ZINC FINGER protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75560 AT1G75560 |
| fragaria_vesca | FvH4_2g10323 FvH4_2g10323 FvH4_7g21972 |
| malus_domestica | MD00G1040200.v1.1 MD01G1124300.v1.1 MD10G1063900.v1.1 |
| prunus_persica | Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.8G085500_v2.0.a1 |
| pyrus_communis | pycom01g15080 pycom05g04680 pycom10g04940 |
| rosa_chinensis | RchiOBHm_Chr1g0366331 RchiOBHm_Chr6g0267601 |
| rosa_roxburghii | Rroxscaffold_4G00289990 Rroxscaffold_4G00290250 Rroxscaffold_7G00200570 |
| rosa_rugosa | Rorug01G0329000 Rorug06G0033800 |
| rosa_samantha | Rh1AG337200 Rh1BG298700 Rh1CG314000 Rh1DG330200 Rh6AG155500 Rh6BG156800 Rh6CG152400 Rh6DG142000 |
| rosa_wichuraiana | Rw1G029890 Rw6G013360 Rw6G013510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 263 |
| AccI | GTMKAC | 1 cut(s) | 792 |
| AccII | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| AclWI | GGATC | 3 cut(s) | 418, 423, 1140 |
| AcoI | YGGCCR | 3 cut(s) | 529, 651, 900 |
| AcsI | RAATTY | 1 cut(s) | 356 |
| AcyI | GRCGYC | 2 cut(s) | 257, 264 |
| AfaI | GTAC | 2 cut(s) | 607, 1151 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 74, 671 |
| AflII | CTTAAG | 1 cut(s) | 748 |
| AflIII | ACRYGT | 1 cut(s) | 876 |
| AjnI | CCWGG | 9 cut(s) | 259, 284, 526, 640, 739, 840, 902, 1098, 1142 |
| AleI | CACNNNNGTG | 2 cut(s) | 573, 687 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 156, 188 |
| AluBI | AGCT | 3 cut(s) | 86, 202, 340 |
| AluI | AGCT | 3 cut(s) | 86, 202, 340 |
| Alw21I | GWGCWC | 2 cut(s) | 34, 113 |
| Alw26I | GTCTC | 2 cut(s) | 492, 708 |
| AlwI | GGATC | 3 cut(s) | 418, 423, 1140 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 660 |
| Ama87I | CYCGRG | 1 cut(s) | 584 |
| AoxI | GGCC | 4 cut(s) | 529, 651, 900, 1057 |
| ApaI | GGGCCC | 1 cut(s) | 1061 |
| ApeKI | GCWGC | 1 cut(s) | 725 |
| ApoI | RAATTY | 1 cut(s) | 356 |
| AspA2I | CCTAGG | 1 cut(s) | 167 |
| AspLEI | GCGC | 2 cut(s) | 266, 847 |
| AspS9I | GGNCC | 4 cut(s) | 4, 164, 1057, 1058 |
| AsuC2I | CCSGG | 2 cut(s) | 585, 586 |
| AsuHPI | GGTGA | 2 cut(s) | 240, 830 |
| AvaI | CYCGRG | 1 cut(s) | 584 |
| AvaII | GGWCC | 2 cut(s) | 4, 164 |
| AvrII | CCTAGG | 1 cut(s) | 167 |
| AxyI | CCTNAGG | 2 cut(s) | 24, 411 |
| BaeGI | GKGCMC | 4 cut(s) | 591, 914, 1061, 1115 |
| BalI | TGGCCA | 3 cut(s) | 531, 653, 902 |
| BanI | GGYRCC | 1 cut(s) | 263 |
| BanII | GRGCYC | 2 cut(s) | 410, 1061 |
| BbsI | GAAGAC | 2 cut(s) | 572, 836 |
| Bbv12I | GWGCWC | 2 cut(s) | 34, 113 |
| BbvI | GCAGC | 1 cut(s) | 712 |
| BccI | CCATC | 3 cut(s) | 464, 875, 1005 |
| BceAI | ACGGC | 2 cut(s) | 75, 229 |
| BciT130I | CCWGG | 9 cut(s) | 261, 286, 528, 642, 741, 842, 904, 1100, 1144 |
| BcnI | CCSGG | 2 cut(s) | 585, 586 |
| BcoDI | GTCTC | 2 cut(s) | 492, 708 |
| BfaI | CTAG | 4 cut(s) | 168, 341, 540, 711 |
| BfmI | CTRYAG | 2 cut(s) | 102, 823 |
| BfoI | RGCGCY | 1 cut(s) | 267 |
| BfrI | CTTAAG | 1 cut(s) | 748 |
| BisI | GCNGC | 6 cut(s) | 58, 61, 213, 726, 976, 985 |
| BlnI | CCTAGG | 1 cut(s) | 167 |
| BlsI | GCNGC | 6 cut(s) | 59, 62, 214, 727, 977, 986 |
| Bme18I | GGWCC | 2 cut(s) | 4, 164 |
| BmeT110I | CYCGRG | 1 cut(s) | 584 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 164, 1057, 1058 |
| BmiI | GGNNCC | 7 cut(s) | 79, 165, 265, 383, 407, 1059, 1060 |
| BmsI | GCATC | 3 cut(s) | 144, 442, 684 |
| BpiI | GAAGAC | 2 cut(s) | 572, 836 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 489, 521 |
| Bpu10I | CCTNAGC | 1 cut(s) | 386 |
| BpuMI | CCSGG | 2 cut(s) | 585, 586 |
| BsaAI | YACGTR | 1 cut(s) | 74 |
| BsaHI | GRCGYC | 2 cut(s) | 257, 264 |
| BsaJI | CCNNGG | 5 cut(s) | 167, 285, 584, 740, 1142 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 457, 487 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 74, 671 |
| Bse1I | ACTGG | 1 cut(s) | 654 |
| Bse21I | CCTNAGG | 2 cut(s) | 24, 411 |
| Bse3DI | GCAATG | 2 cut(s) | 591, 889 |
| BseBI | CCWGG | 9 cut(s) | 261, 286, 528, 642, 741, 842, 904, 1100, 1144 |
| BseDI | CCNNGG | 5 cut(s) | 167, 285, 584, 740, 1142 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 74, 671 |
| BseMI | GCAATG | 2 cut(s) | 591, 889 |
| BseMII | CTCAG | 1 cut(s) | 38 |
| BseNI | ACTGG | 1 cut(s) | 654 |
| BseRI | GAGGAG | 2 cut(s) | 305, 957 |
| BseSI | GKGCMC | 4 cut(s) | 591, 914, 1061, 1115 |
| BseXI | GCAGC | 1 cut(s) | 712 |
| BsgI | GTGCAG | 2 cut(s) | 703, 781 |
| Bsh1236I | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| BshFI | GGCC | 4 cut(s) | 531, 653, 902, 1059 |
| BshNI | GGYRCC | 1 cut(s) | 263 |
| BsiHKAI | GWGCWC | 2 cut(s) | 34, 113 |
| BsiHKCI | CYCGRG | 1 cut(s) | 584 |
| BsiSI | CCGG | 1 cut(s) | 585 |
| BslFI | GGGAC | 2 cut(s) | 177, 758 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 74, 671 |
| BsmAI | GTCTC | 2 cut(s) | 492, 708 |
| BsmFI | GGGAC | 2 cut(s) | 177, 758 |
| BsmI | GAATGC | 1 cut(s) | 551 |
| BsnI | GGCC | 4 cut(s) | 531, 653, 902, 1059 |
| BsoBI | CYCGRG | 1 cut(s) | 584 |
| Bsp120I | GGGCCC | 1 cut(s) | 1057 |
| Bsp1286I | GDGCHC | 7 cut(s) | 34, 113, 410, 591, 914, 1061, 1115 |
| Bsp143I | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| Bsp68I | TCGCGA | 1 cut(s) | 189 |
| BspANI | GGCC | 4 cut(s) | 531, 653, 902, 1059 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BspFNI | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| BspLI | GGNNCC | 7 cut(s) | 79, 165, 265, 383, 407, 1059, 1060 |
| BspMAI | CTGCAG | 1 cut(s) | 106 |
| BspPI | GGATC | 3 cut(s) | 418, 423, 1140 |
| BspT107I | GGYRCC | 1 cut(s) | 263 |
| BspTI | CTTAAG | 1 cut(s) | 748 |
| BsrDI | GCAATG | 2 cut(s) | 591, 889 |
| BsrI | ACTGG | 1 cut(s) | 654 |
| BssECI | CCNNGG | 5 cut(s) | 167, 285, 584, 740, 1142 |
| BssMI | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| BssNI | GRCGYC | 2 cut(s) | 257, 264 |
| BssT1I | CCWWGG | 1 cut(s) | 167 |
| Bst2UI | CCWGG | 9 cut(s) | 261, 286, 528, 642, 741, 842, 904, 1100, 1144 |
| Bst4CI | ACNGT | 4 cut(s) | 220, 707, 824, 1082 |
| BstACI | GRCGYC | 2 cut(s) | 257, 264 |
| BstAFI | CTTAAG | 1 cut(s) | 748 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 516, 765, 1050 |
| BstBAI | YACGTR | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 5 cut(s) | 65, 88, 229, 814, 1025 |
| BstDEI | CTNAG | 3 cut(s) | 24, 386, 411 |
| BstEII | GGTNACC | 1 cut(s) | 836 |
| BstFNI | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| BstH2I | RGCGCY | 1 cut(s) | 267 |
| BstHHI | GCGC | 2 cut(s) | 266, 847 |
| BstKTI | GATC | 5 cut(s) | 418, 426, 436, 1071, 1135 |
| BstMAI | GTCTC | 2 cut(s) | 492, 708 |
| BstMBI | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 272, 516, 765, 981, 984, 990, 1033, 1050 |
| BstNI | CCWGG | 9 cut(s) | 261, 286, 528, 642, 741, 842, 904, 1100, 1144 |
| BstNSI | RCATGY | 2 cut(s) | 880, 899 |
| BstPI | GGTNACC | 1 cut(s) | 836 |
| BstSFI | CTRYAG | 2 cut(s) | 102, 823 |
| BstSLI | GKGCMC | 4 cut(s) | 591, 914, 1061, 1115 |
| BstUI | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| BstV1I | GCAGC | 1 cut(s) | 712 |
| BstV2I | GAAGAC | 2 cut(s) | 572, 836 |
| BstX2I | RGATCY | 1 cut(s) | 423 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 689, 928, 1031 |
| BstYI | RGATCY | 1 cut(s) | 423 |
| Bsu36I | CCTNAGG | 2 cut(s) | 24, 411 |
| BsuRI | GGCC | 4 cut(s) | 531, 653, 902, 1059 |
| BtsI | GCAGTG | 3 cut(s) | 303, 720, 914 |
| BtsIMutI | CAGTG | 4 cut(s) | 303, 339, 720, 914 |
| BtuMI | TCGCGA | 1 cut(s) | 189 |
| Cac8I | GCNNGC | 5 cut(s) | 65, 88, 229, 814, 1025 |
| CaiI | CAGNNNCTG | 1 cut(s) | 660 |
| CfoI | GCGC | 2 cut(s) | 266, 847 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 164, 1057, 1058 |
| Cfr9I | CCCGGG | 1 cut(s) | 584 |
| CseI | GACGC | 1 cut(s) | 265 |
| CsiI | ACCWGGT | 1 cut(s) | 640 |
| Csp6I | GTAC | 2 cut(s) | 606, 1150 |
| CviAII | CATG | 6 cut(s) | 364, 649, 877, 896, 1054, 1129 |
| CviQI | GTAC | 2 cut(s) | 606, 1150 |
| DdeI | CTNAG | 3 cut(s) | 24, 386, 411 |
| DinI | GGCGCC | 1 cut(s) | 265 |
| DpnI | GATC | 5 cut(s) | 417, 425, 435, 1070, 1134 |
| DpnII | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| EaeI | YGGCCR | 3 cut(s) | 529, 651, 900 |
| EciI | GGCGGA | 2 cut(s) | 44, 199 |
| Eco130I | CCWWGG | 1 cut(s) | 167 |
| Eco24I | GRGCYC | 2 cut(s) | 410, 1061 |
| Eco47I | GGWCC | 2 cut(s) | 4, 164 |
| Eco81I | CCTNAGG | 2 cut(s) | 24, 411 |
| Eco88I | CYCGRG | 1 cut(s) | 584 |
| Eco91I | GGTNACC | 1 cut(s) | 836 |
| EcoO109I | RGGNCCY | 2 cut(s) | 164, 1058 |
| EcoO65I | GGTNACC | 1 cut(s) | 836 |
| EcoRII | CCWGG | 9 cut(s) | 259, 284, 526, 640, 739, 840, 902, 1098, 1142 |
| EcoT14I | CCWWGG | 1 cut(s) | 167 |
| EcoT38I | GRGCYC | 2 cut(s) | 410, 1061 |
| EgeI | GGCGCC | 1 cut(s) | 265 |
| EheI | GGCGCC | 1 cut(s) | 265 |
| ErhI | CCWWGG | 1 cut(s) | 167 |
| FaeI | CATG | 6 cut(s) | 367, 652, 880, 899, 1057, 1132 |
| FaqI | GGGAC | 2 cut(s) | 177, 758 |
| FatI | CATG | 6 cut(s) | 363, 648, 876, 895, 1053, 1128 |
| FauI | CCCGC | 1 cut(s) | 236 |
| FauNDI | CATATG | 2 cut(s) | 1038, 1105 |
| FblI | GTMKAC | 1 cut(s) | 792 |
| Fnu4HI | GCNGC | 6 cut(s) | 58, 61, 213, 726, 976, 985 |
| FriOI | GRGCYC | 2 cut(s) | 410, 1061 |
| Fsp4HI | GCNGC | 6 cut(s) | 58, 61, 213, 726, 976, 985 |
| FspBI | CTAG | 4 cut(s) | 168, 341, 540, 711 |
| GlaI | GCGC | 2 cut(s) | 265, 846 |
| GluI | GCNGC | 6 cut(s) | 58, 61, 213, 726, 976, 985 |
| HaeII | RGCGCY | 1 cut(s) | 267 |
| HaeIII | GGCC | 4 cut(s) | 531, 653, 902, 1059 |
| HapII | CCGG | 1 cut(s) | 585 |
| HgaI | GACGC | 1 cut(s) | 265 |
| HhaI | GCGC | 2 cut(s) | 266, 847 |
| Hin1I | GRCGYC | 2 cut(s) | 257, 264 |
| Hin1II | CATG | 6 cut(s) | 367, 652, 880, 899, 1057, 1132 |
| Hin6I | GCGC | 2 cut(s) | 264, 845 |
| HinP1I | GCGC | 2 cut(s) | 264, 845 |
| HincII | GTYRAC | 1 cut(s) | 793 |
| HindII | GTYRAC | 1 cut(s) | 793 |
| HindIII | AAGCTT | 1 cut(s) | 200 |
| HpaII | CCGG | 1 cut(s) | 585 |
| HphI | GGTGA | 2 cut(s) | 240, 830 |
| Hpy166II | GTNNAC | 3 cut(s) | 606, 638, 793 |
| Hpy188I | TCNGA | 6 cut(s) | 115, 152, 181, 373, 433, 601 |
| Hpy188III | TCNNGA | 4 cut(s) | 188, 449, 635, 1001 |
| Hpy8I | GTNNAC | 3 cut(s) | 606, 638, 793 |
| Hpy99I | CGWCG | 2 cut(s) | 259, 480 |
| HpyAV | CCTTC | 5 cut(s) | 261, 277, 665, 802, 1125 |
| HpyCH4III | ACNGT | 4 cut(s) | 220, 707, 824, 1082 |
| HpyCH4IV | ACGT | 1 cut(s) | 73 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 272, 516, 765, 981, 984, 990, 1033, 1050 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 386, 411 |
| HpySE526I | ACGT | 1 cut(s) | 73 |
| Hsp92I | GRCGYC | 2 cut(s) | 257, 264 |
| Hsp92II | CATG | 6 cut(s) | 367, 652, 880, 899, 1057, 1132 |
| HspAI | GCGC | 2 cut(s) | 264, 845 |
| KasI | GGCGCC | 1 cut(s) | 263 |
| Kzo9I | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| LmnI | GCTCC | 7 cut(s) | 29, 57, 337, 381, 393, 399, 405 |
| Lsp1109I | GCAGC | 1 cut(s) | 712 |
| LweI | GCATC | 3 cut(s) | 144, 442, 684 |
| MabI | ACCWGGT | 1 cut(s) | 640 |
| MaeI | CTAG | 4 cut(s) | 168, 341, 540, 711 |
| MaeII | ACGT | 1 cut(s) | 73 |
| MaeIII | GTNAC | 8 cut(s) | 246, 566, 615, 644, 656, 836, 872, 1001 |
| MalI | GATC | 5 cut(s) | 417, 425, 435, 1070, 1134 |
| MboI | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| MboII | GAAGA | 6 cut(s) | 135, 138, 141, 262, 572, 841 |
| MfeI | CAATTG | 1 cut(s) | 571 |
| MflI | RGATCY | 1 cut(s) | 423 |
| MhlI | GDGCHC | 7 cut(s) | 34, 113, 410, 591, 914, 1061, 1115 |
| MlsI | TGGCCA | 3 cut(s) | 531, 653, 902 |
| MluCI | AATT | 4 cut(s) | 356, 561, 571, 628 |
| MluNI | TGGCCA | 3 cut(s) | 531, 653, 902 |
| Mly113I | GGCGCC | 1 cut(s) | 264 |
| MmeI | TCCRAC | 1 cut(s) | 605 |
| Mox20I | TGGCCA | 3 cut(s) | 531, 653, 902 |
| MscI | TGGCCA | 3 cut(s) | 531, 653, 902 |
| MseI | TTAA | 2 cut(s) | 360, 749 |
| MslI | CAYNNNNRTG | 4 cut(s) | 573, 687, 1080, 1108 |
| Msp20I | TGGCCA | 3 cut(s) | 531, 653, 902 |
| MspCI | CTTAAG | 1 cut(s) | 748 |
| MspI | CCGG | 1 cut(s) | 585 |
| MunI | CAATTG | 1 cut(s) | 571 |
| Mva1269I | GAATGC | 1 cut(s) | 551 |
| MvaI | CCWGG | 9 cut(s) | 261, 286, 528, 642, 741, 842, 904, 1100, 1144 |
| MvnI | CGCG | 4 cut(s) | 189, 215, 847, 975 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 272, 516, 765, 981, 984, 990, 1033, 1050 |
| NarI | GGCGCC | 1 cut(s) | 264 |
| NciI | CCSGG | 2 cut(s) | 585, 586 |
| NdeI | CATATG | 2 cut(s) | 1038, 1105 |
| NdeII | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| NlaIII | CATG | 6 cut(s) | 367, 652, 880, 899, 1057, 1132 |
| NlaIV | GGNNCC | 7 cut(s) | 79, 165, 265, 383, 407, 1059, 1060 |
| NmeAIII | GCCGAG | 1 cut(s) | 521 |
| NmuCI | GTSAC | 6 cut(s) | 246, 566, 615, 644, 836, 1001 |
| NruI | TCGCGA | 1 cut(s) | 189 |
| NspI | RCATGY | 2 cut(s) | 880, 899 |
| OliI | CACNNNNGTG | 2 cut(s) | 573, 687 |
| PciI | ACATGT | 1 cut(s) | 876 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 424 |
| PctI | GAATGC | 1 cut(s) | 551 |
| PkrI | GCNGC | 6 cut(s) | 59, 62, 214, 727, 977, 986 |
| PluTI | GGCGCC | 1 cut(s) | 267 |
| Ppu21I | YACGTR | 1 cut(s) | 74 |
| PpuMI | RGGWCCY | 1 cut(s) | 164 |
| PscI | ACATGT | 1 cut(s) | 876 |
| Psp5II | RGGWCCY | 1 cut(s) | 164 |
| Psp6I | CCWGG | 9 cut(s) | 259, 284, 526, 640, 739, 840, 902, 1098, 1142 |
| PspEI | GGTNACC | 1 cut(s) | 836 |
| PspGI | CCWGG | 9 cut(s) | 259, 284, 526, 640, 739, 840, 902, 1098, 1142 |
| PspN4I | GGNNCC | 7 cut(s) | 79, 165, 265, 383, 407, 1059, 1060 |
| PspOMI | GGGCCC | 1 cut(s) | 1057 |
| PspPI | GGNCC | 4 cut(s) | 4, 164, 1057, 1058 |
| PspPPI | RGGWCCY | 1 cut(s) | 164 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 412, 444 |
| PstI | CTGCAG | 1 cut(s) | 106 |
| PstNI | CAGNNNCTG | 1 cut(s) | 660 |
| PsuI | RGATCY | 1 cut(s) | 423 |
| RruI | TCGCGA | 1 cut(s) | 189 |
| RsaI | GTAC | 2 cut(s) | 607, 1151 |
| RsaNI | GTAC | 2 cut(s) | 606, 1150 |
| RseI | CAYNNNNRTG | 4 cut(s) | 573, 687, 1080, 1108 |
| SalI | GTCGAC | 1 cut(s) | 791 |
| SaqAI | TTAA | 2 cut(s) | 360, 749 |
| SatI | GCNGC | 6 cut(s) | 58, 61, 213, 726, 976, 985 |
| Sau3AI | GATC | 5 cut(s) | 415, 423, 433, 1068, 1132 |
| Sau96I | GGNCC | 4 cut(s) | 4, 164, 1057, 1058 |
| SduI | GDGCHC | 7 cut(s) | 34, 113, 410, 591, 914, 1061, 1115 |
| SexAI | ACCWGGT | 1 cut(s) | 640 |
| SfaNI | GCATC | 3 cut(s) | 144, 442, 684 |
| SfcI | CTRYAG | 2 cut(s) | 102, 823 |
| SfoI | GGCGCC | 1 cut(s) | 265 |
| SinI | GGWCC | 2 cut(s) | 4, 164 |
| SmaI | CCCGGG | 1 cut(s) | 586 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 573, 687, 1080, 1108 |
| SmlI | CTYRAG | 1 cut(s) | 748 |
| SmoI | CTYRAG | 1 cut(s) | 748 |
| Sse9I | AATT | 4 cut(s) | 356, 561, 571, 628 |
| SspDI | GGCGCC | 1 cut(s) | 263 |
| SspMI | CTAG | 4 cut(s) | 168, 341, 540, 711 |
| StyI | CCWWGG | 1 cut(s) | 167 |
| TaaI | ACNGT | 4 cut(s) | 220, 707, 824, 1082 |
| TaiI | ACGT | 1 cut(s) | 76 |
| TaqI | TCGA | 2 cut(s) | 254, 792 |
| TaqII | GACCGA | 1 cut(s) | 21 |
| TasI | AATT | 4 cut(s) | 356, 561, 571, 628 |
| TauI | GCSGC | 5 cut(s) | 60, 63, 215, 978, 987 |
| Tru1I | TTAA | 2 cut(s) | 360, 749 |
| Tru9I | TTAA | 2 cut(s) | 360, 749 |
| TscAI | CASTG | 4 cut(s) | 303, 339, 727, 914 |
| TseFI | GTSAC | 6 cut(s) | 246, 566, 615, 644, 836, 1001 |
| TseI | GCWGC | 1 cut(s) | 725 |
| Tsp45I | GTSAC | 6 cut(s) | 246, 566, 615, 644, 836, 1001 |
| TspDTI | ATGAA | 3 cut(s) | 684, 876, 1117 |
| TspGWI | ACGGA | 1 cut(s) | 416 |
| TspMI | CCCGGG | 1 cut(s) | 584 |
| TspRI | CASTG | 4 cut(s) | 303, 339, 727, 914 |
| Vha464I | CTTAAG | 1 cut(s) | 748 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 164 |
| XapI | RAATTY | 1 cut(s) | 356 |
| XceI | RCATGY | 2 cut(s) | 880, 899 |
| XmaI | CCCGGG | 1 cut(s) | 584 |
| XmaJI | CCTAGG | 1 cut(s) | 167 |
| XmiI | GTMKAC | 1 cut(s) | 792 |
| XspI | CTAG | 4 cut(s) | 168, 341, 540, 711 |