Sphingosine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0147181 |
| rosa_laevigata | RLG00000009283 RLG00000009752 |
| rosa_roxburghii | Rroxscaffold_4G00314460 |
| rosa_rugosa | Rorug02G0025400 Rorug06G0087700 |
| rosa_samantha | Rh1CG328700 Rh2CG237800 Rh2DG241000 Rh2DG693200 Rh3DG361200 Rh4AG247200 Rh4AG247900 Rh4CG260600 Rh4DG044600 Rh4DG247900 Rh5AG399200 Rh5BG270900 Rh6AG169600 Rh6AG189100 Rh6BG136000 Rh6BG192300 Rh7AG145600 Rh7CG149600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 8 |
| AciI | CCGC | 2 cut(s) | 113, 144 |
| AcsI | RAATTY | 1 cut(s) | 227 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AflII | CTTAAG | 1 cut(s) | 274 |
| AgsI | TTSAA | 2 cut(s) | 50, 227 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 158, 190 |
| AluBI | AGCT | 5 cut(s) | 100, 152, 220, 257, 279 |
| AluI | AGCT | 5 cut(s) | 100, 152, 220, 257, 279 |
| Alw21I | GWGCWC | 1 cut(s) | 154 |
| ApeKI | GCWGC | 3 cut(s) | 17, 141, 210 |
| ApoI | RAATTY | 1 cut(s) | 227 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 158, 190 |
| AspS9I | GGNCC | 1 cut(s) | 70 |
| AvaII | GGWCC | 1 cut(s) | 70 |
| BanII | GRGCYC | 1 cut(s) | 154 |
| Bbv12I | GWGCWC | 1 cut(s) | 154 |
| BbvI | GCAGC | 3 cut(s) | 29, 153, 197 |
| BceAI | ACGGC | 1 cut(s) | 126 |
| BfaI | CTAG | 1 cut(s) | 56 |
| BfrI | CTTAAG | 1 cut(s) | 274 |
| BisI | GCNGC | 3 cut(s) | 18, 142, 211 |
| BlsI | GCNGC | 3 cut(s) | 19, 143, 212 |
| Bme18I | GGWCC | 1 cut(s) | 70 |
| BmgT120I | GGNCC | 1 cut(s) | 70 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 141, 171 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseXI | GCAGC | 3 cut(s) | 29, 153, 197 |
| BsiHKAI | GWGCWC | 1 cut(s) | 154 |
| Bsp1286I | GDGCHC | 1 cut(s) | 154 |
| BspACI | CCGC | 2 cut(s) | 113, 144 |
| BspHI | TCATGA | 1 cut(s) | 159 |
| BspTI | CTTAAG | 1 cut(s) | 274 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 274 |
| BstV1I | GCAGC | 3 cut(s) | 29, 153, 197 |
| CciI | TCATGA | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 70 |
| CviAII | CATG | 1 cut(s) | 160 |
| CviJI | RGCY | 9 cut(s) | 20, 34, 45, 100, 152, 181, 220, 257, 279 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 34, 45, 100, 152, 181, 220, 257, 279 |
| EciI | GGCGGA | 1 cut(s) | 128 |
| Ecl136II | GAGCTC | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 1 cut(s) | 154 |
| Eco47I | GGWCC | 1 cut(s) | 70 |
| Eco53kI | GAGCTC | 1 cut(s) | 152 |
| EcoICRI | GAGCTC | 1 cut(s) | 152 |
| EcoRI | GAATTC | 1 cut(s) | 227 |
| EcoT38I | GRGCYC | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 163 |
| FaiI | YATR | 2 cut(s) | 126, 161 |
| FatI | CATG | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 3 cut(s) | 18, 142, 211 |
| FriOI | GRGCYC | 1 cut(s) | 154 |
| Fsp4HI | GCNGC | 3 cut(s) | 18, 142, 211 |
| FspBI | CTAG | 1 cut(s) | 56 |
| GluI | GCNGC | 3 cut(s) | 18, 142, 211 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 163 |
| HincII | GTYRAC | 1 cut(s) | 108 |
| HindII | GTYRAC | 1 cut(s) | 108 |
| HindIII | AAGCTT | 1 cut(s) | 218 |
| HinfI | GANTC | 3 cut(s) | 92, 194, 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 108 |
| Hpy188I | TCNGA | 3 cut(s) | 91, 190, 271 |
| Hpy188III | TCNNGA | 2 cut(s) | 160, 224 |
| Hpy8I | GTNNAC | 1 cut(s) | 108 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 2 cut(s) | 56, 157 |
| HpyCH4IV | ACGT | 1 cut(s) | 5 |
| HpySE526I | ACGT | 1 cut(s) | 5 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 163 |
| LmnI | GCTCC | 2 cut(s) | 138, 149 |
| LpnPI | CCDG | 2 cut(s) | 88, 140 |
| Lsp1109I | GCAGC | 3 cut(s) | 29, 153, 197 |
| MaeI | CTAG | 1 cut(s) | 56 |
| MaeII | ACGT | 1 cut(s) | 5 |
| MaeIII | GTNAC | 1 cut(s) | 9 |
| MhlI | GDGCHC | 1 cut(s) | 154 |
| MluCI | AATT | 3 cut(s) | 50, 227, 247 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MnlI | CCTC | 7 cut(s) | 37, 61, 70, 74, 109, 140, 184 |
| MseI | TTAA | 1 cut(s) | 275 |
| MspA1I | CMGCKG | 1 cut(s) | 144 |
| MspCI | CTTAAG | 1 cut(s) | 274 |
| NlaIII | CATG | 1 cut(s) | 163 |
| NmuCI | GTSAC | 1 cut(s) | 9 |
| PagI | TCATGA | 1 cut(s) | 159 |
| PfeI | GAWTC | 2 cut(s) | 92, 236 |
| PflFI | GACNNNGTC | 1 cut(s) | 7 |
| PkrI | GCNGC | 3 cut(s) | 19, 143, 212 |
| PleI | GAGTC | 1 cut(s) | 188 |
| PpsI | GAGTC | 1 cut(s) | 188 |
| Psp124BI | GAGCTC | 1 cut(s) | 154 |
| PspPI | GGNCC | 1 cut(s) | 70 |
| PsyI | GACNNNGTC | 1 cut(s) | 7 |
| SacI | GAGCTC | 1 cut(s) | 154 |
| SaqAI | TTAA | 1 cut(s) | 275 |
| SatI | GCNGC | 3 cut(s) | 18, 142, 211 |
| Sau96I | GGNCC | 1 cut(s) | 70 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SduI | GDGCHC | 1 cut(s) | 154 |
| SetI | ASST | 8 cut(s) | 8, 85, 102, 120, 154, 222, 259, 281 |
| SinI | GGWCC | 1 cut(s) | 70 |
| SmlI | CTYRAG | 1 cut(s) | 274 |
| SmoI | CTYRAG | 1 cut(s) | 274 |
| Sse9I | AATT | 3 cut(s) | 50, 227, 247 |
| SsiI | CCGC | 2 cut(s) | 113, 144 |
| SspMI | CTAG | 1 cut(s) | 56 |
| SstI | GAGCTC | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 8 |
| TaqI | TCGA | 4 cut(s) | 41, 95, 177, 253 |
| TasI | AATT | 3 cut(s) | 50, 227, 247 |
| TfiI | GAWTC | 2 cut(s) | 92, 236 |
| Tru1I | TTAA | 1 cut(s) | 275 |
| Tru9I | TTAA | 1 cut(s) | 275 |
| TseFI | GTSAC | 1 cut(s) | 9 |
| TseI | GCWGC | 3 cut(s) | 17, 141, 210 |
| Tsp45I | GTSAC | 1 cut(s) | 9 |
| TspDTI | ATGAA | 2 cut(s) | 176, 220 |
| TspGWI | ACGGA | 1 cut(s) | 80 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7 |
| Vha464I | CTTAAG | 1 cut(s) | 274 |
| VpaK11BI | GGWCC | 1 cut(s) | 70 |
| XapI | RAATTY | 1 cut(s) | 227 |
| XspI | CTAG | 1 cut(s) | 56 |
| ZraI | GACGTC | 1 cut(s) | 6 |