RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g38800 FvH4_3g38800 FvH4_3g38800 |
| malus_domestica | MD11G1072100.v1.1 |
| prunus_persica | Prupe.6G055800_v2.0.a1 |
| pyrus_communis | pycom04g08530 pycom11g06010 |
| rosa_chinensis | RchiOBHm_Chr5g0069981 |
| rosa_laevigata | RLG00000018167 RLG00000030052 RLG00000036111 |
| rosa_multiflora | Rmu_co8080984.1_g000001 Rmu_co8211894.1_g000002 Rmu_sc0005076.1_g000001 Rmu_sc0021441.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00011070 |
| rosa_rugosa | Rorug05G0401900 Rorug05G0401900 |
| rosa_samantha | Rh1AG439800 Rh1BG194500 Rh1DG222700 Rh4BG162700 Rh5AG458400 Rh5BG477100 Rh5CG176700 Rh5CG500800 Rh5DG489100 Rh7DG241300 |
| rosa_wichuraiana | Rw5G014670 Rw5G042790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 116 |
| AciI | CCGC | 2 cut(s) | 114, 139 |
| AgsI | TTSAA | 1 cut(s) | 187 |
| AluBI | AGCT | 2 cut(s) | 179, 209 |
| AluI | AGCT | 2 cut(s) | 179, 209 |
| Alw26I | GTCTC | 2 cut(s) | 91, 159 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 15, 47, 63, 95 |
| AspS9I | GGNCC | 2 cut(s) | 100, 124 |
| AvaII | GGWCC | 2 cut(s) | 100, 124 |
| BceAI | ACGGC | 2 cut(s) | 68, 101 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 10, 44, 130, 164 |
| BcoDI | GTCTC | 2 cut(s) | 91, 159 |
| Bme18I | GGWCC | 2 cut(s) | 100, 124 |
| BmgT120I | GGNCC | 2 cut(s) | 100, 124 |
| BpmI | CTGGAG | 1 cut(s) | 145 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 32, 62 |
| BseGI | GGATG | 1 cut(s) | 36 |
| BseRI | GAGGAG | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 90 |
| BsmAI | GTCTC | 2 cut(s) | 91, 159 |
| BsmBI | CGTCTC | 1 cut(s) | 91 |
| Bsp143I | GATC | 2 cut(s) | 133, 154 |
| BspACI | CCGC | 2 cut(s) | 114, 139 |
| BssMI | GATC | 2 cut(s) | 133, 154 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| BstC8I | GCNNGC | 2 cut(s) | 95, 177 |
| BstF5I | GGATG | 1 cut(s) | 36 |
| BstKTI | GATC | 2 cut(s) | 136, 157 |
| BstMAI | GTCTC | 2 cut(s) | 91, 159 |
| BstMBI | GATC | 2 cut(s) | 133, 154 |
| BtsCI | GGATG | 1 cut(s) | 36 |
| BtsI | GCAGTG | 1 cut(s) | 40 |
| BtsIMutI | CAGTG | 1 cut(s) | 40 |
| Cac8I | GCNNGC | 2 cut(s) | 95, 177 |
| Cfr13I | GGNCC | 2 cut(s) | 100, 124 |
| CviAII | CATG | 1 cut(s) | 169 |
| CviJI | RGCY | 4 cut(s) | 93, 97, 179, 209 |
| CviKI_1 | RGCY | 4 cut(s) | 93, 97, 179, 209 |
| DpnI | GATC | 2 cut(s) | 135, 156 |
| DpnII | GATC | 2 cut(s) | 133, 154 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 116 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 116 |
| EciI | GGCGGA | 1 cut(s) | 103 |
| Eco47I | GGWCC | 2 cut(s) | 100, 124 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| Esp3I | CGTCTC | 1 cut(s) | 91 |
| FaeI | CATG | 1 cut(s) | 172 |
| FaiI | YATR | 1 cut(s) | 170 |
| FatI | CATG | 1 cut(s) | 168 |
| FokI | GGATG | 1 cut(s) | 23 |
| GsuI | CTGGAG | 1 cut(s) | 145 |
| HapII | CCGG | 1 cut(s) | 90 |
| Hin1II | CATG | 1 cut(s) | 172 |
| HinfI | GANTC | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 90 |
| Hpy188III | TCNNGA | 1 cut(s) | 162 |
| Hpy99I | CGWCG | 2 cut(s) | 83, 122 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 1 cut(s) | 57 |
| Hsp92II | CATG | 1 cut(s) | 172 |
| Kzo9I | GATC | 2 cut(s) | 133, 154 |
| LpnPI | CCDG | 4 cut(s) | 79, 83, 103, 175 |
| MalI | GATC | 2 cut(s) | 135, 156 |
| MboI | GATC | 2 cut(s) | 133, 154 |
| MboII | GAAGA | 1 cut(s) | 19 |
| MluCI | AATT | 1 cut(s) | 182 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MnlI | CCTC | 8 cut(s) | 44, 56, 62, 74, 113, 115, 116, 137 |
| MspI | CCGG | 1 cut(s) | 90 |
| NdeII | GATC | 2 cut(s) | 133, 154 |
| NlaIII | CATG | 1 cut(s) | 172 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 75, 114 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| PpuMI | RGGWCCY | 1 cut(s) | 124 |
| Psp5II | RGGWCCY | 1 cut(s) | 124 |
| PspPI | GGNCC | 2 cut(s) | 100, 124 |
| PspPPI | RGGWCCY | 1 cut(s) | 124 |
| Sau3AI | GATC | 2 cut(s) | 133, 154 |
| Sau96I | GGNCC | 2 cut(s) | 100, 124 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SetI | ASST | 3 cut(s) | 129, 181, 211 |
| SgeI | CNNG | 9 cut(s) | 102, 106, 110, 119, 133, 143, 174, 181, 188 |
| SinI | GGWCC | 2 cut(s) | 100, 124 |
| Sse9I | AATT | 1 cut(s) | 182 |
| SsiI | CCGC | 2 cut(s) | 114, 139 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TaqI | TCGA | 2 cut(s) | 108, 120 |
| TasI | AATT | 1 cut(s) | 182 |
| TscAI | CASTG | 1 cut(s) | 47 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| TspRI | CASTG | 1 cut(s) | 47 |
| VpaK11BI | GGWCC | 2 cut(s) | 100, 124 |