ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20100 |
| fragaria_vesca | FvH4_6g30220 |
| prunus_persica | Prupe.3G081500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0136461 |
| rosa_laevigata | RLG00000009381 RLG00000013047 RLG00000019533 RLG00000022132 RLG00000023771 RLG00000025350 RLG00000025891 RLG00000033413 RLG00000036964 |
| rosa_multiflora | Rmu_co8388101.1_g000001 Rmu_sc0001998.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00108270 |
| rosa_rugosa | Rorug02G0330700 |
| rosa_samantha | Rh1AG307300 Rh1BG076100 Rh1CG288200 Rh1DG098700 Rh2AG381700 Rh2BG388400 Rh2CG368100 Rh2DG404800 Rh3DG174900 Rh5AG405900 Rh6AG380200 |
| rosa_wichuraiana | Rw2G031200 Rw2G046630 Rw7G033630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 312 |
| AcsI | RAATTY | 1 cut(s) | 94 |
| AcyI | GRCGYC | 3 cut(s) | 5, 279, 288 |
| AfaI | GTAC | 1 cut(s) | 206 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 260 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 9 |
| ApoI | RAATTY | 1 cut(s) | 94 |
| AsuC2I | CCSGG | 1 cut(s) | 9 |
| BanII | GRGCYC | 1 cut(s) | 72 |
| BccI | CCATC | 4 cut(s) | 23, 128, 323, 329 |
| BceAI | ACGGC | 1 cut(s) | 5 |
| BcnI | CCSGG | 1 cut(s) | 9 |
| BfaI | CTAG | 1 cut(s) | 117 |
| BglII | AGATCT | 2 cut(s) | 40, 55 |
| BisI | GCNGC | 1 cut(s) | 312 |
| BlsI | GCNGC | 1 cut(s) | 313 |
| Bme1390I | CCNGG | 1 cut(s) | 9 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 9 |
| BmiI | GGNNCC | 1 cut(s) | 69 |
| BmrFI | CCNGG | 1 cut(s) | 9 |
| BpuMI | CCSGG | 1 cut(s) | 9 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 279, 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 260 |
| Bse3DI | GCAATG | 1 cut(s) | 116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BseMI | GCAATG | 1 cut(s) | 116 |
| BseMII | CTCAG | 2 cut(s) | 58, 308 |
| BsiSI | CCGG | 2 cut(s) | 8, 276 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| Bsp143I | GATC | 4 cut(s) | 40, 55, 153, 246 |
| BspACI | CCGC | 1 cut(s) | 312 |
| BspCNI | CTCAG | 2 cut(s) | 57, 307 |
| BspLI | GGNNCC | 1 cut(s) | 69 |
| BsrDI | GCAATG | 1 cut(s) | 116 |
| BssMI | GATC | 4 cut(s) | 40, 55, 153, 246 |
| BssNI | GRCGYC | 3 cut(s) | 5, 279, 288 |
| BstACI | GRCGYC | 3 cut(s) | 5, 279, 288 |
| BstC8I | GCNNGC | 1 cut(s) | 90 |
| BstDEI | CTNAG | 2 cut(s) | 44, 294 |
| BstKTI | GATC | 4 cut(s) | 43, 58, 156, 249 |
| BstMBI | GATC | 4 cut(s) | 40, 55, 153, 246 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 285 |
| BstSCI | CCNGG | 1 cut(s) | 7 |
| BstX2I | RGATCY | 2 cut(s) | 40, 55 |
| BstYI | RGATCY | 2 cut(s) | 40, 55 |
| BtgZI | GCGATG | 1 cut(s) | 307 |
| BtsI | GCAGTG | 1 cut(s) | 193 |
| BtsIMutI | CAGTG | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 1 cut(s) | 90 |
| CseI | GACGC | 3 cut(s) | 13, 268, 277 |
| Csp6I | GTAC | 1 cut(s) | 205 |
| CviAII | CATG | 1 cut(s) | 305 |
| CviJI | RGCY | 6 cut(s) | 20, 70, 147, 217, 264, 298 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 70, 147, 217, 264, 298 |
| CviQI | GTAC | 1 cut(s) | 205 |
| DdeI | CTNAG | 2 cut(s) | 44, 294 |
| DpnI | GATC | 4 cut(s) | 42, 57, 155, 248 |
| DpnII | GATC | 4 cut(s) | 40, 55, 153, 246 |
| DriI | GACNNNNNGTC | 1 cut(s) | 9 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 9 |
| Eco24I | GRGCYC | 1 cut(s) | 72 |
| EcoT38I | GRGCYC | 1 cut(s) | 72 |
| FaeI | CATG | 1 cut(s) | 308 |
| FaiI | YATR | 2 cut(s) | 267, 306 |
| FatI | CATG | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 1 cut(s) | 312 |
| FriOI | GRGCYC | 1 cut(s) | 72 |
| Fsp4HI | GCNGC | 1 cut(s) | 312 |
| FspBI | CTAG | 1 cut(s) | 117 |
| GluI | GCNGC | 1 cut(s) | 312 |
| HapII | CCGG | 2 cut(s) | 8, 276 |
| HgaI | GACGC | 3 cut(s) | 13, 268, 277 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 279, 288 |
| Hin1II | CATG | 1 cut(s) | 308 |
| HpaII | CCGG | 2 cut(s) | 8, 276 |
| Hpy188I | TCNGA | 3 cut(s) | 47, 104, 160 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 117 |
| Hpy99I | CGWCG | 1 cut(s) | 284 |
| HpyCH4V | TGCA | 2 cut(s) | 186, 232 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 285 |
| HpyF3I | CTNAG | 2 cut(s) | 44, 294 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 279, 288 |
| Hsp92II | CATG | 1 cut(s) | 308 |
| Kzo9I | GATC | 4 cut(s) | 40, 55, 153, 246 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 4 cut(s) | 21, 139, 268, 289 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeIII | GTNAC | 2 cut(s) | 190, 289 |
| MalI | GATC | 4 cut(s) | 42, 57, 155, 248 |
| MboI | GATC | 4 cut(s) | 40, 55, 153, 246 |
| MflI | RGATCY | 2 cut(s) | 40, 55 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MluCI | AATT | 2 cut(s) | 94, 181 |
| MnlI | CCTC | 4 cut(s) | 28, 228, 254, 309 |
| MspI | CCGG | 2 cut(s) | 8, 276 |
| MspR9I | CCNGG | 1 cut(s) | 9 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 285 |
| NciI | CCSGG | 1 cut(s) | 9 |
| NdeII | GATC | 4 cut(s) | 40, 55, 153, 246 |
| NlaIII | CATG | 1 cut(s) | 308 |
| NlaIV | GGNNCC | 1 cut(s) | 69 |
| NmuCI | GTSAC | 2 cut(s) | 190, 289 |
| PkrI | GCNGC | 1 cut(s) | 313 |
| PspN4I | GGNNCC | 1 cut(s) | 69 |
| PsuI | RGATCY | 2 cut(s) | 40, 55 |
| RsaI | GTAC | 1 cut(s) | 206 |
| RsaNI | GTAC | 1 cut(s) | 205 |
| SatI | GCNGC | 1 cut(s) | 312 |
| Sau3AI | GATC | 4 cut(s) | 40, 55, 153, 246 |
| ScrFI | CCNGG | 1 cut(s) | 9 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SetI | ASST | 1 cut(s) | 239 |
| Sse9I | AATT | 2 cut(s) | 94, 181 |
| SsiI | CCGC | 1 cut(s) | 312 |
| SspMI | CTAG | 1 cut(s) | 117 |
| StyD4I | CCNGG | 1 cut(s) | 7 |
| TaqI | TCGA | 1 cut(s) | 149 |
| TasI | AATT | 2 cut(s) | 94, 181 |
| TatI | WGTACW | 1 cut(s) | 204 |
| TauI | GCSGC | 1 cut(s) | 314 |
| TscAI | CASTG | 1 cut(s) | 193 |
| TseFI | GTSAC | 2 cut(s) | 190, 289 |
| Tsp45I | GTSAC | 2 cut(s) | 190, 289 |
| TspDTI | ATGAA | 1 cut(s) | 90 |
| TspGWI | ACGGA | 1 cut(s) | 96 |
| TspRI | CASTG | 1 cut(s) | 193 |
| XapI | RAATTY | 1 cut(s) | 94 |
| XbaI | TCTAGA | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 117 |