAGCTG	2 cut(s)	401, 1322
RsaI	GTAC	1 cut(s)	1365
RsaNI	GTAC	1 cut(s)	1364
RseI	CAYNNNNRTG	2 cut(s)	39, 83
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	2 cut(s)	408, 588
SatI	GCNGC	8 cut(s)	18, 399, 402, 542, 963, 1140, 1323, 1452
Sau3AI	GATC	7 cut(s)	155, 267, 354, 777, 1000, 1396, 1577
SchI	GAGTC	2 cut(s)	198, 271
ScrFI	CCNGG	3 cut(s)	217, 602, 1044
SduI	GDGCHC	3 cut(s)	838, 946, 1435
SfaNI	GCATC	6 cut(s)	343, 457, 621, 706, 872, 1433
SfcI	CTRYAG	3 cut(s)	189, 951, 1385
SfuI	TTCGAA	1 cut(s)	1296
SmiMI	CAYNNNNRTG	2 cut(s)	39, 83
SpeI	ACTAGT	1 cut(s)	173
SphI	GCATGC	1 cut(s)	1139
Sse9I	AATT	8 cut(s)	58, 374, 450, 930, 1242, 1306, 1357, 1539
SsiI	CCGC	3 cut(s)	18, 46, 1194
SspI	AATATT	1 cut(s)	31
SspMI	CTAG	3 cut(s)	174, 656, 1428
StyD4I	CCNGG	3 cut(s)	215, 600, 1042
StyI	CCWWGG	1 cut(s)	1464
TaaI	ACNGT	6 cut(s)	136, 475, 871, 1237, 1264, 1389
TaiI	ACGT	2 cut(s)	92, 1210
TaqI	TCGA	2 cut(s)	5, 1296
TasI	AATT	8 cut(s)	58, 374, 450, 930, 1242, 1306, 1357, 1539
TatI	WGTACW	1 cut(s)	1363
TauI	GCSGC	1 cut(s)	20
TfiI	GAWTC	3 cut(s)	1013, 1068, 1223
Tru1I	TTAA	2 cut(s)	408, 588
Tru9I	TTAA	2 cut(s)	408, 588
TscAI	CASTG	5 cut(s)	193, 478, 828, 874, 972
TseFI	GTSAC	1 cut(s)	85
TseI	GCWGC	7 cut(s)	398, 401, 541, 962, 1139, 1322, 1451
Tsp45I	GTSAC	1 cut(s)	85
TspDTI	ATGAA	4 cut(s)	23, 517, 1023, 1299
TspRI	CASTG	5 cut(s)	193, 478, 828, 874, 972
Tth111I	GACNNNGTC	1 cut(s)	261
XagI	CCTNNNNNAGG	1 cut(s)	1025
XapI	RAATTY	1 cut(s)	374
XceI	RCATGY	2 cut(s)	846, 1139
XmiI	GTMKAC	1 cut(s)	5
XmnI	GAANNNNTTC	1 cut(s)	920
XspI	CTAG	3 cut(s)	174, 656, 1428
ZraI	GACGTC	2 cut(s)	90, 1208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.