Rh1CG245400

Protein CWC15 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
50625154 .. 50639573
14420 bp
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UTR
Exon/CDS
Intron
Rh1CG245400.1

Sequence Viewer

Length: 354 bp
ATGGTTTGTACAAACAGAAAGGATGGAAAGGACATCCAGGAAGAACTGCAGAAAAGGAACCTCCAGGAGGAGTTGGAAGACCATGAGAGGAGGCATTTTTCATCAAAGGATAAATATAGTTATGACAGAGATCGCAGCAGGAGAGGGAGCCAACTTTTGTTGGAAAGGATAAGAAGGGACACTGAAGACTGCGTTATACCACGTAATGTAGATGCTGATGATTCTGATATGGAAGTCAAAAGTGATGATGACAGACACCTTGAAGATAATCTGGATGATTGGCTTGCAAAGGGATTGGAGGATTACCTGGATGATGACTACTTAGTTTTTGACTGCCCAGTAATTTGTGAGTAA

Protein Analysis

117

Amino Acids

14.06

Weight (kDa)

4.51

Isoelectric Point (pI)

63.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 1 cut(s) 10
AfiI CCNNNNNNNGG 1 cut(s) 67
AgsI TTSAA 1 cut(s) 263
AjnI CCWGG 3 cut(s) 36, 63, 306
ApeKI GCWGC 1 cut(s) 135
BbsI GAAGAC 2 cut(s) 84, 192
BbvI GCAGC 1 cut(s) 147
BccI CCATC 1 cut(s) 17
BciT130I CCWGG 3 cut(s) 38, 65, 308
BfmI CTRYAG 1 cut(s) 47
BisI GCNGC 1 cut(s) 136
BlsI GCNGC 1 cut(s) 137
Bme1390I CCNGG 3 cut(s) 38, 65, 308
BmiI GGNNCC 2 cut(s) 59, 149
BmrFI CCNGG 3 cut(s) 38, 65, 308
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 1 cut(s) 202
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 2 cut(s) 84, 192
BpmI CTGGAG 1 cut(s) 47
BsaAI YACGTR 1 cut(s) 203
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse1I ACTGG 1 cut(s) 338
BseBI CCWGG 3 cut(s) 38, 65, 308
BseGI GGATG 4 cut(s) 28, 33, 280, 316
BseLI CCNNNNNNNGG 1 cut(s) 67
BseNI ACTGG 1 cut(s) 338
BseRI GAGGAG 2 cut(s) 83, 103
BseXI GCAGC 1 cut(s) 147
BslFI GGGAC 1 cut(s) 191
BslI CCNNNNNNNGG 1 cut(s) 67
BsmFI GGGAC 1 cut(s) 191
Bsp1407I TGTACA 1 cut(s) 8
Bsp143I GATC 1 cut(s) 130
BspLI GGNNCC 2 cut(s) 59, 149
BspMAI CTGCAG 1 cut(s) 51
BsrGI TGTACA 1 cut(s) 8
BsrI ACTGG 1 cut(s) 338
BssMI GATC 1 cut(s) 130
Bst2UI CCWGG 3 cut(s) 38, 65, 308
BstAUI TGTACA 1 cut(s) 8
BstBAI YACGTR 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 1 cut(s) 322
BstENI CCTNNNNNAGG 1 cut(s) 65
BstF5I GGATG 4 cut(s) 28, 33, 280, 316
BstKTI GATC 1 cut(s) 133
BstMBI GATC 1 cut(s) 130
BstNI CCWGG 3 cut(s) 38, 65, 308
BstSCI CCNGG 3 cut(s) 36, 63, 306
BstSFI CTRYAG 1 cut(s) 47
BstV1I GCAGC 1 cut(s) 147
BstV2I GAAGAC 2 cut(s) 84, 192
BtsCI GGATG 4 cut(s) 28, 33, 280, 316
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 1 cut(s) 285
Csp6I GTAC 1 cut(s) 9
CviAII CATG 1 cut(s) 83
CviJI RGCY 2 cut(s) 150, 283
CviKI_1 RGCY 2 cut(s) 150, 283
CviQI GTAC 1 cut(s) 9
DdeI CTNAG 1 cut(s) 322
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
Eco57I CTGAAG 1 cut(s) 204
EcoNI CCTNNNNNAGG 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 36, 63, 306
FaeI CATG 1 cut(s) 86
FaiI YATR 5 cut(s) 84, 117, 123, 197, 230
FaqI GGGAC 1 cut(s) 191
FatI CATG 1 cut(s) 82
Fnu4HI GCNGC 1 cut(s) 136
FokI GGATG 4 cut(s) 20, 35, 287, 323
Fsp4HI GCNGC 1 cut(s) 136
GluI GCNGC 1 cut(s) 136
GsuI CTGGAG 1 cut(s) 47
Hin1II CATG 1 cut(s) 86
HinfI GANTC 1 cut(s) 221
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 272
HpyAV CCTTC 1 cut(s) 168
HpyCH4IV ACGT 1 cut(s) 202
HpyCH4V TGCA 2 cut(s) 49, 287
HpyF3I CTNAG 1 cut(s) 322
HpySE526I ACGT 1 cut(s) 202
Hsp92II CATG 1 cut(s) 86
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 147
LpnPI CCDG 8 cut(s) 23, 50, 50, 77, 124, 257, 293, 320
Lsp1109I GCAGC 1 cut(s) 147
LweI GCATC 1 cut(s) 202
MaeII ACGT 1 cut(s) 202
MalI GATC 1 cut(s) 132
MboI GATC 1 cut(s) 130
MboII GAAGA 4 cut(s) 53, 89, 197, 275
MluCI AATT 1 cut(s) 342
MmeI TCCRAC 2 cut(s) 54, 141
MnlI CCTC 6 cut(s) 61, 71, 81, 84, 137, 292
MspR9I CCNGG 3 cut(s) 38, 65, 308
MvaI CCWGG 3 cut(s) 38, 65, 308
NdeII GATC 1 cut(s) 130
NlaIII CATG 1 cut(s) 86
NlaIV GGNNCC 2 cut(s) 59, 149
PfeI GAWTC 1 cut(s) 221
PfoI TCCNGGA 2 cut(s) 36, 63
PkrI GCNGC 1 cut(s) 137
Ppu21I YACGTR 1 cut(s) 203
Psp6I CCWGG 3 cut(s) 36, 63, 306
PspGI CCWGG 3 cut(s) 36, 63, 306
PspN4I GGNNCC 2 cut(s) 59, 149
PstI CTGCAG 1 cut(s) 51
RsaI GTAC 1 cut(s) 10
RsaNI GTAC 1 cut(s) 9
SatI GCNGC 1 cut(s) 136
Sau3AI GATC 1 cut(s) 130
ScrFI CCNGG 3 cut(s) 38, 65, 308
SetI ASST 4 cut(s) 63, 205, 261, 309
SfaNI GCATC 1 cut(s) 202
SfcI CTRYAG 1 cut(s) 47
Sse9I AATT 1 cut(s) 342
StyD4I CCNGG 3 cut(s) 36, 63, 306
TaiI ACGT 1 cut(s) 205
TasI AATT 1 cut(s) 342
TatI WGTACW 1 cut(s) 8
TfiI GAWTC 1 cut(s) 221
TscAI CASTG 1 cut(s) 187
TseI GCWGC 1 cut(s) 135
TspDTI ATGAA 1 cut(s) 90
TspRI CASTG 1 cut(s) 187
XagI CCTNNNNNAGG 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.