Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005760

Physical Location & Seq

Genomic Coordinates Reverse (-)

26416482 .. 26427493

Gene Structure 11012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0276300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGAACGACGAGAGCCTCCGGCAAGATTTGGACCCCCAAAGCGATCAGAGCTCCGATTACCTCCCACCTCAGCCCCACCACCCTCTCCCTTCCCAACCCCAACCCCAACCCCACCCCCAGCCTCGCCGGCCACGTGGCTTCGCCGCCACAGCCGCAGCCGGCTCGGTGGGCCCCGTCTCTCCCTCCTCCACCAAGGGGGGAAGGAGAGAGAGGGAGAAGGAGAAGGAGCGGACGAAGCTCCGAGAACGCCTCCGCCGATCGATCACCAGCCGTATGCTCGCCGGACTCCGCCAGTACGGCAATTTCCCCCTGCCTGCGCGCGCAGATATGAACGATGTGCTCGCAGCTCTGGCGCGTGAGGCCGGCTGGGTCGTCGAGACTGACGGCACCACTTATCGCCAGTCTCCACCTCAAATTGGAGGAGCGTATTCGATGAGCTTGAGGTCAGTGGAGACTCCAGTGTCAGGTGTTAAAGCACCGTTGGAGTGTCATCCATCATCAGTAGTTAGAATTGATGAGAGTTTGTCTCCGGCTTCGCTTGATTCTGTTGTGATCGGCGAGAAGAATGAGAAGTTTTCGAATAGTAGTCCTGCCATGAACTCTGTAAATTGCTTAGAGACTGATCAGCTCATGCAGCACATTCCTTCTGCTGCAGGGTTTGCACCTGCCCCATACGTCCCTCTCTATGTGACACTTGCAACTGGTTTCGTCAACAATTACTGCCAGTTGGTTGATCCTGAAGGGTTAAGACAGGAGCTGACTCATATGCAATCGCTAAATGCCGATGGTGTTGTTGTGGATTGTTGGTGGGGTATTGTTGAATGCTGGAGCCCCCAGAAATACGATTGGTCCGGTTATAGGGGTCTATTTAACATTGTACGCGAGTTCAAGCTAAAATTACAGGTTGTAATGGCATTTCATGAGTATGGAAGAAGCGAGTCTGGTGAAGCCCTTATTCCTCTTCCGAAGTGGATTTTAGACATTGGTAAAGAAAACCAGGACATATTCTTTACAGATCGAGAAGGAAGGAGGAATACTGAATGTCTATCCTGGGGCGTCGACAAAGAGAGAGTTTTGCATGGAAGAACTGGTGTTGAGGTCTATTTTGATTTCATGAGAAGTTTCCGTACCGAGTTTGATGACTTGTTTGGTGAGGGTCTTATTTCTGCTGTGGAGATTGGACTTGGAGCTTCTGGGGAGCTAAAGTATCCTTCCTTTTCAGAAAGGATGGGATGGAGATATCCTGGTATCGGCGAGTTTCAGTGTTATGATAGATACCTACAACAAAGTCTGCATAAAGCAGCAAAATTGCGTGGGCACTCATTCTGGGCTAGAGGACCAGATAATGCTGGTGAATACAATTCTCGGCCACATGAAACTGGCTTCTTCTGTGAGCGTGGTGATTATGATAGTTACTATGGACGCTTTTTCCTTCATTGGTATGCCAAGACACTAATTGACCATGCAGATAATGTCCTATCTCTTGCAAGCCTTGCCTTTGATGAAACAAAAGTAATTGTCAAGGTTCCTGCTGTTTATTGGTGGTACAAAACACCTAGCCATGCGGCAGAGTTAACTTCTGGGTACTATAATCCTAGAAACCAAGATGGGTACTCTCCAGTGTTTGAAGTTCTGAAGAAACATTCAGTGACGGTTAAGTTTGTTTGCTCGGCACCAAATGATGGTGATGAAGCATTGGGTGATCCAGAAGGTTTGAGTTGGCAGGTTTTAAATTTAGCTTGGGATAGAGGATTGACTGTGGCTGGGGAAAATGCACTGTCATGCTATGATAGAGAAGGGTGCATGAGAATTGTTGAAATGGTGAAGCCAAGAAATGATCCTGATCGCCACCATTTCACATTCTTTGTATATCAGCAACCATCTCCTCTAGTTCAAGGGACAATTTGCTTTTCGGAGTTGGACTTTTTCATCAAGTGCATGCATGGTGACATGGCTGGGAATATAGTGTCGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1674

Protein Analysis

658

Amino Acids

74.12

Weight (kDa)

5.76

Isoelectric Point (pI)

49.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	66 - 205	3.6e-45	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	242 - 615	3.3e-97	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005760)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67490
prunus_persica	Prupe.2G311900_v2.0.a1
pyrus_communis	pycom01g22920
rosa_chinensis	RchiOBHm_Chr1g0381021
rosa_laevigata	RLG00000020376 RLG00000020535 RLG00000026252
rosa_multiflora	Rmu_sc0004494.1_g000002 Rmu_sc0035423.1_g000001 Rmu_ssc0000018.1_g000015
rosa_roxburghii	Rroxscaffold_4G00278850
rosa_rugosa	Rorug01G0065100 Rorug01G0426500 Rorug02G0015100 Rorug07G0276200 Rorug07G0276300
rosa_samantha	Rh1AG450300 Rh1BG406300 Rh1CG420300 Rh1DG436800 Rh7AG312600 Rh7AG431400 Rh7BG404400 Rh7CG331200 Rh7CG450200 Rh7DG420800
rosa_wichuraiana	Rw1G039240 Rw7G035620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	673
AasI	GACNNNNNNGTC	1 cut(s)	460
Acc36I	ACCTGC	2 cut(s)	673, 1714
AccB1I	GGYRCC	2 cut(s)	386, 1672
AccB7I	CCANNNNNTGG	1 cut(s)	1682
AccBSI	CCGCTC	1 cut(s)	229
AccI	GTMKAC	1 cut(s)	1059
AccII	CGCG	4 cut(s)	319, 321, 355, 882
AciI	CCGC	6 cut(s)	144, 153, 229, 253, 289, 1565
AclWI	GGATC	3 cut(s)	728, 1697, 1832
AcoI	YGGCCR	2 cut(s)	128, 1367
AcsI	RAATTY	1 cut(s)	1732
AcuI	CTGAAG	2 cut(s)	759, 1655
AcvI	CACGTG	1 cut(s)	134
AcyI	GRCGYC	1 cut(s)	1056
AfaI	GTAC	6 cut(s)	296, 879, 1129, 1547, 1586, 1613
AfiI	CCNNNNNNNGG	6 cut(s)	195, 416, 464, 858, 1250, 1682
AgsI	TTSAA	5 cut(s)	821, 889, 1628, 1817, 1895
AjnI	CCWGG	3 cut(s)	996, 1049, 1243
Alw21I	GWGCWC	2 cut(s)	53, 342
Alw26I	GTCTC	6 cut(s)	181, 371, 408, 446, 531, 611
AlwI	GGATC	3 cut(s)	728, 1697, 1832
AlwNI	CAGNNNCTG	1 cut(s)	757
AoxI	GGCC	4 cut(s)	128, 169, 360, 1367
ApaI	GGGCCC	1 cut(s)	173
ApeKI	GCWGC	5 cut(s)	155, 344, 634, 650, 1301
ApoI	RAATTY	1 cut(s)	1732
AspLEI	GCGC	4 cut(s)	319, 321, 323, 355
AspS9I	GGNCC	5 cut(s)	31, 169, 170, 849, 1337
AsuHPI	GGTGA	9 cut(s)	256, 956, 1163, 1364, 1412, 1697, 1712, 1834, 1958
AsuII	TTCGAA	1 cut(s)	578
AvaII	GGWCC	3 cut(s)	31, 849, 1337
BaeGI	GKGCMC	2 cut(s)	173, 1320
BanI	GGYRCC	2 cut(s)	386, 1672
BanII	GRGCYC	3 cut(s)	53, 173, 833
BarI	GAAGNNNNNNTAC	4 cut(s)	1018, 1050, 1111, 1143
BbrPI	CACGTG	1 cut(s)	134
Bbv12I	GWGCWC	2 cut(s)	53, 342
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	5 cut(s)	167, 356, 637, 646, 1313
BccI	CCATC	7 cut(s)	502, 779, 1222, 1227, 1601, 1676, 1888
BceAI	ACGGC	3 cut(s)	255, 313, 400
BcgI	CGANNNNNNTGC	2 cut(s)	144, 178
BciT130I	CCWGG	3 cut(s)	998, 1051, 1245
BciVI	GTATCC	1 cut(s)	1218
BclI	TGATCA	1 cut(s)	622
BcoDI	GTCTC	6 cut(s)	181, 371, 408, 446, 531, 611
BfaI	CTAG	4 cut(s)	1332, 1557, 1596, 1889
BfmI	CTRYAG	1 cut(s)	651
BfuAI	ACCTGC	2 cut(s)	673, 1714
BfuI	GTATCC	1 cut(s)	1218
BglI	GCCNNNNNGGC	2 cut(s)	127, 297
BisI	GCNGC	8 cut(s)	144, 153, 156, 345, 635, 651, 1302, 1566
BlsI	GCNGC	8 cut(s)	145, 154, 157, 346, 636, 652, 1303, 1567
Bme1390I	CCNGG	3 cut(s)	998, 1051, 1245
Bme18I	GGWCC	3 cut(s)	31, 849, 1337
BmgT120I	GGNCC	5 cut(s)	31, 169, 170, 849, 1337
BmiI	GGNNCC	7 cut(s)	33, 171, 172, 388, 830, 1527, 1674
BmrFI	CCNGG	3 cut(s)	998, 1051, 1245
BplI	GAGNNNNNCTC	4 cut(s)	234, 266, 511, 543
BpmI	CTGGAG	3 cut(s)	441, 847, 1602
Bpu10I	CCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	1 cut(s)	460
Bsa29I	ATCGAT	1 cut(s)	260
BsaAI	YACGTR	1 cut(s)	134
BsaBI	GATNNNNATC	1 cut(s)	1842
BsaHI	GRCGYC	1 cut(s)	1056
BsaJI	CCNNGG	2 cut(s)	192, 1050
BsaWI	WCCGGW	1 cut(s)	851
BsaXI	ACNNNNNCTCC	2 cut(s)	1190, 1220
Bsc4I	CCNNNNNNNGG	6 cut(s)	195, 416, 464, 858, 1250, 1682
Bse118I	RCCGGY	3 cut(s)	126, 158, 362
Bse1I	ACTGG	8 cut(s)	292, 400, 458, 706, 724, 1093, 1384, 1619
Bse8I	GATNNNNATC	1 cut(s)	1842
BseBI	CCWGG	3 cut(s)	998, 1051, 1245
BseCI	ATCGAT	1 cut(s)	260
BseDI	CCNNGG	2 cut(s)	192, 1050
BseGI	GGATG	3 cut(s)	490, 1233, 1238
BseJI	GATNNNNATC	1 cut(s)	1842
BseLI	CCNNNNNNNGG	6 cut(s)	195, 416, 464, 858, 1250, 1682
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	8 cut(s)	292, 400, 458, 706, 724, 1093, 1384, 1619
BsePI	GCGCGC	2 cut(s)	317, 319
BseRI	GAGGAG	3 cut(s)	175, 435, 1875
BseSI	GKGCMC	2 cut(s)	173, 1320
BseXI	GCAGC	5 cut(s)	167, 356, 637, 646, 1313
BseYI	CCCAGC	4 cut(s)	117, 366, 1763, 1955
Bsh1236I	CGCG	4 cut(s)	319, 321, 355, 882
Bsh1285I	CGRYCG	1 cut(s)	260
BshFI	GGCC	4 cut(s)	130, 171, 362, 1369
BshNI	GGYRCC	2 cut(s)	386, 1672
BshVI	ATCGAT	1 cut(s)	260
BsiEI	CGRYCG	1 cut(s)	260
BsiHKAI	GWGCWC	2 cut(s)	53, 342
BsiSI	CCGG	7 cut(s)	19, 127, 159, 282, 363, 530, 852
BslFI	GGGAC	2 cut(s)	662, 1912
BslI	CCNNNNNNNGG	6 cut(s)	195, 416, 464, 858, 1250, 1682
BsmAI	GTCTC	6 cut(s)	181, 371, 408, 446, 531, 611
BsmBI	CGTCTC	1 cut(s)	181
BsmFI	GGGAC	2 cut(s)	662, 1912
BsmI	GAATGC	1 cut(s)	827
BsnI	GGCC	4 cut(s)	130, 171, 362, 1369
Bsp119I	TTCGAA	1 cut(s)	578
Bsp120I	GGGCCC	1 cut(s)	169
Bsp1286I	GDGCHC	5 cut(s)	53, 173, 342, 833, 1320
BspACI	CCGC	6 cut(s)	144, 153, 229, 253, 289, 1565
BspANI	GGCC	4 cut(s)	130, 171, 362, 1369
BspCNI	CTCAG	1 cut(s)	82
BspDI	ATCGAT	1 cut(s)	260
BspFNI	CGCG	4 cut(s)	319, 321, 355, 882
BspHI	TCATGA	2 cut(s)	919, 1113
BspLI	GGNNCC	7 cut(s)	33, 171, 172, 388, 830, 1527, 1674
BspMAI	CTGCAG	1 cut(s)	655
BspMI	ACCTGC	2 cut(s)	673, 1714
BspPI	GGATC	3 cut(s)	728, 1697, 1832
BspT104I	TTCGAA	1 cut(s)	578
BspT107I	GGYRCC	2 cut(s)	386, 1672
BsrBI	CCGCTC	1 cut(s)	229
BsrFI	RCCGGY	3 cut(s)	126, 158, 362
BsrI	ACTGG	8 cut(s)	292, 400, 458, 706, 724, 1093, 1384, 1619
BssAI	RCCGGY	3 cut(s)	126, 158, 362
BssECI	CCNNGG	2 cut(s)	192, 1050
BssHII	GCGCGC	2 cut(s)	317, 319
BssNI	GRCGYC	1 cut(s)	1056
BssT1I	CCWWGG	1 cut(s)	192
Bst2UI	CCWGG	3 cut(s)	998, 1051, 1245
Bst4CI	ACNGT	4 cut(s)	480, 1654, 1759, 1779
Bst6I	CTCTTC	1 cut(s)	966
BstACI	GRCGYC	1 cut(s)	1056
BstAPI	GCANNNNNTGC	2 cut(s)	659, 1493
BstBAI	YACGTR	1 cut(s)	134
BstBI	TTCGAA	1 cut(s)	578
BstDEI	CTNAG	2 cut(s)	69, 613
BstF5I	GGATG	3 cut(s)	490, 1233, 1238
BstFNI	CGCG	4 cut(s)	319, 321, 355, 882
BstHHI	GCGC	4 cut(s)	319, 321, 323, 355
BstMAI	GTCTC	6 cut(s)	181, 371, 408, 446, 531, 611
BstMCI	CGRYCG	1 cut(s)	260
BstNI	CCWGG	3 cut(s)	998, 1051, 1245
BstNSI	RCATGY	1 cut(s)	1942
BstSCI	CCNGG	3 cut(s)	996, 1049, 1243
BstSFI	CTRYAG	1 cut(s)	651
BstSLI	GKGCMC	2 cut(s)	173, 1320
BstUI	CGCG	4 cut(s)	319, 321, 355, 882
BstV1I	GCAGC	5 cut(s)	167, 356, 637, 646, 1313
Bsu15I	ATCGAT	1 cut(s)	260
BsuI	GTATCC	1 cut(s)	1218
BsuRI	GGCC	4 cut(s)	130, 171, 362, 1369
BsuTUI	ATCGAT	1 cut(s)	260
BtsCI	GGATG	3 cut(s)	490, 1233, 1238
BtsIMutI	CAGTG	6 cut(s)	453, 465, 1268, 1626, 1653, 1775
BveI	ACCTGC	2 cut(s)	673, 1714
CaiI	CAGNNNCTG	1 cut(s)	757
CciI	TCATGA	2 cut(s)	919, 1113
CfoI	GCGC	4 cut(s)	319, 321, 323, 355
Cfr10I	RCCGGY	3 cut(s)	126, 158, 362
Cfr13I	GGNCC	5 cut(s)	31, 169, 170, 849, 1337
ClaI	ATCGAT	1 cut(s)	260
CseI	GACGC	2 cut(s)	1045, 1431
Csp6I	GTAC	6 cut(s)	295, 878, 1128, 1546, 1585, 1612
CviQI	GTAC	6 cut(s)	295, 878, 1128, 1546, 1585, 1612
DdeI	CTNAG	2 cut(s)	69, 613
DraI	TTTAAA	1 cut(s)	1731
DrdI	GACNNNNNNGTC	1 cut(s)	460
DseDI	GACNNNNNNGTC	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	128, 1367
Eam1104I	CTCTTC	1 cut(s)	966
EarI	CTCTTC	1 cut(s)	966
EciI	GGCGGA	2 cut(s)	242, 278
Ecl136II	GAGCTC	1 cut(s)	51
Eco130I	CCWWGG	1 cut(s)	192
Eco24I	GRGCYC	3 cut(s)	53, 173, 833
Eco32I	GATATC	1 cut(s)	1241
Eco47I	GGWCC	3 cut(s)	31, 849, 1337
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	2 cut(s)	759, 1655
Eco72I	CACGTG	1 cut(s)	134
EcoICRI	GAGCTC	1 cut(s)	51
EcoO109I	RGGNCCY	1 cut(s)	170
EcoRII	CCWGG	3 cut(s)	996, 1049, 1243
EcoRV	GATATC	1 cut(s)	1241
EcoT14I	CCWWGG	1 cut(s)	192
EcoT22I	ATGCAT	1 cut(s)	1944
EcoT38I	GRGCYC	3 cut(s)	53, 173, 833
ErhI	CCWWGG	1 cut(s)	192
Esp3I	CGTCTC	1 cut(s)	181
FaqI	GGGAC	2 cut(s)	662, 1912
FauNDI	CATATG	1 cut(s)	765
FbaI	TGATCA	1 cut(s)	622
FblI	GTMKAC	1 cut(s)	1059
Fnu4HI	GCNGC	8 cut(s)	144, 153, 156, 345, 635, 651, 1302, 1566
FokI	GGATG	3 cut(s)	477, 1240, 1245
FriOI	GRGCYC	3 cut(s)	53, 173, 833
Fsp4HI	GCNGC	8 cut(s)	144, 153, 156, 345, 635, 651, 1302, 1566
FspBI	CTAG	4 cut(s)	1332, 1557, 1596, 1889
GlaI	GCGC	4 cut(s)	318, 320, 322, 354
GluI	GCNGC	8 cut(s)	144, 153, 156, 345, 635, 651, 1302, 1566
GsaI	CCCAGC	4 cut(s)	121, 370, 1767, 1959
GsuI	CTGGAG	3 cut(s)	441, 847, 1602
HaeIII	GGCC	4 cut(s)	130, 171, 362, 1369
HapII	CCGG	7 cut(s)	19, 127, 159, 282, 363, 530, 852
HgaI	GACGC	2 cut(s)	1045, 1431
HhaI	GCGC	4 cut(s)	319, 321, 323, 355
Hin1I	GRCGYC	1 cut(s)	1056
Hin6I	GCGC	4 cut(s)	317, 319, 321, 353
HinP1I	GCGC	4 cut(s)	317, 319, 321, 353
HincII	GTYRAC	3 cut(s)	712, 1060, 1575
HindII	GTYRAC	3 cut(s)	712, 1060, 1575
HinfI	GANTC	5 cut(s)	285, 454, 542, 760, 938
HpaI	GTTAAC	1 cut(s)	1575
HpaII	CCGG	7 cut(s)	19, 127, 159, 282, 363, 530, 852
HphI	GGTGA	9 cut(s)	256, 956, 1163, 1364, 1412, 1697, 1712, 1834, 1958
Hpy166II	GTNNAC	3 cut(s)	712, 1060, 1575
Hpy188I	TCNGA	7 cut(s)	48, 55, 242, 966, 1222, 1635, 1915
Hpy188III	TCNNGA	7 cut(s)	376, 737, 920, 1019, 1114, 1706, 1841
Hpy8I	GTNNAC	3 cut(s)	712, 1060, 1575
Hpy99I	CGWCG	3 cut(s)	11, 377, 1061
HpyCH4III	ACNGT	4 cut(s)	480, 1654, 1759, 1779
HpyCH4IV	ACGT	2 cut(s)	133, 675
HpyF3I	CTNAG	2 cut(s)	69, 613
HpySE526I	ACGT	2 cut(s)	133, 675
Hsp92I	GRCGYC	1 cut(s)	1056
HspAI	GCGC	4 cut(s)	317, 319, 321, 353
KroI	GCCGGC	3 cut(s)	126, 158, 362
KroNI	GCCGGC	3 cut(s)	128, 160, 364
Ksp22I	TGATCA	1 cut(s)	622
KspAI	GTTAAC	1 cut(s)	1575
LmnI	GCTCC	8 cut(s)	56, 226, 243, 422, 754, 828, 1187, 1198
Lsp1109I	GCAGC	5 cut(s)	167, 356, 637, 646, 1313
MaeI	CTAG	4 cut(s)	1332, 1557, 1596, 1889
MaeII	ACGT	2 cut(s)	133, 675
MaeIII	GTNAC	4 cut(s)	688, 1412, 1648, 1946
MbiI	CCGCTC	1 cut(s)	229
MboII	GAAGA	6 cut(s)	574, 942, 953, 1095, 1378, 1648
MhlI	GDGCHC	5 cut(s)	53, 173, 342, 833, 1320
MlyI	GAGTC	4 cut(s)	279, 448, 754, 947
MmeI	TCCRAC	2 cut(s)	462, 1899
Mph1103I	ATGCAT	1 cut(s)	1944
MroNI	GCCGGC	3 cut(s)	126, 158, 362
MseI	TTAA	6 cut(s)	471, 746, 870, 1574, 1656, 1730
MslI	CAYNNNNRTG	3 cut(s)	924, 1440, 1780
MspI	CCGG	7 cut(s)	19, 127, 159, 282, 363, 530, 852
MspR9I	CCNGG	3 cut(s)	998, 1051, 1245
Mva1269I	GAATGC	1 cut(s)	827
MvaI	CCWGG	3 cut(s)	998, 1051, 1245
MvnI	CGCG	4 cut(s)	319, 321, 355, 882
NaeI	GCCGGC	3 cut(s)	128, 160, 364
NdeI	CATATG	1 cut(s)	765
NgoMIV	GCCGGC	3 cut(s)	126, 158, 362
NlaIV	GGNNCC	7 cut(s)	33, 171, 172, 388, 830, 1527, 1674
NmeAIII	GCCGAG	2 cut(s)	1345, 1649
NmuCI	GTSAC	3 cut(s)	688, 1648, 1946
NsiI	ATGCAT	1 cut(s)	1944
NspI	RCATGY	1 cut(s)	1942
NspV	TTCGAA	1 cut(s)	578
PaeI	GCATGC	1 cut(s)	1942
PagI	TCATGA	2 cut(s)	919, 1113
PaqCI	CACCTGC	1 cut(s)	673
PauI	GCGCGC	2 cut(s)	317, 319
PcsI	WCGNNNNNNNCGW	2 cut(s)	130, 253
PctI	GAATGC	1 cut(s)	827
PdiI	GCCGGC	3 cut(s)	128, 160, 364
PfeI	GAWTC	1 cut(s)	542
PflMI	CCANNNNNTGG	1 cut(s)	1682
PkrI	GCNGC	8 cut(s)	145, 154, 157, 346, 636, 652, 1303, 1567
Ple19I	CGATCG	1 cut(s)	260
PleI	GAGTC	4 cut(s)	279, 448, 754, 946
PmaCI	CACGTG	1 cut(s)	134
PmlI	CACGTG	1 cut(s)	134
PpsI	GAGTC	4 cut(s)	279, 448, 754, 946
Ppu21I	YACGTR	1 cut(s)	134
Psp124BI	GAGCTC	1 cut(s)	53
Psp6I	CCWGG	3 cut(s)	996, 1049, 1243
PspCI	CACGTG	1 cut(s)	134
PspFI	CCCAGC	4 cut(s)	117, 366, 1763, 1955
PspGI	CCWGG	3 cut(s)	996, 1049, 1243
PspN4I	GGNNCC	7 cut(s)	33, 171, 172, 388, 830, 1527, 1674
PspOMI	GGGCCC	1 cut(s)	169
PspPI	GGNCC	5 cut(s)	31, 169, 170, 849, 1337
PstI	CTGCAG	1 cut(s)	655
PstNI	CAGNNNCTG	1 cut(s)	757
PteI	GCGCGC	2 cut(s)	317, 319
PvuI	CGATCG	1 cut(s)	260
RsaI	GTAC	6 cut(s)	296, 879, 1129, 1547, 1586, 1613
RsaNI	GTAC	6 cut(s)	295, 878, 1128, 1546, 1585, 1612
RseI	CAYNNNNRTG	3 cut(s)	924, 1440, 1780
SacI	GAGCTC	1 cut(s)	53
SalI	GTCGAC	1 cut(s)	1058
SaqAI	TTAA	6 cut(s)	471, 746, 870, 1574, 1656, 1730
SatI	GCNGC	8 cut(s)	144, 153, 156, 345, 635, 651, 1302, 1566
Sau96I	GGNCC	5 cut(s)	31, 169, 170, 849, 1337
SchI	GAGTC	4 cut(s)	279, 448, 754, 947
ScrFI	CCNGG	3 cut(s)	998, 1051, 1245
SduI	GDGCHC	5 cut(s)	53, 173, 342, 833, 1320
SfcI	CTRYAG	1 cut(s)	651
SfuI	TTCGAA	1 cut(s)	578
SinI	GGWCC	3 cut(s)	31, 849, 1337
SmiMI	CAYNNNNRTG	3 cut(s)	924, 1440, 1780
SmlI	CTYRAG	1 cut(s)	439
SmoI	CTYRAG	1 cut(s)	439
SphI	GCATGC	1 cut(s)	1942
SsiI	CCGC	6 cut(s)	144, 153, 229, 253, 289, 1565
SspMI	CTAG	4 cut(s)	1332, 1557, 1596, 1889
SstI	GAGCTC	1 cut(s)	53
StyD4I	CCNGG	3 cut(s)	996, 1049, 1243
StyI	CCWWGG	1 cut(s)	192
TaaI	ACNGT	4 cut(s)	480, 1654, 1759, 1779
TaiI	ACGT	2 cut(s)	136, 678
TaqI	TCGA	6 cut(s)	260, 375, 431, 578, 1018, 1059
TauI	GCSGC	3 cut(s)	146, 155, 1568
TfiI	GAWTC	1 cut(s)	542
Tru1I	TTAA	6 cut(s)	471, 746, 870, 1574, 1656, 1730
Tru9I	TTAA	6 cut(s)	471, 746, 870, 1574, 1656, 1730
TscAI	CASTG	6 cut(s)	453, 465, 1268, 1626, 1653, 1782
TseFI	GTSAC	3 cut(s)	688, 1648, 1946
TseI	GCWGC	5 cut(s)	155, 344, 634, 650, 1301
Tsp45I	GTSAC	3 cut(s)	688, 1648, 1946
TspGWI	ACGGA	1 cut(s)	1115
TspRI	CASTG	6 cut(s)	453, 465, 1268, 1626, 1653, 1782
Van91I	CCANNNNNTGG	1 cut(s)	1682
VpaK11BI	GGWCC	3 cut(s)	31, 849, 1337
XapI	RAATTY	1 cut(s)	1732
XceI	RCATGY	1 cut(s)	1942
XmiI	GTMKAC	1 cut(s)	1059
XspI	CTAG	4 cut(s)	1332, 1557, 1596, 1889
Zsp2I	ATGCAT	1 cut(s)	1944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.