Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003380

Physical Location & Seq

Genomic Coordinates Reverse (-)

1270263 .. 1278967

Gene Structure 8705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0015100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGCGGAGGCGCCGCCGACGACATCGCATCACCGGAGATCGTTGTCCGACTTTGCCGCCGTGTCGCTGAGCGGACTGTTCGGAGGCGGAGGAGGAGGAGGAGATGATCAGAGAGGCGGAGGCGGAGGCGGAGGAGGAGGTGGAGGAGTAGTAGGCGGAGGGTCGACGTTTGAGTATTTCGGTTGGGTGTATCATTTGGGAGTCAATTCCATCGGCCACGAGTACTGTCACCTCCGGTTTCTCTTCATCCGAGGCAAGTATGTCGAGATGTACAAGCGTGATCCTCACGAAAACCCAGGCATTAAACCTATTAGGAGGGGCGTTGTTGGACCTACACTGATGCTAGAGGAGGTTGGGCGTCGGAAGGTGTACTATGGGGATGTTTATGTTCTGCGGTTTTACAATCGATTGGACGAATCAAAGAAGGGGGAAATTGCTTGTGCTACGGCTGAAGAAGCCCAGAAATGGCTGGAGGCATTTGACCAATCCAAGCAACAGGCTGAGTATGAGCTGATAAGAGGAGGTAGTGCCAGAAACAAACTGAGCATGGAATCCGAGATCAACCTTGATGAACATCGACCTAGAGTGAGGCGCTATGCAAGCGGATTGAAAAGGCTTATAAAAATTGGGCAAGGACCAGAAGTCCTTTTGAGCCAATCCTCAAACCGTGCAAATGGTGGTCCAGATGGATATTATGAGAGGGATGGTGGAGATGCAATTGAGACATATCAGTGGAAGTGTGTACGAACAATTAATGGTGTTAGGATATTTGAAGATGTTGCTAACTCTGAGACTGGTAAAGGTGTTATTGTCAAGGCTGTTGGTGTTATCGAGGCAAGTGCAGATACTGCTTTTGAAGTGCTTTTAAACCTTGAGAAACATCAGAGATATGAGTGGGATATGCTGACAGGAGACTTAGAGCTGCTTGATTCTTATGATGGACACTACGATGTTGTCTATGGGACATTTGATCCCAGGTATCTTACTCGGTGGCATTCCAAGAGAGATTTTATATTTTCTAGGCAATGGTTTCGCGGACAGGATGGAGCATATACAATCCTGCATTTCCCAGCTGTTCATAAGAAGAAGCCTCCAAGATCTGGATATCGTCGCACAAAAATAAATCCATCTACTTGGGAGATTAGAAATTTGAATTCATCCATGGGTTCAGATAGTCCAAGATGTCTCGTCACGCAAATGTTGGAGATACATTCTGCAGGCTGGAGCAGATGGAAGAAAAGTCACTGCTCAAAGTTCGAGAGGAGTGTACCTTATGCATTGTTGTGCCAAGTAGGAGGTATGAAGGAATATATTGGAGCAAATCCTGCACTAAAATGTGAATCTTCTGCTACATTTGTCCAATCAAAGCTATCATCAGTTTCCATTTCGAATGCTGAATACAATGAGTCAGATGTAAAGGATGAGTTTTACGATGCAATTTCTACAGACTCTTCATCTTCGGATGAAGAAGAAAGTGAGAATGGCGCACTTGACAAAAAGGAAGCAAAATTGAAACTGAAGAAAACTTCAGCTGCAGATGCTAATAAGGAACTGGATTCTGAAGTGGCTCCTGTCATGATTGATCCGAGCCAGTTCTCTGTTTCATTGTGCAAAGGGAAGGATGATGCTGACACAAACTGCTGGTCAACTCCAAGCGGCAAGGGATTTATGATCAGAGGAAAGAACTACCTAAAGGACAATTCCAAGGTCACGGGAGGAGATCCCCTTCTTAATCTCGTAGGAGTAGATTGGTTCAAAGTTGATAAAACCATGGATAGTATTGCACTTCATCCCCGGTGTCTTGTTCAGTCAGAAGCCGGAAAGAAGCTTCCATTCGTACTAGTCATCAATCTCCAGGTTCCTGCAAAGCCAAACTATAGTTTGGTACTTTACTATGCTGCTGACAGACCTCCAAAGCCAGATTCTCTGTTTTCTAAATTTGTGGATGGGAATGACATGTTTCGCAATGCAAGATTCAAGTTGATTCCCAGTATTGTTGAGGGATATTGGATGGTCAAGCGTGCTGTTGGAACAAAAGCTTGCCTGCTGGGAAAAGCTGTGACTTGCAAATATCTCAGACAAGACAATTTCCTAGAGATTGATGTCGATATTGGATCATCATCTGTGGCAAGGAGTGTCATCGGACTTGTCTTAGGATATGTCACGAGCATAGTTGTTGATCTTGCAATTTTGATAGAGGCAAGGGAGGAGGAAGAGTTGCCCGAGTACATTCTTGGGACTGTTCGACTAAATCGTTTGAAGCTCGAGTCTGCTGTTCATTTGGAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA

Protein Analysis

763

Amino Acids

84.87

Weight (kDa)

6.98

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	267 - 409	6e-06	START domain
EDR2_C	PF07059	548 - 753	6.8e-78	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29080
fragaria_vesca	FvH4_1g05630 FvH4_6g31930
malus_domestica	MD02G1057200.v1.1 MD09G1208000.v1.1 MD15G1191800.v1.1 MD17G1189100.v1.1
prunus_persica	Prupe.3G064200_v2.0.a1 Prupe.7G225600_v2.0.a1
pyrus_communis	pycom02g04630 pycom09g12420 pycom15g17170 pycom17g19740
rosa_chinensis	RchiOBHm_Chr2g0091261 RchiOBHm_Chr2g0139301
rosa_laevigata	RLG00000016198 RLG00000019806
rosa_multiflora	Rmu_sc0002270.1_g000025 Rmu_sc0002525.1_g000008
rosa_roxburghii	Rroxscaffold_2G00105480 Rroxscaffold_2G00150310
rosa_rugosa	Rorug02G0015100 Rorug02G0015200 Rorug02G0356800 Rorug02G0356900
rosa_samantha	Rh2AG060800 Rh2AG406600 Rh2BG059500 Rh2BG417000 Rh2CG061400 Rh2CG392800 Rh2DG060100 Rh2DG426100
rosa_wichuraiana	Rw2G004900 Rw2G032950 Rw2G033210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	620
AccB1I	GGYRCC	1 cut(s)	10
AccB7I	CCANNNNNTGG	1 cut(s)	1100
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	164
AccII	CGCG	1 cut(s)	1035
AclWI	GGATC	5 cut(s)	275, 965, 1577, 1715, 2122
AcoI	YGGCCR	1 cut(s)	214
AcsI	RAATTY	3 cut(s)	1147, 1153, 1937
AcuI	CTGAAG	4 cut(s)	471, 1512, 1538, 1581
AcyI	GRCGYC	2 cut(s)	11, 358
AfaI	GTAC	8 cut(s)	224, 272, 371, 744, 1269, 1839, 1887, 2228
AfiI	CCNNNNNNNGG	2 cut(s)	465, 1100
AflIII	ACRYGT	1 cut(s)	1956
AgsI	TTSAA	8 cut(s)	610, 773, 857, 1153, 1513, 1756, 1978, 2260
AhdI	GACNNNNNGTC	1 cut(s)	641
AhlI	ACTAGT	1 cut(s)	1840
AjnI	CCWGG	3 cut(s)	295, 974, 1854
AjuI	GAANNNNNNNTTGG	2 cut(s)	1906, 1938
AluBI	AGCT	9 cut(s)	511, 922, 1073, 1369, 1532, 1828, 2039, 2057, 2263
AluI	AGCT	9 cut(s)	511, 922, 1073, 1369, 1532, 1828, 2039, 2057, 2263
Alw26I	GTCTC	4 cut(s)	716, 785, 906, 1190
AlwI	GGATC	5 cut(s)	275, 965, 1577, 1715, 2122
AlwNI	CAGNNNCTG	1 cut(s)	848
Ama87I	CYCGRG	2 cut(s)	2222, 2264
AoxI	GGCC	1 cut(s)	214
ApeKI	GCWGC	3 cut(s)	922, 1532, 1898
ApoI	RAATTY	3 cut(s)	1147, 1153, 1937
ArsI	GACNNNNNNTTYG	2 cut(s)	1628, 1660
AseI	ATTAAT	1 cut(s)	753
AspLEI	GCGC	3 cut(s)	13, 594, 1487
AspS9I	GGNCC	3 cut(s)	329, 635, 680
AsuC2I	CCSGG	1 cut(s)	1795
AsuHPI	GGTGA	2 cut(s)	23, 221
AsuII	TTCGAA	1 cut(s)	1388
AvaI	CYCGRG	2 cut(s)	2222, 2264
AvaII	GGWCC	3 cut(s)	329, 635, 680
BanI	GGYRCC	1 cut(s)	10
BauI	CACGAG	2 cut(s)	218, 2164
BbvI	GCAGC	3 cut(s)	909, 1519, 1885
BccI	CCATC	9 cut(s)	218, 680, 698, 932, 1037, 1135, 1224, 1940, 2005
BceAI	ACGGC	2 cut(s)	44, 462
BcgI	CGANNNNNNTGC	6 cut(s)	244, 278, 821, 855, 1013, 1047
BciT130I	CCWGG	3 cut(s)	297, 976, 1856
BclI	TGATCA	2 cut(s)	106, 1671
BcnI	CCSGG	1 cut(s)	1795
BcoDI	GTCTC	4 cut(s)	716, 785, 906, 1190
BcuI	ACTAGT	1 cut(s)	1840
BfaI	CTAG	5 cut(s)	344, 582, 1020, 1841, 2093
BfmI	CTRYAG	4 cut(s)	1215, 1443, 1533, 1876
BfoI	RGCGCY	2 cut(s)	14, 595
BglII	AGATCT	1 cut(s)	1097
BisI	GCNGC	6 cut(s)	14, 57, 923, 1533, 1657, 1899
BlpI	GCTNAGC	1 cut(s)	68
BlsI	GCNGC	6 cut(s)	15, 58, 924, 1534, 1658, 1900
BmcAI	AGTACT	1 cut(s)	224
Bme1390I	CCNGG	4 cut(s)	297, 976, 1795, 1856
Bme18I	GGWCC	3 cut(s)	329, 635, 680
BmeRI	GACNNNNNGTC	1 cut(s)	641
BmeT110I	CYCGRG	2 cut(s)	2222, 2264
BmgT120I	GGNCC	3 cut(s)	329, 635, 680
BmiI	GGNNCC	3 cut(s)	12, 1569, 1860
BmrFI	CCNGG	4 cut(s)	297, 976, 1795, 1856
BmrI	ACTGGG	1 cut(s)	1983
BmsI	GCATC	6 cut(s)	37, 330, 703, 1423, 1528, 1615
BmuI	ACTGGG	1 cut(s)	1983
BpmI	CTGGAG	3 cut(s)	491, 1243, 1838
Bpu1102I	GCTNAGC	1 cut(s)	68
Bpu14I	TTCGAA	1 cut(s)	1388
BpuEI	CTTGAG	1 cut(s)	893
BpuMI	CCSGG	1 cut(s)	1795
Bsa29I	ATCGAT	1 cut(s)	406
BsaBI	GATNNNNATC	2 cut(s)	573, 2119
BsaHI	GRCGYC	2 cut(s)	11, 358
BsaJI	CCNNGG	7 cut(s)	250, 295, 974, 1161, 1704, 1770, 1793
BsaWI	WCCGGW	2 cut(s)	33, 234
BsaXI	ACNNNNNCTCC	4 cut(s)	135, 165, 2201, 2231
Bsc4I	CCNNNNNNNGG	2 cut(s)	465, 1100
Bse1I	ACTGG	4 cut(s)	799, 1557, 1591, 1989
Bse3DI	GCAATG	2 cut(s)	1031, 1972
Bse8I	GATNNNNATC	2 cut(s)	573, 2119
BseBI	CCWGG	3 cut(s)	297, 976, 1856
BseCI	ATCGAT	1 cut(s)	406
BseDI	CCNNGG	7 cut(s)	250, 295, 974, 1161, 1704, 1770, 1793
BseJI	GATNNNNATC	2 cut(s)	573, 2119
BseLI	CCNNNNNNNGG	2 cut(s)	465, 1100
BseMI	GCAATG	2 cut(s)	1031, 1972
BseMII	CTCAG	5 cut(s)	59, 492, 533, 780, 2089
BseNI	ACTGG	4 cut(s)	799, 1557, 1591, 1989
BseXI	GCAGC	3 cut(s)	909, 1519, 1885
BseYI	CCCAGC	2 cut(s)	1069, 2047
BsgI	GTGCAG	2 cut(s)	861, 1311
Bsh1236I	CGCG	1 cut(s)	1035
BshFI	GGCC	1 cut(s)	216
BshNI	GGYRCC	1 cut(s)	10
BshVI	ATCGAT	1 cut(s)	406
BsiHKCI	CYCGRG	2 cut(s)	2222, 2264
BsiSI	CCGG	4 cut(s)	34, 235, 1795, 1818
BslFI	GGGAC	2 cut(s)	976, 2251
BslI	CCNNNNNNNGG	2 cut(s)	465, 1100
BsmAI	GTCTC	4 cut(s)	716, 785, 906, 1190
BsmFI	GGGAC	2 cut(s)	976, 2251
BsmI	GAATGC	2 cut(s)	994, 1396
BsnI	GGCC	1 cut(s)	216
BsoBI	CYCGRG	2 cut(s)	2222, 2264
Bsp119I	TTCGAA	1 cut(s)	1388
Bsp1407I	TGTACA	1 cut(s)	270
Bsp1720I	GCTNAGC	1 cut(s)	68
Bsp19I	CCATGG	2 cut(s)	1161, 1770
BspANI	GGCC	1 cut(s)	216
BspCNI	CTCAG	5 cut(s)	60, 493, 534, 781, 2088
BspDI	ATCGAT	1 cut(s)	406
BspFNI	CGCG	1 cut(s)	1035
BspHI	TCATGA	1 cut(s)	1575
BspLI	GGNNCC	3 cut(s)	12, 1569, 1860
BspMAI	CTGCAG	2 cut(s)	1219, 1537
BspPI	GGATC	5 cut(s)	275, 965, 1577, 1715, 2122
BspT104I	TTCGAA	1 cut(s)	1388
BspT107I	GGYRCC	1 cut(s)	10
BsrBI	CCGCTC	1 cut(s)	72
BsrDI	GCAATG	2 cut(s)	1031, 1972
BsrGI	TGTACA	1 cut(s)	270
BsrI	ACTGG	4 cut(s)	799, 1557, 1591, 1989
BssECI	CCNNGG	7 cut(s)	250, 295, 974, 1161, 1704, 1770, 1793
BssNI	GRCGYC	2 cut(s)	11, 358
BssSI	CACGAG	2 cut(s)	218, 2164
BssT1I	CCWWGG	3 cut(s)	1161, 1704, 1770
Bst2BI	CACGAG	2 cut(s)	218, 2164
Bst2UI	CCWGG	3 cut(s)	297, 976, 1856
Bst4CI	ACNGT	4 cut(s)	78, 227, 668, 2242
Bst6I	CTCTTC	3 cut(s)	248, 1456, 2208
BstACI	GRCGYC	2 cut(s)	11, 358
BstAPI	GCANNNNNTGC	2 cut(s)	848, 1325
BstAUI	TGTACA	1 cut(s)	270
BstBI	TTCGAA	1 cut(s)	1388
BstC8I	GCNNGC	5 cut(s)	601, 1219, 2022, 2041, 2045
BstDEI	CTNAG	7 cut(s)	68, 501, 542, 789, 916, 2075, 2152
BstDSI	CCRYGG	2 cut(s)	1161, 1770
BstFNI	CGCG	1 cut(s)	1035
BstH2I	RGCGCY	2 cut(s)	14, 595
BstHHI	GCGC	3 cut(s)	13, 594, 1487
BstMAI	GTCTC	4 cut(s)	716, 785, 906, 1190
BstMWI	GCNNNNNNNGC	5 cut(s)	455, 600, 848, 1325, 1538
BstNI	CCWGG	3 cut(s)	297, 976, 1856
BstNSI	RCATGY	1 cut(s)	1960
BstSCI	CCNGG	4 cut(s)	295, 974, 1793, 1854
BstSFI	CTRYAG	4 cut(s)	1215, 1443, 1533, 1876
BstUI	CGCG	1 cut(s)	1035
BstV1I	GCAGC	3 cut(s)	909, 1519, 1885
BstX2I	RGATCY	2 cut(s)	1097, 1720
BstXI	CCANNNNNNTGG	1 cut(s)	1134
BstYI	RGATCY	2 cut(s)	1097, 1720
Bsu15I	ATCGAT	1 cut(s)	406
BsuRI	GGCC	1 cut(s)	216
BsuTUI	ATCGAT	1 cut(s)	406
BtgI	CCRYGG	2 cut(s)	1161, 1770
BtgZI	GCGATG	1 cut(s)	9
BtsI	GCAGTG	1 cut(s)	1243
BtsIMutI	CAGTG	3 cut(s)	335, 737, 1243
Cac8I	GCNNGC	5 cut(s)	601, 1219, 2022, 2041, 2045
CaiI	CAGNNNCTG	1 cut(s)	848
CciI	TCATGA	1 cut(s)	1575
CfoI	GCGC	3 cut(s)	13, 594, 1487
Cfr13I	GGNCC	3 cut(s)	329, 635, 680
ClaI	ATCGAT	1 cut(s)	406
CseI	GACGC	1 cut(s)	347
Csp6I	GTAC	8 cut(s)	223, 271, 370, 743, 1268, 1838, 1886, 2227
CviAII	CATG	5 cut(s)	547, 1162, 1576, 1771, 1957
CviQI	GTAC	8 cut(s)	223, 271, 370, 743, 1268, 1838, 1886, 2227
DdeI	CTNAG	7 cut(s)	68, 501, 542, 789, 916, 2075, 2152
DinI	GGCGCC	1 cut(s)	12
DraI	TTTAAA	1 cut(s)	867
DriI	GACNNNNNGTC	1 cut(s)	641
EaeI	YGGCCR	1 cut(s)	214
Eam1104I	CTCTTC	3 cut(s)	248, 1456, 2208
Eam1105I	GACNNNNNGTC	1 cut(s)	641
EarI	CTCTTC	3 cut(s)	248, 1456, 2208
EciI	GGCGGA	6 cut(s)	20, 102, 132, 138, 144, 171
Eco130I	CCWWGG	3 cut(s)	1161, 1704, 1770
Eco32I	GATATC	1 cut(s)	1106
Eco47I	GGWCC	3 cut(s)	329, 635, 680
Eco57I	CTGAAG	4 cut(s)	471, 1512, 1538, 1581
Eco88I	CYCGRG	2 cut(s)	2222, 2264
EcoRI	GAATTC	1 cut(s)	1153
EcoRII	CCWGG	3 cut(s)	295, 974, 1854
EcoRV	GATATC	1 cut(s)	1106
EcoT14I	CCWWGG	3 cut(s)	1161, 1704, 1770
EcoT22I	ATGCAT	1 cut(s)	1279
EgeI	GGCGCC	1 cut(s)	12
EheI	GGCGCC	1 cut(s)	12
ErhI	CCWWGG	3 cut(s)	1161, 1704, 1770
FaeI	CATG	5 cut(s)	550, 1165, 1579, 1774, 1960
FaqI	GGGAC	2 cut(s)	976, 2251
FatI	CATG	5 cut(s)	546, 1161, 1575, 1770, 1956
FbaI	TGATCA	2 cut(s)	106, 1671
FblI	GTMKAC	1 cut(s)	164
Fnu4HI	GCNGC	6 cut(s)	14, 57, 923, 1533, 1657, 1899
Fsp4HI	GCNGC	6 cut(s)	14, 57, 923, 1533, 1657, 1899
FspBI	CTAG	5 cut(s)	344, 582, 1020, 1841, 2093
GlaI	GCGC	3 cut(s)	12, 593, 1486
GluI	GCNGC	6 cut(s)	14, 57, 923, 1533, 1657, 1899
GsaI	CCCAGC	2 cut(s)	1073, 2051
GsuI	CTGGAG	3 cut(s)	491, 1243, 1838
HaeII	RGCGCY	2 cut(s)	14, 595
HaeIII	GGCC	1 cut(s)	216
HapII	CCGG	4 cut(s)	34, 235, 1795, 1818
HgaI	GACGC	1 cut(s)	347
HhaI	GCGC	3 cut(s)	13, 594, 1487
Hin1I	GRCGYC	2 cut(s)	11, 358
Hin1II	CATG	5 cut(s)	550, 1165, 1579, 1774, 1960
Hin6I	GCGC	3 cut(s)	11, 592, 1485
HinP1I	GCGC	3 cut(s)	11, 592, 1485
HincII	GTYRAC	2 cut(s)	165, 1647
HindII	GTYRAC	2 cut(s)	165, 1647
HindIII	AAGCTT	2 cut(s)	1826, 2037
HpaII	CCGG	4 cut(s)	34, 235, 1795, 1818
HphI	GGTGA	2 cut(s)	23, 221
Hpy166II	GTNNAC	5 cut(s)	165, 370, 743, 1268, 1647
Hpy188III	TCNNGA	7 cut(s)	265, 287, 683, 1101, 1258, 1576, 2164
Hpy8I	GTNNAC	5 cut(s)	165, 370, 743, 1268, 1647
Hpy99I	CGWCG	4 cut(s)	22, 169, 363, 1113
HpyAV	CCTTC	5 cut(s)	358, 418, 1297, 1612, 1736
HpyCH4III	ACNGT	4 cut(s)	78, 227, 668, 2242
HpyCH4IV	ACGT	1 cut(s)	167
HpyF10VI	GCNNNNNNNGC	5 cut(s)	455, 600, 848, 1325, 1538
HpyF3I	CTNAG	7 cut(s)	68, 501, 542, 789, 916, 2075, 2152
HpySE526I	ACGT	1 cut(s)	167
Hsp92I	GRCGYC	2 cut(s)	11, 358
Hsp92II	CATG	5 cut(s)	550, 1165, 1579, 1774, 1960
HspAI	GCGC	3 cut(s)	11, 592, 1485
KasI	GGCGCC	1 cut(s)	10
Ksp22I	TGATCA	2 cut(s)	106, 1671
LmnI	GCTCC	4 cut(s)	1046, 1224, 1316, 1573
Lsp1109I	GCAGC	3 cut(s)	909, 1519, 1885
LweI	GCATC	6 cut(s)	37, 330, 703, 1423, 1528, 1615
MaeI	CTAG	5 cut(s)	344, 582, 1020, 1841, 2093
MaeII	ACGT	1 cut(s)	167
MaeIII	GTNAC	6 cut(s)	227, 1189, 1241, 1708, 2059, 2161
MbiI	CCGCTC	1 cut(s)	72
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	2 cut(s)	1097, 1720
Mly113I	GGCGCC	1 cut(s)	11
MlyI	GAGTC	4 cut(s)	210, 1415, 1442, 2276
MmeI	TCCRAC	5 cut(s)	72, 307, 341, 1182, 2008
Mph1103I	ATGCAT	1 cut(s)	1279
MseI	TTAA	4 cut(s)	303, 753, 866, 1731
MslI	CAYNNNNRTG	5 cut(s)	730, 948, 1196, 1282, 1333
MspA1I	CMGCKG	2 cut(s)	1073, 1532
MspI	CCGG	4 cut(s)	34, 235, 1795, 1818
MspR9I	CCNGG	4 cut(s)	297, 976, 1795, 1856
MunI	CAATTG	1 cut(s)	717
Mva1269I	GAATGC	2 cut(s)	994, 1396
MvaI	CCWGG	3 cut(s)	297, 976, 1856
MvnI	CGCG	1 cut(s)	1035
MwoI	GCNNNNNNNGC	5 cut(s)	455, 600, 848, 1325, 1538
NarI	GGCGCC	1 cut(s)	11
NciI	CCSGG	1 cut(s)	1795
NcoI	CCATGG	2 cut(s)	1161, 1770
NlaIII	CATG	5 cut(s)	550, 1165, 1579, 1774, 1960
NlaIV	GGNNCC	3 cut(s)	12, 1569, 1860
NmuCI	GTSAC	6 cut(s)	227, 1189, 1241, 1708, 2059, 2161
NsiI	ATGCAT	1 cut(s)	1279
NspI	RCATGY	1 cut(s)	1960
NspV	TTCGAA	1 cut(s)	1388
PaeR7I	CTCGAG	1 cut(s)	2264
PagI	TCATGA	1 cut(s)	1575
PciI	ACATGT	1 cut(s)	1956
PcsI	WCGNNNNNNNCGW	1 cut(s)	2251
PctI	GAATGC	2 cut(s)	994, 1396
PfeI	GAWTC	8 cut(s)	416, 551, 929, 1340, 1556, 1922, 1974, 1984
PflMI	CCANNNNNTGG	1 cut(s)	1100
PkrI	GCNGC	6 cut(s)	15, 58, 924, 1534, 1658, 1900
PleI	GAGTC	4 cut(s)	209, 1414, 1442, 2275
PluTI	GGCGCC	1 cut(s)	14
PpsI	GAGTC	4 cut(s)	209, 1414, 1442, 2275
PscI	ACATGT	1 cut(s)	1956
PshBI	ATTAAT	1 cut(s)	753
PsiI	TTATAA	1 cut(s)	620
Psp6I	CCWGG	3 cut(s)	295, 974, 1854
PspFI	CCCAGC	2 cut(s)	1069, 2047
PspGI	CCWGG	3 cut(s)	295, 974, 1854
PspN4I	GGNNCC	3 cut(s)	12, 1569, 1860
PspPI	GGNCC	3 cut(s)	329, 635, 680
PspXI	VCTCGAGB	1 cut(s)	2264
PstI	CTGCAG	2 cut(s)	1219, 1537
PstNI	CAGNNNCTG	1 cut(s)	848
PsuI	RGATCY	2 cut(s)	1097, 1720
PvuII	CAGCTG	2 cut(s)	1073, 1532
RsaI	GTAC	8 cut(s)	224, 272, 371, 744, 1269, 1839, 1887, 2228
RsaNI	GTAC	8 cut(s)	223, 271, 370, 743, 1268, 1838, 1886, 2227
RseI	CAYNNNNRTG	5 cut(s)	730, 948, 1196, 1282, 1333
SalI	GTCGAC	1 cut(s)	163
SaqAI	TTAA	4 cut(s)	303, 753, 866, 1731
SatI	GCNGC	6 cut(s)	14, 57, 923, 1533, 1657, 1899
Sau96I	GGNCC	3 cut(s)	329, 635, 680
ScaI	AGTACT	1 cut(s)	224
SchI	GAGTC	4 cut(s)	210, 1415, 1442, 2276
ScrFI	CCNGG	4 cut(s)	297, 976, 1795, 1856
SfaNI	GCATC	6 cut(s)	37, 330, 703, 1423, 1528, 1615
SfcI	CTRYAG	4 cut(s)	1215, 1443, 1533, 1876
SfoI	GGCGCC	1 cut(s)	12
Sfr274I	CTCGAG	1 cut(s)	2264
SfuI	TTCGAA	1 cut(s)	1388
SinI	GGWCC	3 cut(s)	329, 635, 680
SlaI	CTCGAG	1 cut(s)	2264
SmiMI	CAYNNNNRTG	5 cut(s)	730, 948, 1196, 1282, 1333
SmlI	CTYRAG	2 cut(s)	872, 2264
SmoI	CTYRAG	2 cut(s)	872, 2264
SpeI	ACTAGT	1 cut(s)	1840
SspDI	GGCGCC	1 cut(s)	10
SspMI	CTAG	5 cut(s)	344, 582, 1020, 1841, 2093
StyD4I	CCNGG	4 cut(s)	295, 974, 1793, 1854
StyI	CCWWGG	3 cut(s)	1161, 1704, 1770
TaaI	ACNGT	4 cut(s)	78, 227, 668, 2242
TaiI	ACGT	1 cut(s)	170
TatI	WGTACW	4 cut(s)	222, 270, 369, 2226
TauI	GCSGC	3 cut(s)	16, 59, 1659
TfiI	GAWTC	8 cut(s)	416, 551, 929, 1340, 1556, 1922, 1974, 1984
Tru1I	TTAA	4 cut(s)	303, 753, 866, 1731
Tru9I	TTAA	4 cut(s)	303, 753, 866, 1731
TscAI	CASTG	3 cut(s)	342, 737, 1250
TseFI	GTSAC	6 cut(s)	227, 1189, 1241, 1708, 2059, 2161
TseI	GCWGC	3 cut(s)	922, 1532, 1898
Tsp45I	GTSAC	6 cut(s)	227, 1189, 1241, 1708, 2059, 2161
TspRI	CASTG	3 cut(s)	342, 737, 1250
Van91I	CCANNNNNTGG	1 cut(s)	1100
VpaK11BI	GGWCC	3 cut(s)	329, 635, 680
VspI	ATTAAT	1 cut(s)	753
XapI	RAATTY	3 cut(s)	1147, 1153, 1937
XceI	RCATGY	1 cut(s)	1960
XhoI	CTCGAG	1 cut(s)	2264
XmiI	GTMKAC	1 cut(s)	164
XspI	CTAG	5 cut(s)	344, 582, 1020, 1841, 2093
ZrmI	AGTACT	1 cut(s)	224
Zsp2I	ATGCAT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.