RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g38800 FvH4_3g38800 FvH4_3g38800 |
| malus_domestica | MD11G1072100.v1.1 |
| prunus_persica | Prupe.6G055800_v2.0.a1 |
| pyrus_communis | pycom04g08530 pycom11g06010 |
| rosa_chinensis | RchiOBHm_Chr5g0069981 |
| rosa_laevigata | RLG00000018167 RLG00000030052 RLG00000036111 |
| rosa_multiflora | Rmu_co8080984.1_g000001 Rmu_co8211894.1_g000002 Rmu_sc0005076.1_g000001 Rmu_sc0021441.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00011070 |
| rosa_rugosa | Rorug05G0401900 Rorug05G0401900 |
| rosa_samantha | Rh1AG439800 Rh1BG194500 Rh1DG222700 Rh4BG162700 Rh5AG458400 Rh5BG477100 Rh5CG176700 Rh5CG500800 Rh5DG489100 Rh7DG241300 |
| rosa_wichuraiana | Rw5G014670 Rw5G042790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 182 |
| AgsI | TTSAA | 1 cut(s) | 19 |
| AluBI | AGCT | 2 cut(s) | 134, 148 |
| AluI | AGCT | 2 cut(s) | 134, 148 |
| Alw21I | GWGCWC | 1 cut(s) | 136 |
| AlwI | GGATC | 1 cut(s) | 182 |
| Ama87I | CYCGRG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| AsuNHI | GCTAGC | 1 cut(s) | 148 |
| AvaI | CYCGRG | 1 cut(s) | 129 |
| BanII | GRGCYC | 1 cut(s) | 136 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| Bbv12I | GWGCWC | 1 cut(s) | 136 |
| BceAI | ACGGC | 1 cut(s) | 83 |
| BfaI | CTAG | 1 cut(s) | 149 |
| BmeT110I | CYCGRG | 1 cut(s) | 129 |
| BmsI | GCATC | 1 cut(s) | 66 |
| BmtI | GCTAGC | 1 cut(s) | 152 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BseMII | CTCAG | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 1 cut(s) | 136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 129 |
| BsoBI | CYCGRG | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 136 |
| Bsp143I | GATC | 2 cut(s) | 105, 187 |
| BspCNI | CTCAG | 1 cut(s) | 184 |
| BspOI | GCTAGC | 1 cut(s) | 152 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BssMI | GATC | 2 cut(s) | 105, 187 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 60 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstKTI | GATC | 2 cut(s) | 108, 190 |
| BstMBI | GATC | 2 cut(s) | 105, 187 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| CviAII | CATG | 1 cut(s) | 118 |
| CviJI | RGCY | 5 cut(s) | 98, 128, 134, 148, 152 |
| CviKI_1 | RGCY | 5 cut(s) | 98, 128, 134, 148, 152 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 2 cut(s) | 107, 189 |
| DpnII | GATC | 2 cut(s) | 105, 187 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 60 |
| EarI | CTCTTC | 2 cut(s) | 30, 60 |
| Ecl136II | GAGCTC | 1 cut(s) | 134 |
| Eco24I | GRGCYC | 1 cut(s) | 136 |
| Eco53kI | GAGCTC | 1 cut(s) | 134 |
| Eco88I | CYCGRG | 1 cut(s) | 129 |
| EcoICRI | GAGCTC | 1 cut(s) | 134 |
| EcoT38I | GRGCYC | 1 cut(s) | 136 |
| FaeI | CATG | 1 cut(s) | 121 |
| FaiI | YATR | 1 cut(s) | 119 |
| FatI | CATG | 1 cut(s) | 117 |
| FriOI | GRGCYC | 1 cut(s) | 136 |
| FspBI | CTAG | 1 cut(s) | 149 |
| Hin1II | CATG | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 38 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 2 cut(s) | 60, 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 185, 191 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 1 cut(s) | 79 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92II | CATG | 1 cut(s) | 121 |
| Kzo9I | GATC | 2 cut(s) | 105, 187 |
| LpnPI | CCDG | 1 cut(s) | 103 |
| LweI | GCATC | 1 cut(s) | 66 |
| MaeI | CTAG | 1 cut(s) | 149 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MalI | GATC | 2 cut(s) | 107, 189 |
| MboI | GATC | 2 cut(s) | 105, 187 |
| MboII | GAAGA | 3 cut(s) | 47, 47, 97 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MhlI | GDGCHC | 1 cut(s) | 136 |
| MluCI | AATT | 3 cut(s) | 14, 111, 141 |
| NdeII | GATC | 2 cut(s) | 105, 187 |
| NheI | GCTAGC | 1 cut(s) | 148 |
| NlaIII | CATG | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| PaeR7I | CTCGAG | 1 cut(s) | 129 |
| Psp124BI | GAGCTC | 1 cut(s) | 136 |
| PspXI | VCTCGAGB | 1 cut(s) | 129 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| SacI | GAGCTC | 1 cut(s) | 136 |
| Sau3AI | GATC | 2 cut(s) | 105, 187 |
| SduI | GDGCHC | 1 cut(s) | 136 |
| SetI | ASST | 2 cut(s) | 136, 150 |
| SfaNI | GCATC | 1 cut(s) | 66 |
| Sfr274I | CTCGAG | 1 cut(s) | 129 |
| SlaI | CTCGAG | 1 cut(s) | 129 |
| SmlI | CTYRAG | 1 cut(s) | 129 |
| SmoI | CTYRAG | 1 cut(s) | 129 |
| Sse9I | AATT | 3 cut(s) | 14, 111, 141 |
| SspMI | CTAG | 1 cut(s) | 149 |
| SstI | GAGCTC | 1 cut(s) | 136 |
| TaqI | TCGA | 1 cut(s) | 130 |
| TasI | AATT | 3 cut(s) | 14, 111, 141 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XhoI | CTCGAG | 1 cut(s) | 129 |
| XspI | CTAG | 1 cut(s) | 149 |