40S ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S25 | PF03297 | 7 - 105 | 7.3e-41 | S25 ribosomal protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AciI | CCGC | 2 cut(s) | 45, 57 |
| AclWI | GGATC | 1 cut(s) | 229 |
| AdeI | CACNNNGTG | 1 cut(s) | 236 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 151, 178 |
| AluI | AGCT | 2 cut(s) | 151, 178 |
| AlwI | GGATC | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 135 |
| AseI | ATTAAT | 1 cut(s) | 216 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BbvCI | CCTCAGC | 1 cut(s) | 209 |
| BccI | CCATC | 1 cut(s) | 247 |
| BceAI | ACGGC | 1 cut(s) | 219 |
| BfaI | CTAG | 1 cut(s) | 291 |
| BglII | AGATCT | 1 cut(s) | 300 |
| BmiI | GGNNCC | 3 cut(s) | 6, 24, 165 |
| Bpu10I | CCTNAGC | 1 cut(s) | 209 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 76, 106 |
| BseGI | GGATG | 1 cut(s) | 279 |
| BseMII | CTCAG | 1 cut(s) | 200 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiSI | CCGG | 1 cut(s) | 54 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp143I | GATC | 3 cut(s) | 130, 221, 300 |
| BspACI | CCGC | 2 cut(s) | 45, 57 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspCNI | CTCAG | 1 cut(s) | 201 |
| BspLI | GGNNCC | 3 cut(s) | 6, 24, 165 |
| BspPI | GGATC | 1 cut(s) | 229 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BssMI | GATC | 3 cut(s) | 130, 221, 300 |
| Bst4CI | ACNGT | 1 cut(s) | 33 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 236 |
| BstC8I | GCNNGC | 3 cut(s) | 45, 65, 232 |
| BstDEI | CTNAG | 1 cut(s) | 209 |
| BstF5I | GGATG | 1 cut(s) | 279 |
| BstKTI | GATC | 3 cut(s) | 133, 224, 303 |
| BstMBI | GATC | 3 cut(s) | 130, 221, 300 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 236 |
| BstX2I | RGATCY | 1 cut(s) | 300 |
| BstYI | RGATCY | 1 cut(s) | 300 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 279 |
| Cac8I | GCNNGC | 3 cut(s) | 45, 65, 232 |
| CviAII | CATG | 2 cut(s) | 118, 287 |
| CviJI | RGCY | 8 cut(s) | 23, 43, 137, 151, 164, 178, 208, 314 |
| CviKI_1 | RGCY | 8 cut(s) | 23, 43, 137, 151, 164, 178, 208, 314 |
| DdeI | CTNAG | 1 cut(s) | 209 |
| DpnI | GATC | 3 cut(s) | 132, 223, 302 |
| DpnII | GATC | 3 cut(s) | 130, 221, 300 |
| DraIII | CACNNNGTG | 1 cut(s) | 236 |
| EciI | GGCGGA | 1 cut(s) | 72 |
| FaeI | CATG | 2 cut(s) | 121, 290 |
| FaiI | YATR | 3 cut(s) | 119, 144, 288 |
| FatI | CATG | 2 cut(s) | 117, 286 |
| FauI | CCCGC | 1 cut(s) | 52 |
| FokI | GGATG | 1 cut(s) | 286 |
| FspBI | CTAG | 1 cut(s) | 291 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HapII | CCGG | 1 cut(s) | 54 |
| Hin1II | CATG | 2 cut(s) | 121, 290 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HpaII | CCGG | 1 cut(s) | 54 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 2 cut(s) | 160, 202 |
| Hpy8I | GTNNAC | 1 cut(s) | 112 |
| HpyAV | CCTTC | 3 cut(s) | 7, 100, 198 |
| HpyCH4III | ACNGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 1 cut(s) | 239 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 236 |
| HpyF3I | CTNAG | 1 cut(s) | 209 |
| Hsp92II | CATG | 2 cut(s) | 121, 290 |
| Kzo9I | GATC | 3 cut(s) | 130, 221, 300 |
| LmnI | GCTCC | 3 cut(s) | 28, 84, 169 |
| LpnPI | CCDG | 4 cut(s) | 67, 119, 190, 322 |
| MaeI | CTAG | 1 cut(s) | 291 |
| MalI | GATC | 3 cut(s) | 132, 223, 302 |
| MboI | GATC | 3 cut(s) | 130, 221, 300 |
| MboII | GAAGA | 3 cut(s) | 82, 85, 88 |
| MflI | RGATCY | 1 cut(s) | 300 |
| MluCI | AATT | 1 cut(s) | 240 |
| MnlI | CCTC | 4 cut(s) | 46, 53, 154, 204 |
| MseI | TTAA | 2 cut(s) | 216, 243 |
| MspI | CCGG | 1 cut(s) | 54 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 236 |
| NdeII | GATC | 3 cut(s) | 130, 221, 300 |
| NlaIII | CATG | 2 cut(s) | 121, 290 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 24, 165 |
| PshBI | ATTAAT | 1 cut(s) | 216 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 24, 165 |
| PsuI | RGATCY | 1 cut(s) | 300 |
| SaqAI | TTAA | 2 cut(s) | 216, 243 |
| Sau3AI | GATC | 3 cut(s) | 130, 221, 300 |
| SetI | ASST | 4 cut(s) | 111, 153, 180, 326 |
| Sse9I | AATT | 1 cut(s) | 240 |
| SsiI | CCGC | 2 cut(s) | 45, 57 |
| SspMI | CTAG | 1 cut(s) | 291 |
| TaaI | ACNGT | 1 cut(s) | 33 |
| TaqI | TCGA | 1 cut(s) | 129 |
| TasI | AATT | 1 cut(s) | 240 |
| Tru1I | TTAA | 2 cut(s) | 216, 243 |
| Tru9I | TTAA | 2 cut(s) | 216, 243 |
| VspI | ATTAAT | 1 cut(s) | 216 |
| XspI | CTAG | 1 cut(s) | 291 |