Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002347

Physical Location & Seq

Genomic Coordinates Reverse (-)

26854571 .. 26862425

Gene Structure 7855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0279100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCCACTGAATCCGGAGATCCTTACATCGGCAGCACCATAAGCCTAATCTCCAAGTACGAAATCCGTTACGAAGGGGTTCTCTACTTCCTCAGCGTCCAAGACTCCACCATTGGCCTCAGAAATGTTAAGTCATATGGAACAGAGGGGCGTAAGAAGGATGGGCCACAAGTTCCTCCAATTGATAAGGTGTTTGAGTACATTCTATTTAGAGGAAGCGACATTAAGGATTTGCAAGTTAAGTCTCCCGCACCTGCACAAAGAGAAGAACAGATTCACAATGATGATCCTGCCATTATACAGTCACACTATAGTGGGGTACCTGCAAGTTCTCCACCATCAGCACAGGTTGGTGGTACAAGTTTGTCTGGAATAACTCAGTGGCAGGATACCCCTGCTTTGAGTACTAAAAGCAATACTGGTGTGTTGCCTTTATATCATTCTACAACTGAAGTTGGTCCATTGGGGCATGCTTTTTCTAGTCAAATCGCTACTCCTCCAGCACTTTCTTTGCCGATGTATTGGCAAGGATACAATGGGGCTTCACTGAATATGTCTCAACAGCCACATCACCATATGCAATCCCAGTCTGCAATCTCACACCAGAATAAGGCTCCTGAAAGTCAGGCATCTATAACTATTGGCTTGGCAGATACATCAGCTCATGTATCTTTACCATCTCATTCCGCACCTGTGAATGCCAGTCAACTAAATATGCCTTCTTTACCTTCGCCTGGCCAAGACTGGAATATGAGGGAAACACAACATTTTAGTAAAGCCCTTTCTGATCCAGTACCAGTTCTTCCTGTGCAGTCCATGCCATACCCTGCATCATCGTCTGTGGTTTCTGATGCAGGTCCGTTGCTAACACCACCCCCATCTTTGTTAACTCCTGACCAATTGGTACCATCTAGATCACACATACTATCTCCCTTGCAAAAACTCTACCTTGATCAGAAGAATATGGGTGCTATACCAACACCAACTAGTTCTTCTTCCTTGATTCCTCCTCTAACTCAAGCACCATTGTTACCGTTGCCTACACCACAGTCTCAGTACTCGACTACTAAGTTCAATGAGGAGTTTGATTTTCTAGCCATGAATGAGAAGTTTAAGAAGGATGAAGTATGGGGCTACCTTGGAAAGGAAAAACAAAGGGATGAAACAGAGAGGGTGGATGGCAGTGGATCTGGTCAAAGCTTGGATGACAAAGAAGGCACAAAGCCTGCATATAACAAGGATGAGTTCTTTGACACAATTTCATGTAATTCTCTTAACCGTGGAGCAAGAAATGGACATAGGTTTTCTGAGAGAATGAGGACGGATAGTGAGACATTTGGCAATTTCCAGCAGAGATATAATCTTGGTTATGGCGGCGACGGTCCTGGCCGTGGTGGTAATTACCGGGGCCCATATCAGTCGGGAAGGGGTTATGGTTACGGTGGTAGGGGCCGTGGTGGTAACATGCCCACGTGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

493

Amino Acids

53.68

Weight (kDa)

6.23

Isoelectric Point (pI)

52.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LSM14	PF12701	8 - 82	1.4e-29	Scd6-like Sm domain
SM-ATX	PF14438	9 - 81	6.5e-08	Ataxin 2 SM domain
FDF	PF09532	357 - 449	3.1e-17	FDF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10570 AT5G65640 AT5G65640
fragaria_vesca	FvH4_1g18930 FvH4_1g18930 FvH4_1g18930 FvH4_5g33810 FvH4_5g33810 FvH4_5g33810
malus_domestica	MD01G1045500.v1.1 MD08G1207700.v1.1 MD15G1306400.v1.1 MD15G1392100.v1.1
prunus_persica	Prupe.1G540400_v2.0.a1 Prupe.6G210200_v2.0.a1
pyrus_communis	pycom01g07160 pycom08g17980 pycom15g27080 pycom15g35280
rosa_chinensis	RchiOBHm_Chr2g0109941 RchiOBHm_Chr7g0233161
rosa_laevigata	RLG00000001291 RLG00000017771
rosa_multiflora	Rmu_sc0002061.1_g000003 Rmu_sc0005173.1_g000020
rosa_roxburghii	Rroxscaffold_2G00133860 Rroxscaffold_3G00227590
rosa_rugosa	Rorug02G0164000 Rorug02G0164100 Rorug07G0279100 Rorug07G0279100 Rorug07G0279200
rosa_samantha	Rh2AG216000 Rh2BG226000 Rh2CG218200 Rh2DG221500 Rh7AG435000 Rh7BG407400 Rh7CG454000 Rh7DG422700
rosa_wichuraiana	Rw2G016680 Rw7G035780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	262
Acc36I	ACCTGC	3 cut(s)	262, 331, 845
Acc65I	GGTACC	2 cut(s)	319, 904
AccB1I	GGYRCC	2 cut(s)	319, 904
AccB7I	CCANNNNNTGG	1 cut(s)	1476
AccIII	TCCGGA	1 cut(s)	14
AciI	CCGC	3 cut(s)	249, 687, 1374
AclWI	GGATC	4 cut(s)	14, 281, 782, 1195
AcoI	YGGCCR	3 cut(s)	3, 736, 1387
AcuI	CTGAAG	1 cut(s)	471
AcvI	CACGTG	1 cut(s)	1473
AdeI	CACNNNGTG	1 cut(s)	1476
AfaI	GTAC	8 cut(s)	59, 200, 321, 358, 406, 795, 906, 1058
AfiI	CCNNNNNNNGG	6 cut(s)	29, 610, 734, 1144, 1391, 1476
AgsI	TTSAA	1 cut(s)	1075
AhlI	ACTAGT	1 cut(s)	986
AjnI	CCWGG	2 cut(s)	733, 1384
AjuI	GAANNNNNNNTTGG	2 cut(s)	976, 1008
AleI	CACNNNNGTG	1 cut(s)	312
AluBI	AGCT	2 cut(s)	662, 1200
AluI	AGCT	2 cut(s)	662, 1200
Alw26I	GTCTC	4 cut(s)	249, 561, 1056, 1325
AlwI	GGATC	4 cut(s)	14, 281, 782, 1195
Aor13HI	TCCGGA	1 cut(s)	14
AoxI	GGCC	7 cut(s)	3, 115, 164, 736, 1387, 1408, 1450
ApaI	GGGCCC	1 cut(s)	1412
ApeKI	GCWGC	1 cut(s)	33
Asp700I	GAANNNNTTC	2 cut(s)	78, 273
Asp718I	GGTACC	2 cut(s)	319, 904
AspS9I	GGNCC	7 cut(s)	164, 458, 857, 1382, 1408, 1409, 1450
AsuC2I	CCSGG	1 cut(s)	1406
AsuHPI	GGTGA	1 cut(s)	563
AvaII	GGWCC	3 cut(s)	458, 857, 1382
BaeGI	GKGCMC	1 cut(s)	1412
BalI	TGGCCA	2 cut(s)	5, 738
BanI	GGYRCC	2 cut(s)	319, 904
BanII	GRGCYC	1 cut(s)	1412
BarI	GAAGNNNNNNTAC	2 cut(s)	786, 818
BbrPI	CACGTG	1 cut(s)	1473
BbvCI	CCTCAGC	1 cut(s)	92
BbvI	GCAGC	1 cut(s)	45
BccI	CCATC	6 cut(s)	155, 346, 685, 886, 916, 1172
BceAI	ACGGC	2 cut(s)	1374, 1437
BciT130I	CCWGG	2 cut(s)	735, 1386
BciVI	GTATCC	2 cut(s)	382, 524
BclI	TGATCA	1 cut(s)	952
BcnI	CCSGG	1 cut(s)	1406
BcoDI	GTCTC	4 cut(s)	249, 561, 1056, 1325
BcuI	ACTAGT	1 cut(s)	986
BfaI	CTAG	4 cut(s)	480, 912, 987, 1094
BfmI	CTRYAG	1 cut(s)	310
BfuAI	ACCTGC	3 cut(s)	262, 331, 845
BfuI	GTATCC	2 cut(s)	382, 524
BisI	GCNGC	2 cut(s)	34, 1375
BlsI	GCNGC	2 cut(s)	35, 1376
BmcAI	AGTACT	2 cut(s)	406, 1058
Bme1390I	CCNGG	3 cut(s)	735, 1386, 1406
Bme18I	GGWCC	3 cut(s)	458, 857, 1382
BmgT120I	GGNCC	7 cut(s)	164, 458, 857, 1382, 1408, 1409, 1450
BmiI	GGNNCC	6 cut(s)	321, 615, 906, 1409, 1410, 1451
BmrFI	CCNGG	3 cut(s)	735, 1386, 1406
BmrI	ACTGGG	1 cut(s)	580
BmsI	GCATC	3 cut(s)	638, 839, 841
BmuI	ACTGGG	1 cut(s)	580
BpmI	CTGGAG	1 cut(s)	483
Bpu10I	CCTNAGC	1 cut(s)	92
BpuEI	CTTGAG	1 cut(s)	1002
BpuMI	CCSGG	1 cut(s)	1406
BsaAI	YACGTR	1 cut(s)	1473
BsaJI	CCNNGG	5 cut(s)	1138, 1279, 1390, 1405, 1453
BsaWI	WCCGGW	1 cut(s)	14
Bsc4I	CCNNNNNNNGG	6 cut(s)	29, 610, 734, 1144, 1391, 1476
Bse1I	ACTGG	6 cut(s)	424, 586, 702, 749, 791, 797
BseAI	TCCGGA	1 cut(s)	14
BseBI	CCWGG	2 cut(s)	735, 1386
BseDI	CCNNGG	5 cut(s)	1138, 1279, 1390, 1405, 1453
BseGI	GGATG	6 cut(s)	166, 1126, 1165, 1183, 1210, 1246
BseLI	CCNNNNNNNGG	6 cut(s)	29, 610, 734, 1144, 1391, 1476
BseMII	CTCAG	5 cut(s)	106, 133, 392, 1067, 1299
BseNI	ACTGG	6 cut(s)	424, 586, 702, 749, 791, 797
BseRI	GAGGAG	3 cut(s)	486, 999, 1094
BseSI	GKGCMC	1 cut(s)	1412
BseXI	GCAGC	1 cut(s)	45
BsgI	GTGCAG	2 cut(s)	240, 830
BshFI	GGCC	7 cut(s)	5, 117, 166, 738, 1389, 1410, 1452
BshNI	GGYRCC	2 cut(s)	319, 904
BsiSI	CCGG	2 cut(s)	15, 1405
BslI	CCNNNNNNNGG	6 cut(s)	29, 610, 734, 1144, 1391, 1476
BsmAI	GTCTC	4 cut(s)	249, 561, 1056, 1325
BsmI	GAATGC	1 cut(s)	703
BsnI	GGCC	7 cut(s)	5, 117, 166, 738, 1389, 1410, 1452
Bsp120I	GGGCCC	1 cut(s)	1408
Bsp1286I	GDGCHC	1 cut(s)	1412
Bsp13I	TCCGGA	1 cut(s)	14
Bsp143I	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
BspACI	CCGC	3 cut(s)	249, 687, 1374
BspANI	GGCC	7 cut(s)	5, 117, 166, 738, 1389, 1410, 1452
BspCNI	CTCAG	5 cut(s)	105, 132, 391, 1066, 1300
BspEI	TCCGGA	1 cut(s)	14
BspLI	GGNNCC	6 cut(s)	321, 615, 906, 1409, 1410, 1451
BspMI	ACCTGC	3 cut(s)	262, 331, 845
BspPI	GGATC	4 cut(s)	14, 281, 782, 1195
BspT107I	GGYRCC	2 cut(s)	319, 904
BsrI	ACTGG	6 cut(s)	424, 586, 702, 749, 791, 797
BssECI	CCNNGG	5 cut(s)	1138, 1279, 1390, 1405, 1453
BssMI	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
BssT1I	CCWWGG	1 cut(s)	1138
Bst2UI	CCWGG	2 cut(s)	735, 1386
Bst4CI	ACNGT	6 cut(s)	303, 1035, 1050, 1280, 1382, 1442
BstAPI	GCANNNNNTGC	1 cut(s)	817
BstBAI	YACGTR	1 cut(s)	1473
BstC8I	GCNNGC	2 cut(s)	471, 1227
BstDEI	CTNAG	6 cut(s)	92, 119, 378, 1053, 1068, 1308
BstDSI	CCRYGG	3 cut(s)	1279, 1390, 1453
BstENI	CCTNNNNNAGG	1 cut(s)	1142
BstF5I	GGATG	6 cut(s)	166, 1126, 1165, 1183, 1210, 1246
BstKTI	GATC	6 cut(s)	22, 289, 790, 917, 955, 1190
BstMAI	GTCTC	4 cut(s)	249, 561, 1056, 1325
BstMBI	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
BstMWI	GCNNNNNNNGC	2 cut(s)	42, 817
BstNI	CCWGG	2 cut(s)	735, 1386
BstNSI	RCATGY	2 cut(s)	473, 1468
BstSCI	CCNGG	3 cut(s)	733, 1384, 1404
BstSFI	CTRYAG	1 cut(s)	310
BstSLI	GKGCMC	1 cut(s)	1412
BstV1I	GCAGC	1 cut(s)	45
BstX2I	RGATCY	2 cut(s)	19, 1187
BstYI	RGATCY	2 cut(s)	19, 1187
BsuI	GTATCC	2 cut(s)	382, 524
BsuRI	GGCC	7 cut(s)	5, 117, 166, 738, 1389, 1410, 1452
BtgI	CCRYGG	3 cut(s)	1279, 1390, 1453
BtsCI	GGATG	6 cut(s)	166, 1126, 1165, 1183, 1210, 1246
BtsI	GCAGTG	1 cut(s)	1189
BtsIMutI	CAGTG	4 cut(s)	6, 386, 545, 1189
BveI	ACCTGC	3 cut(s)	262, 331, 845
Cac8I	GCNNGC	2 cut(s)	471, 1227
Cfr13I	GGNCC	7 cut(s)	164, 458, 857, 1382, 1408, 1409, 1450
CseI	GACGC	1 cut(s)	85
Csp6I	GTAC	8 cut(s)	58, 199, 320, 357, 405, 794, 905, 1057
CviAII	CATG	6 cut(s)	470, 665, 817, 1099, 1263, 1465
CviQI	GTAC	8 cut(s)	58, 199, 320, 357, 405, 794, 905, 1057
DdeI	CTNAG	6 cut(s)	92, 119, 378, 1053, 1068, 1308
DpnI	GATC	6 cut(s)	21, 288, 789, 916, 954, 1189
DpnII	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
DraIII	CACNNNGTG	1 cut(s)	1476
EaeI	YGGCCR	3 cut(s)	3, 736, 1387
Eco130I	CCWWGG	1 cut(s)	1138
Eco24I	GRGCYC	1 cut(s)	1412
Eco47I	GGWCC	3 cut(s)	458, 857, 1382
Eco57I	CTGAAG	1 cut(s)	471
Eco72I	CACGTG	1 cut(s)	1473
EcoNI	CCTNNNNNAGG	1 cut(s)	1142
EcoO109I	RGGNCCY	1 cut(s)	1408
EcoRII	CCWGG	2 cut(s)	733, 1384
EcoT14I	CCWWGG	1 cut(s)	1138
EcoT38I	GRGCYC	1 cut(s)	1412
ErhI	CCWWGG	1 cut(s)	1138
FaeI	CATG	6 cut(s)	473, 668, 820, 1102, 1266, 1468
FatI	CATG	6 cut(s)	469, 664, 816, 1098, 1262, 1464
FauI	CCCGC	1 cut(s)	256
FauNDI	CATATG	2 cut(s)	136, 576
FbaI	TGATCA	1 cut(s)	952
Fnu4HI	GCNGC	2 cut(s)	34, 1375
FokI	GGATG	6 cut(s)	173, 1133, 1172, 1190, 1217, 1253
FriOI	GRGCYC	1 cut(s)	1412
Fsp4HI	GCNGC	2 cut(s)	34, 1375
FspBI	CTAG	4 cut(s)	480, 912, 987, 1094
GluI	GCNGC	2 cut(s)	34, 1375
GsuI	CTGGAG	1 cut(s)	483
HaeIII	GGCC	7 cut(s)	5, 117, 166, 738, 1389, 1410, 1452
HapII	CCGG	2 cut(s)	15, 1405
HgaI	GACGC	1 cut(s)	85
Hin1II	CATG	6 cut(s)	473, 668, 820, 1102, 1266, 1468
HincII	GTYRAC	2 cut(s)	707, 888
HindII	GTYRAC	2 cut(s)	707, 888
HindIII	AAGCTT	1 cut(s)	1198
HinfI	GANTC	4 cut(s)	11, 104, 274, 1003
HpaI	GTTAAC	1 cut(s)	888
HpaII	CCGG	2 cut(s)	15, 1405
HphI	GGTGA	1 cut(s)	563
Hpy166II	GTNNAC	2 cut(s)	707, 888
Hpy188I	TCNGA	5 cut(s)	122, 787, 850, 957, 1309
Hpy188III	TCNNGA	6 cut(s)	15, 369, 617, 893, 912, 1422
Hpy8I	GTNNAC	2 cut(s)	707, 888
Hpy99I	CGWCG	1 cut(s)	1382
HpyAV	CCTTC	7 cut(s)	68, 151, 729, 738, 1111, 1208, 1419
HpyCH4III	ACNGT	6 cut(s)	303, 1035, 1050, 1280, 1382, 1442
HpyCH4IV	ACGT	1 cut(s)	1472
HpyF10VI	GCNNNNNNNGC	2 cut(s)	42, 817
HpyF3I	CTNAG	6 cut(s)	92, 119, 378, 1053, 1068, 1308
HpySE526I	ACGT	1 cut(s)	1472
Hsp92II	CATG	6 cut(s)	473, 668, 820, 1102, 1266, 1468
Kpn2I	TCCGGA	1 cut(s)	14
KpnI	GGTACC	2 cut(s)	323, 908
Ksp22I	TGATCA	1 cut(s)	952
KspAI	GTTAAC	1 cut(s)	888
Kzo9I	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
LmnI	GCTCC	2 cut(s)	619, 1283
Lsp1109I	GCAGC	1 cut(s)	45
LweI	GCATC	3 cut(s)	638, 839, 841
MaeI	CTAG	4 cut(s)	480, 912, 987, 1094
MaeII	ACGT	1 cut(s)	1472
MaeIII	GTNAC	5 cut(s)	68, 303, 1029, 1436, 1460
MalI	GATC	6 cut(s)	21, 288, 789, 916, 954, 1189
MboI	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
MboII	GAAGA	5 cut(s)	278, 794, 970, 984, 987
MfeI	CAATTG	2 cut(s)	180, 899
MflI	RGATCY	2 cut(s)	19, 1187
MhlI	GDGCHC	1 cut(s)	1412
MlsI	TGGCCA	2 cut(s)	5, 738
MluCI	AATT	6 cut(s)	180, 899, 1257, 1267, 1342, 1399
MluNI	TGGCCA	2 cut(s)	5, 738
MlyI	GAGTC	1 cut(s)	98
Mox20I	TGGCCA	2 cut(s)	5, 738
MroI	TCCGGA	1 cut(s)	14
MroXI	GAANNNNTTC	2 cut(s)	78, 273
MscI	TGGCCA	2 cut(s)	5, 738
MseI	TTAA	6 cut(s)	129, 225, 240, 887, 1113, 1275
MslI	CAYNNNNRTG	2 cut(s)	282, 312
Msp20I	TGGCCA	2 cut(s)	5, 738
MspI	CCGG	2 cut(s)	15, 1405
MspR9I	CCNGG	3 cut(s)	735, 1386, 1406
MunI	CAATTG	2 cut(s)	180, 899
Mva1269I	GAATGC	1 cut(s)	703
MvaI	CCWGG	2 cut(s)	735, 1386
MwoI	GCNNNNNNNGC	2 cut(s)	42, 817
NciI	CCSGG	1 cut(s)	1406
NdeI	CATATG	2 cut(s)	136, 576
NdeII	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
NlaIII	CATG	6 cut(s)	473, 668, 820, 1102, 1266, 1468
NlaIV	GGNNCC	6 cut(s)	321, 615, 906, 1409, 1410, 1451
NmuCI	GTSAC	1 cut(s)	303
NspI	RCATGY	2 cut(s)	473, 1468
OliI	CACNNNNGTG	1 cut(s)	312
PaeI	GCATGC	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	262
PctI	GAATGC	1 cut(s)	703
PdmI	GAANNNNTTC	2 cut(s)	78, 273
PfeI	GAWTC	3 cut(s)	11, 274, 1003
PflMI	CCANNNNNTGG	1 cut(s)	1476
PkrI	GCNGC	2 cut(s)	35, 1376
PleI	GAGTC	1 cut(s)	98
PmaCI	CACGTG	1 cut(s)	1473
PmlI	CACGTG	1 cut(s)	1473
PpsI	GAGTC	1 cut(s)	98
Ppu21I	YACGTR	1 cut(s)	1473
Psp6I	CCWGG	2 cut(s)	733, 1384
PspCI	CACGTG	1 cut(s)	1473
PspGI	CCWGG	2 cut(s)	733, 1384
PspN4I	GGNNCC	6 cut(s)	321, 615, 906, 1409, 1410, 1451
PspOMI	GGGCCC	1 cut(s)	1408
PspPI	GGNCC	7 cut(s)	164, 458, 857, 1382, 1408, 1409, 1450
PsuI	RGATCY	2 cut(s)	19, 1187
RsaI	GTAC	8 cut(s)	59, 200, 321, 358, 406, 795, 906, 1058
RsaNI	GTAC	8 cut(s)	58, 199, 320, 357, 405, 794, 905, 1057
RseI	CAYNNNNRTG	2 cut(s)	282, 312
SaqAI	TTAA	6 cut(s)	129, 225, 240, 887, 1113, 1275
SatI	GCNGC	2 cut(s)	34, 1375
Sau3AI	GATC	6 cut(s)	19, 286, 787, 914, 952, 1187
Sau96I	GGNCC	7 cut(s)	164, 458, 857, 1382, 1408, 1409, 1450
ScaI	AGTACT	2 cut(s)	406, 1058
SchI	GAGTC	1 cut(s)	98
ScrFI	CCNGG	3 cut(s)	735, 1386, 1406
SduI	GDGCHC	1 cut(s)	1412
SfaNI	GCATC	3 cut(s)	638, 839, 841
SfcI	CTRYAG	1 cut(s)	310
SinI	GGWCC	3 cut(s)	458, 857, 1382
SmiMI	CAYNNNNRTG	2 cut(s)	282, 312
SmlI	CTYRAG	1 cut(s)	1017
SmoI	CTYRAG	1 cut(s)	1017
SpeI	ACTAGT	1 cut(s)	986
SphI	GCATGC	1 cut(s)	473
Sse9I	AATT	6 cut(s)	180, 899, 1257, 1267, 1342, 1399
SsiI	CCGC	3 cut(s)	249, 687, 1374
SspMI	CTAG	4 cut(s)	480, 912, 987, 1094
StyD4I	CCNGG	3 cut(s)	733, 1384, 1404
StyI	CCWWGG	1 cut(s)	1138
TaaI	ACNGT	6 cut(s)	303, 1035, 1050, 1280, 1382, 1442
TaiI	ACGT	1 cut(s)	1475
TaqI	TCGA	1 cut(s)	1061
TasI	AATT	6 cut(s)	180, 899, 1257, 1267, 1342, 1399
TatI	WGTACW	3 cut(s)	198, 404, 1056
TauI	GCSGC	1 cut(s)	1377
TfiI	GAWTC	3 cut(s)	11, 274, 1003
Tru1I	TTAA	6 cut(s)	129, 225, 240, 887, 1113, 1275
Tru9I	TTAA	6 cut(s)	129, 225, 240, 887, 1113, 1275
TscAI	CASTG	4 cut(s)	13, 386, 552, 1189
TseFI	GTSAC	1 cut(s)	303
TseI	GCWGC	1 cut(s)	33
Tsp45I	GTSAC	1 cut(s)	303
TspDTI	ATGAA	4 cut(s)	1115, 1137, 1176, 1251
TspGWI	ACGGA	3 cut(s)	56, 849, 1337
TspRI	CASTG	4 cut(s)	13, 386, 552, 1189
Van91I	CCANNNNNTGG	1 cut(s)	1476
VpaK11BI	GGWCC	3 cut(s)	458, 857, 1382
XagI	CCTNNNNNAGG	1 cut(s)	1142
XbaI	TCTAGA	1 cut(s)	911
XceI	RCATGY	2 cut(s)	473, 1468
XmnI	GAANNNNTTC	2 cut(s)	78, 273
XspI	CTAG	4 cut(s)	480, 912, 987, 1094
ZrmI	AGTACT	2 cut(s)	406, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.