Belongs to the Casparian strip membrane proteins (CASP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25040 |
| fragaria_vesca | FvH4_5g09090 FvH4_6g54070 |
| malus_domestica | MD06G1133900.v1.1 MD09G1005700.v1.1 MD14G1150200.v1.1 MD17G1009800.v1.1 |
| prunus_persica | Prupe.3G311300_v2.0.a1 Prupe.5G144900_v2.0.a1 |
| pyrus_communis | pycom06g12510 pycom111g00410 pycom14g12480 pycom17g00440 |
| rosa_chinensis | RchiOBHm_Chr2g0176261 RchiOBHm_Chr7g0189121 |
| rosa_laevigata | RLG00000004632 RLG00000022395 |
| rosa_multiflora | Rmu_co7998998.1_g000002 Rmu_sc0000405.1_g000021 Rmu_sc0007859.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00076640 Rroxscaffold_3G00265770 |
| rosa_rugosa | Rorug02G0592400 Rorug06G0496100 |
| rosa_samantha | Rh2AG670800 Rh2BG682300 Rh2CG645100 Rh2DG695900 Rh7AG100700 Rh7BG103400 Rh7CG104600 Rh7DG102700 |
| rosa_wichuraiana | Rw2G055030 Rw7G008700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 76, 104, 166, 245 |
| AfaI | GTAC | 2 cut(s) | 335, 413 |
| AflII | CTTAAG | 1 cut(s) | 298 |
| AgsI | TTSAA | 1 cut(s) | 193 |
| AluBI | AGCT | 2 cut(s) | 383, 395 |
| AluI | AGCT | 2 cut(s) | 383, 395 |
| AoxI | GGCC | 1 cut(s) | 516 |
| ApeKI | GCWGC | 3 cut(s) | 242, 392, 395 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 335 |
| AsuHPI | GGTGA | 1 cut(s) | 373 |
| BaeGI | GKGCMC | 1 cut(s) | 471 |
| BbsI | GAAGAC | 2 cut(s) | 6, 277 |
| BbvI | GCAGC | 3 cut(s) | 229, 382, 404 |
| BccI | CCATC | 3 cut(s) | 88, 361, 500 |
| BceAI | ACGGC | 2 cut(s) | 89, 288 |
| BfrI | CTTAAG | 1 cut(s) | 298 |
| BisI | GCNGC | 3 cut(s) | 243, 393, 396 |
| BlsI | GCNGC | 3 cut(s) | 244, 394, 397 |
| BmcAI | AGTACT | 1 cut(s) | 335 |
| BmsI | GCATC | 1 cut(s) | 238 |
| BpiI | GAAGAC | 2 cut(s) | 6, 277 |
| BpuEI | CTTGAG | 2 cut(s) | 84, 311 |
| Bse1I | ACTGG | 1 cut(s) | 169 |
| BseGI | GGATG | 2 cut(s) | 253, 392 |
| BseMII | CTCAG | 2 cut(s) | 124, 282 |
| BseNI | ACTGG | 1 cut(s) | 169 |
| BseSI | GKGCMC | 1 cut(s) | 471 |
| BseXI | GCAGC | 3 cut(s) | 229, 382, 404 |
| BsgI | GTGCAG | 1 cut(s) | 411 |
| Bsh1285I | CGRYCG | 1 cut(s) | 159 |
| BshFI | GGCC | 1 cut(s) | 518 |
| BsiEI | CGRYCG | 1 cut(s) | 159 |
| BslFI | GGGAC | 2 cut(s) | 120, 325 |
| BsmFI | GGGAC | 2 cut(s) | 120, 325 |
| BsnI | GGCC | 1 cut(s) | 518 |
| Bsp1286I | GDGCHC | 1 cut(s) | 471 |
| BspACI | CCGC | 4 cut(s) | 76, 104, 166, 245 |
| BspANI | GGCC | 1 cut(s) | 518 |
| BspCNI | CTCAG | 2 cut(s) | 123, 281 |
| BspTI | CTTAAG | 1 cut(s) | 298 |
| BsrI | ACTGG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 4 cut(s) | 22, 157, 276, 361 |
| Bst6I | CTCTTC | 1 cut(s) | 350 |
| BstAFI | CTTAAG | 1 cut(s) | 298 |
| BstC8I | GCNNGC | 3 cut(s) | 450, 529, 533 |
| BstDEI | CTNAG | 3 cut(s) | 110, 118, 268 |
| BstF5I | GGATG | 2 cut(s) | 253, 392 |
| BstMCI | CGRYCG | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 248, 389, 401, 524 |
| BstNSI | RCATGY | 1 cut(s) | 452 |
| BstSLI | GKGCMC | 1 cut(s) | 471 |
| BstV1I | GCAGC | 3 cut(s) | 229, 382, 404 |
| BstV2I | GAAGAC | 2 cut(s) | 6, 277 |
| BsuRI | GGCC | 1 cut(s) | 518 |
| BtsCI | GGATG | 2 cut(s) | 253, 392 |
| BtsIMutI | CAGTG | 1 cut(s) | 272 |
| Cac8I | GCNNGC | 3 cut(s) | 450, 529, 533 |
| Csp6I | GTAC | 2 cut(s) | 334, 412 |
| CviAII | CATG | 4 cut(s) | 439, 449, 547, 557 |
| CviJI | RGCY | 8 cut(s) | 5, 26, 98, 303, 383, 395, 518, 554 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 26, 98, 303, 383, 395, 518, 554 |
| CviQI | GTAC | 2 cut(s) | 334, 412 |
| DdeI | CTNAG | 3 cut(s) | 110, 118, 268 |
| Eam1104I | CTCTTC | 1 cut(s) | 350 |
| EarI | CTCTTC | 1 cut(s) | 350 |
| EciI | GGCGGA | 1 cut(s) | 91 |
| FaeI | CATG | 4 cut(s) | 442, 452, 550, 560 |
| FaiI | YATR | 7 cut(s) | 426, 440, 450, 465, 511, 548, 558 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 320, 352, 323, 355 |
| FaqI | GGGAC | 2 cut(s) | 120, 325 |
| FatI | CATG | 4 cut(s) | 438, 448, 546, 556 |
| FauI | CCCGC | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 3 cut(s) | 243, 393, 396 |
| FokI | GGATG | 2 cut(s) | 260, 399 |
| Fsp4HI | GCNGC | 3 cut(s) | 243, 393, 396 |
| GluI | GCNGC | 3 cut(s) | 243, 393, 396 |
| HaeIII | GGCC | 1 cut(s) | 518 |
| Hin1II | CATG | 4 cut(s) | 442, 452, 550, 560 |
| HincII | GTYRAC | 1 cut(s) | 71 |
| HindII | GTYRAC | 1 cut(s) | 71 |
| HinfI | GANTC | 4 cut(s) | 11, 59, 108, 114 |
| HphI | GGTGA | 1 cut(s) | 373 |
| Hpy166II | GTNNAC | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 113, 188 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 328, 583 |
| Hpy8I | GTNNAC | 1 cut(s) | 71 |
| Hpy99I | CGWCG | 2 cut(s) | 22, 179 |
| HpyAV | CCTTC | 3 cut(s) | 139, 274, 529 |
| HpyCH4III | ACNGT | 4 cut(s) | 22, 157, 276, 361 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 5 cut(s) | 392, 404, 452, 480, 503 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 248, 389, 401, 524 |
| HpyF3I | CTNAG | 3 cut(s) | 110, 118, 268 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| Hsp92II | CATG | 4 cut(s) | 442, 452, 550, 560 |
| LpnPI | CCDG | 4 cut(s) | 182, 294, 369, 541 |
| Lsp1109I | GCAGC | 3 cut(s) | 229, 382, 404 |
| LweI | GCATC | 1 cut(s) | 238 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MaeIII | GTNAC | 1 cut(s) | 151 |
| MboII | GAAGA | 7 cut(s) | 6, 49, 175, 277, 331, 337, 443 |
| MhlI | GDGCHC | 1 cut(s) | 471 |
| MlyI | GAGTC | 2 cut(s) | 20, 102 |
| MnlI | CCTC | 3 cut(s) | 58, 333, 353 |
| MroXI | GAANNNNTTC | 1 cut(s) | 335 |
| MseI | TTAA | 2 cut(s) | 299, 374 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| MspCI | CTTAAG | 1 cut(s) | 298 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 248, 389, 401, 524 |
| NlaIII | CATG | 4 cut(s) | 442, 452, 550, 560 |
| NspI | RCATGY | 1 cut(s) | 452 |
| PaeI | GCATGC | 1 cut(s) | 452 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 14 |
| PdmI | GAANNNNTTC | 1 cut(s) | 335 |
| PfeI | GAWTC | 2 cut(s) | 59, 114 |
| PkrI | GCNGC | 3 cut(s) | 244, 394, 397 |
| PleI | GAGTC | 2 cut(s) | 19, 102 |
| PpsI | GAGTC | 2 cut(s) | 19, 102 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 2 cut(s) | 335, 413 |
| RsaNI | GTAC | 2 cut(s) | 334, 412 |
| SaqAI | TTAA | 2 cut(s) | 299, 374 |
| SatI | GCNGC | 3 cut(s) | 243, 393, 396 |
| ScaI | AGTACT | 1 cut(s) | 335 |
| SchI | GAGTC | 2 cut(s) | 20, 102 |
| SduI | GDGCHC | 1 cut(s) | 471 |
| SetI | ASST | 3 cut(s) | 233, 385, 397 |
| SfaNI | GCATC | 1 cut(s) | 238 |
| SmlI | CTYRAG | 3 cut(s) | 99, 298, 326 |
| SmoI | CTYRAG | 3 cut(s) | 99, 298, 326 |
| SphI | GCATGC | 1 cut(s) | 452 |
| SsiI | CCGC | 4 cut(s) | 76, 104, 166, 245 |
| TaaI | ACNGT | 4 cut(s) | 22, 157, 276, 361 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 2 cut(s) | 17, 62 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TfiI | GAWTC | 2 cut(s) | 59, 114 |
| Tru1I | TTAA | 2 cut(s) | 299, 374 |
| Tru9I | TTAA | 2 cut(s) | 299, 374 |
| TscAI | CASTG | 1 cut(s) | 279 |
| TseI | GCWGC | 3 cut(s) | 242, 392, 395 |
| TspDTI | ATGAA | 2 cut(s) | 277, 498 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| TspRI | CASTG | 1 cut(s) | 279 |
| Vha464I | CTTAAG | 1 cut(s) | 298 |
| XceI | RCATGY | 1 cut(s) | 452 |
| XmnI | GAANNNNTTC | 1 cut(s) | 335 |
| ZrmI | AGTACT | 1 cut(s) | 335 |