tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27110 AT1G27110 AT1G27110 AT1G27110 AT1G27150 |
| fragaria_vesca | FvH4_4g35610 |
| malus_domestica | MD16G1081000.v1.1 |
| prunus_persica | Prupe.1G265000_v2.0.a1 Prupe.1G265000_v2.0.a1 |
| pyrus_communis | pycom13g07070 pycom16g07000 |
| rosa_chinensis | RchiOBHm_Chr2g0130381 RchiOBHm_Chr4g0445221 RchiOBHm_Chr7g0206221 |
| rosa_laevigata | RLG00000009788 RLG00000028785 |
| rosa_multiflora | Rmu_sc0000050.1_g000030 Rmu_sc0031087.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00385730 |
| rosa_rugosa | Rorug03G0340400 Rorug04G0360000 |
| rosa_samantha | Rh1AG190600 Rh1CG176000 Rh2BG351600 Rh4AG420900 Rh4BG432800 Rh4CG447500 Rh4DG154900 Rh4DG428900 Rh7DG233700 |
| rosa_wichuraiana | Rw4G036100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 298 |
| AcsI | RAATTY | 1 cut(s) | 350 |
| AcuI | CTGAAG | 1 cut(s) | 276 |
| AfaI | GTAC | 2 cut(s) | 270, 333 |
| AgsI | TTSAA | 1 cut(s) | 238 |
| AluBI | AGCT | 1 cut(s) | 104 |
| AluI | AGCT | 1 cut(s) | 104 |
| Alw21I | GWGCWC | 1 cut(s) | 361 |
| AlwI | GGATC | 1 cut(s) | 298 |
| ApeKI | GCWGC | 1 cut(s) | 310 |
| ApoI | RAATTY | 1 cut(s) | 350 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 351 |
| AspS9I | GGNCC | 1 cut(s) | 200 |
| AvaII | GGWCC | 1 cut(s) | 200 |
| Bbv12I | GWGCWC | 1 cut(s) | 361 |
| BbvI | GCAGC | 1 cut(s) | 297 |
| BccI | CCATC | 1 cut(s) | 168 |
| BfaI | CTAG | 1 cut(s) | 326 |
| BisI | GCNGC | 1 cut(s) | 311 |
| BlsI | GCNGC | 1 cut(s) | 312 |
| Bme18I | GGWCC | 1 cut(s) | 200 |
| BmgT120I | GGNCC | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 181 |
| BpmI | CTGGAG | 1 cut(s) | 114 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| Bse1I | ACTGG | 1 cut(s) | 131 |
| BseGI | GGATG | 1 cut(s) | 334 |
| BseMII | CTCAG | 1 cut(s) | 213 |
| BseNI | ACTGG | 1 cut(s) | 131 |
| BseXI | GCAGC | 1 cut(s) | 297 |
| BsiHKAI | GWGCWC | 1 cut(s) | 361 |
| Bsp1286I | GDGCHC | 1 cut(s) | 361 |
| Bsp143I | GATC | 1 cut(s) | 290 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BspPI | GGATC | 1 cut(s) | 298 |
| BsrI | ACTGG | 1 cut(s) | 131 |
| BssMI | GATC | 1 cut(s) | 290 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 307 |
| BstDEI | CTNAG | 2 cut(s) | 145, 222 |
| BstF5I | GGATG | 1 cut(s) | 334 |
| BstKTI | GATC | 1 cut(s) | 293 |
| BstMBI | GATC | 1 cut(s) | 290 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 307 |
| BstNSI | RCATGY | 1 cut(s) | 101 |
| BstV1I | GCAGC | 1 cut(s) | 297 |
| BtsCI | GGATG | 1 cut(s) | 334 |
| Cfr13I | GGNCC | 1 cut(s) | 200 |
| Csp6I | GTAC | 2 cut(s) | 269, 332 |
| CviAII | CATG | 5 cut(s) | 34, 42, 54, 98, 243 |
| CviJI | RGCY | 4 cut(s) | 104, 226, 248, 325 |
| CviKI_1 | RGCY | 4 cut(s) | 104, 226, 248, 325 |
| CviQI | GTAC | 2 cut(s) | 269, 332 |
| DdeI | CTNAG | 2 cut(s) | 145, 222 |
| DpnI | GATC | 1 cut(s) | 292 |
| DpnII | GATC | 1 cut(s) | 290 |
| DraI | TTTAAA | 1 cut(s) | 16 |
| Eco47I | GGWCC | 1 cut(s) | 200 |
| Eco57I | CTGAAG | 1 cut(s) | 276 |
| FaeI | CATG | 5 cut(s) | 37, 45, 57, 101, 246 |
| FatI | CATG | 5 cut(s) | 33, 41, 53, 97, 242 |
| Fnu4HI | GCNGC | 1 cut(s) | 311 |
| FokI | GGATG | 1 cut(s) | 321 |
| Fsp4HI | GCNGC | 1 cut(s) | 311 |
| FspBI | CTAG | 1 cut(s) | 326 |
| GluI | GCNGC | 1 cut(s) | 311 |
| GsuI | CTGGAG | 1 cut(s) | 114 |
| Hin1II | CATG | 5 cut(s) | 37, 45, 57, 101, 246 |
| HinfI | GANTC | 4 cut(s) | 38, 59, 141, 251 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 2 cut(s) | 169, 368 |
| HpyAV | CCTTC | 3 cut(s) | 113, 166, 251 |
| HpyCH4V | TGCA | 1 cut(s) | 313 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 307 |
| HpyF3I | CTNAG | 2 cut(s) | 145, 222 |
| Hsp92II | CATG | 5 cut(s) | 37, 45, 57, 101, 246 |
| Kzo9I | GATC | 1 cut(s) | 290 |
| LmnI | GCTCC | 1 cut(s) | 364 |
| LpnPI | CCDG | 3 cut(s) | 144, 154, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 297 |
| LweI | GCATC | 1 cut(s) | 181 |
| MaeI | CTAG | 1 cut(s) | 326 |
| MalI | GATC | 1 cut(s) | 292 |
| MboI | GATC | 1 cut(s) | 290 |
| MboII | GAAGA | 1 cut(s) | 359 |
| MfeI | CAATTG | 1 cut(s) | 88 |
| MhlI | GDGCHC | 1 cut(s) | 361 |
| MluCI | AATT | 2 cut(s) | 88, 350 |
| MlyI | GAGTC | 1 cut(s) | 135 |
| MmeI | TCCRAC | 1 cut(s) | 159 |
| MnlI | CCTC | 2 cut(s) | 199, 335 |
| MroXI | GAANNNNTTC | 1 cut(s) | 351 |
| MseI | TTAA | 1 cut(s) | 15 |
| MunI | CAATTG | 1 cut(s) | 88 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 307 |
| NdeII | GATC | 1 cut(s) | 290 |
| NlaIII | CATG | 5 cut(s) | 37, 45, 57, 101, 246 |
| NspI | RCATGY | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 351 |
| PfeI | GAWTC | 3 cut(s) | 38, 59, 251 |
| PkrI | GCNGC | 1 cut(s) | 312 |
| PleI | GAGTC | 1 cut(s) | 135 |
| PpsI | GAGTC | 1 cut(s) | 135 |
| PspPI | GGNCC | 1 cut(s) | 200 |
| RsaI | GTAC | 2 cut(s) | 270, 333 |
| RsaNI | GTAC | 2 cut(s) | 269, 332 |
| SaqAI | TTAA | 1 cut(s) | 15 |
| SatI | GCNGC | 1 cut(s) | 311 |
| Sau3AI | GATC | 1 cut(s) | 290 |
| Sau96I | GGNCC | 1 cut(s) | 200 |
| SchI | GAGTC | 1 cut(s) | 135 |
| SduI | GDGCHC | 1 cut(s) | 361 |
| SetI | ASST | 5 cut(s) | 106, 124, 210, 270, 378 |
| SfaNI | GCATC | 1 cut(s) | 181 |
| SinI | GGWCC | 1 cut(s) | 200 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| Sse9I | AATT | 2 cut(s) | 88, 350 |
| SspMI | CTAG | 1 cut(s) | 326 |
| TaqI | TCGA | 1 cut(s) | 135 |
| TasI | AATT | 2 cut(s) | 88, 350 |
| TatI | WGTACW | 1 cut(s) | 331 |
| TfiI | GAWTC | 3 cut(s) | 38, 59, 251 |
| Tru1I | TTAA | 1 cut(s) | 15 |
| Tru9I | TTAA | 1 cut(s) | 15 |
| TseI | GCWGC | 1 cut(s) | 310 |
| TspDTI | ATGAA | 1 cut(s) | 22 |
| VpaK11BI | GGWCC | 1 cut(s) | 200 |
| XapI | RAATTY | 1 cut(s) | 350 |
| XceI | RCATGY | 1 cut(s) | 101 |
| XmnI | GAANNNNTTC | 1 cut(s) | 351 |
| XspI | CTAG | 1 cut(s) | 326 |