Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002926

Physical Location & Seq

Genomic Coordinates Forward (+)

19835068 .. 19839882

Gene Structure 4815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG152400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCATTTGTGTTTCTGCTCCGCCGCCGCTTGCCCTTACGTGGTTCCAAAGCTCGCCGTGAAGCCTCTGCAGACTGCTCTGAAAAAAGAAGAAGAAGCATCTCGTTCTATTTCAGAGAGAAAGAGGGACCTAGGGTTCTTTCTGATTTTCGCGACTACCCGAAGCTTCTCTCCGCCGCGACAGTCCTCGCCCGCTTCTCCGCAACGCCGTCACCTTCGACGCCAGGCGCCTTCTTCGCTCTCTTTTCCAGGGAGGAGGCAGTGGTGGTTGTGGTGGTGTTTTTTTTCCTCAAATCAGTGGAGCTAGGTCATAATAAGAAATTTAACATGAGTTCAGACAGCAGGAGCCTAAGCAGGAGCAGGAGCAGGAGCCCTAAGGATCGTAAGATCCGTTCTGATCGCTTTTCCTATCGTGATGCACCTTACAGAAGAGATGGTCGTCGGGGTGGTGGTTTCAGCCGAGACAATCTCTGCAAGAACTGCAAAAGACCTGGCCATTTTGCTAGAGAATGCCCTAATGTTGCAATTTGTCACAATTGTGGTCTTCCCGGGCACATTGCTTCGGAGTGTACCACAAAGTCACTATGTTGGAATTGCCGTGAACCTGGTCACATGGCCAGTAACTGCCCGAATGAAGGCATCTGCCACACCTGTGGCAAGGCTGGACACCGTGCTAGAGACTGCACTGCTGCCCCAATGCCACCTGGGGACTTAAGGTTGTGCAACAACTGCTACAAGCAGGGCCATATTGCAGTTGACTGCACAAATGAGAAGGCATGCAACAACTGTAGGAAGACAGGTCACCTGGCGCGTGATTGCCCAAATGAACCCATCTGTAACATGTGCAATGTATCCGGGCATGTGGCCAGGCAGTGCCCCAGAGCCAATGTTTTGGCAGAGAGGGGAGGAGGTGGTGGTGGTGGTGGTGGTGGAGTTCGCGGCAGTAGCGGCGGTGGCTACCATCGTGACATTGTATGTAGGAACTGCCAGCAACTTGGGCATATGAGCAGGGATTGCATGGGCCCCTTGATGATCTGTCATAACTGTGGGGGGCGAGGACACCTGGCATATGAGTGCCCTTCTGGTAGGTTCATGGATCGCTACCCCAGGAGGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCHC zf-CCHC_3 zf-CCHC_4

Protein Analysis

383

Amino Acids

42.51

Weight (kDa)

9.75

Isoelectric Point (pI)

71.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCHC	PF00098	168 - 184	7.2e-06	Zinc knuckle
zf-CCHC	PF00098	207 - 222	4e-06	Zinc knuckle
zf-CCHC	PF00098	270 - 286	6.8e-06	Zinc knuckle
zf-CCHC	PF00098	336 - 350	1.6e-06	Zinc knuckle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75560 AT1G75560
fragaria_vesca	FvH4_2g10323 FvH4_2g10323 FvH4_7g21972
malus_domestica	MD00G1040200.v1.1 MD01G1124300.v1.1 MD10G1063900.v1.1
prunus_persica	Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.8G085500_v2.0.a1
pyrus_communis	pycom01g15080 pycom05g04680 pycom10g04940
rosa_chinensis	RchiOBHm_Chr1g0366331 RchiOBHm_Chr6g0267601
rosa_roxburghii	Rroxscaffold_4G00289990 Rroxscaffold_4G00290250 Rroxscaffold_7G00200570
rosa_rugosa	Rorug01G0329000 Rorug06G0033800
rosa_samantha	Rh1AG337200 Rh1BG298700 Rh1CG314000 Rh1DG330200 Rh6AG155500 Rh6BG156800 Rh6CG152400 Rh6DG142000
rosa_wichuraiana	Rw1G029890 Rw6G013360 Rw6G013510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	260
AccII	CGCG	4 cut(s)	186, 212, 844, 972
AclWI	GGATC	3 cut(s)	415, 420, 1137
AcoI	YGGCCR	3 cut(s)	526, 648, 897
AcsI	RAATTY	1 cut(s)	353
AcyI	GRCGYC	2 cut(s)	254, 261
AfaI	GTAC	2 cut(s)	604, 1148
AfiI	CCNNNNNNNGG	2 cut(s)	74, 668
AflII	CTTAAG	1 cut(s)	745
AflIII	ACRYGT	1 cut(s)	873
AjnI	CCWGG	9 cut(s)	256, 281, 523, 637, 736, 837, 899, 1095, 1139
AleI	CACNNNNGTG	2 cut(s)	570, 684
AloI	GAACNNNNNNTCC	2 cut(s)	153, 185
AluBI	AGCT	3 cut(s)	86, 199, 337
AluI	AGCT	3 cut(s)	86, 199, 337
Alw21I	GWGCWC	1 cut(s)	34
Alw26I	GTCTC	2 cut(s)	489, 705
AlwI	GGATC	3 cut(s)	415, 420, 1137
AlwNI	CAGNNNCTG	1 cut(s)	657
Ama87I	CYCGRG	1 cut(s)	581
AoxI	GGCC	5 cut(s)	526, 648, 775, 897, 1054
ApaI	GGGCCC	1 cut(s)	1058
ApeKI	GCWGC	1 cut(s)	722
ApoI	RAATTY	1 cut(s)	353
AspA2I	CCTAGG	1 cut(s)	164
AspLEI	GCGC	2 cut(s)	263, 844
AspS9I	GGNCC	5 cut(s)	4, 161, 775, 1054, 1055
AsuC2I	CCSGG	3 cut(s)	582, 583, 889
AsuHPI	GGTGA	2 cut(s)	237, 827
AvaI	CYCGRG	1 cut(s)	581
AvaII	GGWCC	2 cut(s)	4, 161
AvrII	CCTAGG	1 cut(s)	164
AxyI	CCTNAGG	2 cut(s)	24, 408
BaeGI	GKGCMC	4 cut(s)	588, 911, 1058, 1112
BalI	TGGCCA	3 cut(s)	528, 650, 899
BanI	GGYRCC	1 cut(s)	260
BanII	GRGCYC	2 cut(s)	407, 1058
BbsI	GAAGAC	2 cut(s)	569, 833
Bbv12I	GWGCWC	1 cut(s)	34
BbvI	GCAGC	1 cut(s)	709
BccI	CCATC	3 cut(s)	461, 872, 1002
BceAI	ACGGC	3 cut(s)	75, 226, 615
BciT130I	CCWGG	9 cut(s)	258, 283, 525, 639, 738, 839, 901, 1097, 1141
BciVI	GTATCC	1 cut(s)	895
BcnI	CCSGG	3 cut(s)	582, 583, 889
BcoDI	GTCTC	2 cut(s)	489, 705
BfaI	CTAG	4 cut(s)	165, 338, 537, 708
BfmI	CTRYAG	2 cut(s)	102, 820
BfoI	RGCGCY	1 cut(s)	264
BfrI	CTTAAG	1 cut(s)	745
BfuI	GTATCC	1 cut(s)	895
BisI	GCNGC	6 cut(s)	58, 61, 210, 723, 973, 982
BlnI	CCTAGG	1 cut(s)	164
BlsI	GCNGC	6 cut(s)	59, 62, 211, 724, 974, 983
Bme18I	GGWCC	2 cut(s)	4, 161
BmeT110I	CYCGRG	1 cut(s)	581
BmgT120I	GGNCC	5 cut(s)	4, 161, 775, 1054, 1055
BmiI	GGNNCC	7 cut(s)	79, 162, 262, 380, 404, 1056, 1057
BmsI	GCATC	3 cut(s)	141, 439, 681
BpiI	GAAGAC	2 cut(s)	569, 833
BplI	GAGNNNNNCTC	2 cut(s)	486, 518
Bpu10I	CCTNAGC	1 cut(s)	383
BpuMI	CCSGG	3 cut(s)	582, 583, 889
BsaAI	YACGTR	1 cut(s)	74
BsaHI	GRCGYC	2 cut(s)	254, 261
BsaJI	CCNNGG	5 cut(s)	164, 282, 581, 737, 1139
Bsc4I	CCNNNNNNNGG	2 cut(s)	74, 668
Bse1I	ACTGG	1 cut(s)	651
Bse21I	CCTNAGG	2 cut(s)	24, 408
Bse3DI	GCAATG	2 cut(s)	588, 886
BseBI	CCWGG	9 cut(s)	258, 283, 525, 639, 738, 839, 901, 1097, 1141
BseDI	CCNNGG	5 cut(s)	164, 282, 581, 737, 1139
BseLI	CCNNNNNNNGG	2 cut(s)	74, 668
BseMI	GCAATG	2 cut(s)	588, 886
BseMII	CTCAG	1 cut(s)	38
BseNI	ACTGG	1 cut(s)	651
BseRI	GAGGAG	2 cut(s)	302, 954
BseSI	GKGCMC	4 cut(s)	588, 911, 1058, 1112
BseXI	GCAGC	1 cut(s)	709
BsgI	GTGCAG	2 cut(s)	700, 778
Bsh1236I	CGCG	4 cut(s)	186, 212, 844, 972
BshFI	GGCC	5 cut(s)	528, 650, 777, 899, 1056
BshNI	GGYRCC	1 cut(s)	260
BsiHKAI	GWGCWC	1 cut(s)	34
BsiHKCI	CYCGRG	1 cut(s)	581
BsiSI	CCGG	2 cut(s)	582, 888
BslFI	GGGAC	2 cut(s)	174, 755
BslI	CCNNNNNNNGG	2 cut(s)	74, 668
BsmAI	GTCTC	2 cut(s)	489, 705
BsmFI	GGGAC	2 cut(s)	174, 755
BsmI	GAATGC	1 cut(s)	548
BsnI	GGCC	5 cut(s)	528, 650, 777, 899, 1056
BsoBI	CYCGRG	1 cut(s)	581
Bsp120I	GGGCCC	1 cut(s)	1054
Bsp1286I	GDGCHC	6 cut(s)	34, 407, 588, 911, 1058, 1112
Bsp143I	GATC	5 cut(s)	412, 420, 430, 1065, 1129
Bsp68I	TCGCGA	1 cut(s)	186
BspANI	GGCC	5 cut(s)	528, 650, 777, 899, 1056
BspCNI	CTCAG	1 cut(s)	37
BspFNI	CGCG	4 cut(s)	186, 212, 844, 972
BspLI	GGNNCC	7 cut(s)	79, 162, 262, 380, 404, 1056, 1057
BspMAI	CTGCAG	1 cut(s)	106
BspPI	GGATC	3 cut(s)	415, 420, 1137
BspT107I	GGYRCC	1 cut(s)	260
BspTI	CTTAAG	1 cut(s)	745
BsrDI	GCAATG	2 cut(s)	588, 886
BsrI	ACTGG	1 cut(s)	651
BssECI	CCNNGG	5 cut(s)	164, 282, 581, 737, 1139
BssMI	GATC	5 cut(s)	412, 420, 430, 1065, 1129
BssNI	GRCGYC	2 cut(s)	254, 261
BssT1I	CCWWGG	1 cut(s)	164
Bst2UI	CCWGG	9 cut(s)	258, 283, 525, 639, 738, 839, 901, 1097, 1141
Bst4CI	ACNGT	4 cut(s)	217, 704, 821, 1079
Bst6I	CTCTTC	1 cut(s)	457
BstACI	GRCGYC	2 cut(s)	254, 261
BstAFI	CTTAAG	1 cut(s)	745
BstAPI	GCANNNNNTGC	3 cut(s)	513, 762, 1047
BstBAI	YACGTR	1 cut(s)	74
BstC8I	GCNNGC	5 cut(s)	65, 88, 226, 811, 1022
BstDEI	CTNAG	3 cut(s)	24, 383, 408
BstEII	GGTNACC	1 cut(s)	833
BstFNI	CGCG	4 cut(s)	186, 212, 844, 972
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	2 cut(s)	263, 844
BstKTI	GATC	5 cut(s)	415, 423, 433, 1068, 1132
BstMAI	GTCTC	2 cut(s)	489, 705
BstMBI	GATC	5 cut(s)	412, 420, 430, 1065, 1129
BstMWI	GCNNNNNNNGC	8 cut(s)	269, 513, 762, 978, 981, 987, 1030, 1047
BstNI	CCWGG	9 cut(s)	258, 283, 525, 639, 738, 839, 901, 1097, 1141
BstNSI	RCATGY	3 cut(s)	813, 877, 896
BstPI	GGTNACC	1 cut(s)	833
BstSFI	CTRYAG	2 cut(s)	102, 820
BstSLI	GKGCMC	4 cut(s)	588, 911, 1058, 1112
BstUI	CGCG	4 cut(s)	186, 212, 844, 972
BstV1I	GCAGC	1 cut(s)	709
BstV2I	GAAGAC	2 cut(s)	569, 833
BstX2I	RGATCY	1 cut(s)	420
BstXI	CCANNNNNNTGG	3 cut(s)	686, 925, 1028
BstYI	RGATCY	1 cut(s)	420
Bsu36I	CCTNAGG	2 cut(s)	24, 408
BsuI	GTATCC	1 cut(s)	895
BsuRI	GGCC	5 cut(s)	528, 650, 777, 899, 1056
BtsI	GCAGTG	3 cut(s)	300, 717, 911
BtsIMutI	CAGTG	4 cut(s)	300, 336, 717, 911
BtuMI	TCGCGA	1 cut(s)	186
Cac8I	GCNNGC	5 cut(s)	65, 88, 226, 811, 1022
CaiI	CAGNNNCTG	1 cut(s)	657
CfoI	GCGC	2 cut(s)	263, 844
Cfr13I	GGNCC	5 cut(s)	4, 161, 775, 1054, 1055
Cfr9I	CCCGGG	1 cut(s)	581
CseI	GACGC	1 cut(s)	262
CsiI	ACCWGGT	1 cut(s)	637
Csp6I	GTAC	2 cut(s)	603, 1147
CviAII	CATG	7 cut(s)	361, 646, 810, 874, 893, 1051, 1126
CviQI	GTAC	2 cut(s)	603, 1147
DdeI	CTNAG	3 cut(s)	24, 383, 408
DinI	GGCGCC	1 cut(s)	262
DpnI	GATC	5 cut(s)	414, 422, 432, 1067, 1131
DpnII	GATC	5 cut(s)	412, 420, 430, 1065, 1129
EaeI	YGGCCR	3 cut(s)	526, 648, 897
Eam1104I	CTCTTC	1 cut(s)	457
EarI	CTCTTC	1 cut(s)	457
EciI	GGCGGA	2 cut(s)	44, 196
Eco130I	CCWWGG	1 cut(s)	164
Eco24I	GRGCYC	2 cut(s)	407, 1058
Eco47I	GGWCC	2 cut(s)	4, 161
Eco81I	CCTNAGG	2 cut(s)	24, 408
Eco88I	CYCGRG	1 cut(s)	581
Eco91I	GGTNACC	1 cut(s)	833
EcoO109I	RGGNCCY	2 cut(s)	161, 1055
EcoO65I	GGTNACC	1 cut(s)	833
EcoRII	CCWGG	9 cut(s)	256, 281, 523, 637, 736, 837, 899, 1095, 1139
EcoT14I	CCWWGG	1 cut(s)	164
EcoT38I	GRGCYC	2 cut(s)	407, 1058
EgeI	GGCGCC	1 cut(s)	262
EheI	GGCGCC	1 cut(s)	262
ErhI	CCWWGG	1 cut(s)	164
FaeI	CATG	7 cut(s)	364, 649, 813, 877, 896, 1054, 1129
FaqI	GGGAC	2 cut(s)	174, 755
FatI	CATG	7 cut(s)	360, 645, 809, 873, 892, 1050, 1125
FauI	CCCGC	1 cut(s)	233
FauNDI	CATATG	2 cut(s)	1035, 1102
Fnu4HI	GCNGC	6 cut(s)	58, 61, 210, 723, 973, 982
FriOI	GRGCYC	2 cut(s)	407, 1058
Fsp4HI	GCNGC	6 cut(s)	58, 61, 210, 723, 973, 982
FspBI	CTAG	4 cut(s)	165, 338, 537, 708
GlaI	GCGC	2 cut(s)	262, 843
GluI	GCNGC	6 cut(s)	58, 61, 210, 723, 973, 982
HaeII	RGCGCY	1 cut(s)	264
HaeIII	GGCC	5 cut(s)	528, 650, 777, 899, 1056
HapII	CCGG	2 cut(s)	582, 888
HgaI	GACGC	1 cut(s)	262
HhaI	GCGC	2 cut(s)	263, 844
Hin1I	GRCGYC	2 cut(s)	254, 261
Hin1II	CATG	7 cut(s)	364, 649, 813, 877, 896, 1054, 1129
Hin6I	GCGC	2 cut(s)	261, 842
HinP1I	GCGC	2 cut(s)	261, 842
HincII	GTYRAC	1 cut(s)	790
HindII	GTYRAC	1 cut(s)	790
HindIII	AAGCTT	1 cut(s)	197
HpaII	CCGG	2 cut(s)	582, 888
HphI	GGTGA	2 cut(s)	237, 827
Hpy166II	GTNNAC	3 cut(s)	603, 635, 790
Hpy188I	TCNGA	6 cut(s)	115, 149, 178, 370, 430, 598
Hpy188III	TCNNGA	3 cut(s)	185, 446, 998
Hpy8I	GTNNAC	3 cut(s)	603, 635, 790
Hpy99I	CGWCG	2 cut(s)	256, 477
HpyAV	CCTTC	5 cut(s)	258, 274, 662, 799, 1122
HpyCH4III	ACNGT	4 cut(s)	217, 704, 821, 1079
HpyCH4IV	ACGT	1 cut(s)	73
HpyF10VI	GCNNNNNNNGC	8 cut(s)	269, 513, 762, 978, 981, 987, 1030, 1047
HpyF3I	CTNAG	3 cut(s)	24, 383, 408
HpySE526I	ACGT	1 cut(s)	73
Hsp92I	GRCGYC	2 cut(s)	254, 261
Hsp92II	CATG	7 cut(s)	364, 649, 813, 877, 896, 1054, 1129
HspAI	GCGC	2 cut(s)	261, 842
KasI	GGCGCC	1 cut(s)	260
Kzo9I	GATC	5 cut(s)	412, 420, 430, 1065, 1129
LmnI	GCTCC	7 cut(s)	29, 57, 334, 378, 390, 396, 402
Lsp1109I	GCAGC	1 cut(s)	709
LweI	GCATC	3 cut(s)	141, 439, 681
MabI	ACCWGGT	1 cut(s)	637
MaeI	CTAG	4 cut(s)	165, 338, 537, 708
MaeII	ACGT	1 cut(s)	73
MaeIII	GTNAC	8 cut(s)	243, 563, 612, 641, 653, 833, 869, 998
MalI	GATC	5 cut(s)	414, 422, 432, 1067, 1131
MboI	GATC	5 cut(s)	412, 420, 430, 1065, 1129
MboII	GAAGA	6 cut(s)	135, 138, 259, 474, 569, 838
MfeI	CAATTG	1 cut(s)	568
MflI	RGATCY	1 cut(s)	420
MhlI	GDGCHC	6 cut(s)	34, 407, 588, 911, 1058, 1112
MlsI	TGGCCA	3 cut(s)	528, 650, 899
MluCI	AATT	4 cut(s)	353, 558, 568, 625
MluNI	TGGCCA	3 cut(s)	528, 650, 899
Mly113I	GGCGCC	1 cut(s)	261
MmeI	TCCRAC	1 cut(s)	602
Mox20I	TGGCCA	3 cut(s)	528, 650, 899
MscI	TGGCCA	3 cut(s)	528, 650, 899
MseI	TTAA	2 cut(s)	357, 746
MslI	CAYNNNNRTG	4 cut(s)	570, 684, 1077, 1105
Msp20I	TGGCCA	3 cut(s)	528, 650, 899
MspCI	CTTAAG	1 cut(s)	745
MspI	CCGG	2 cut(s)	582, 888
MunI	CAATTG	1 cut(s)	568
Mva1269I	GAATGC	1 cut(s)	548
MvaI	CCWGG	9 cut(s)	258, 283, 525, 639, 738, 839, 901, 1097, 1141
MvnI	CGCG	4 cut(s)	186, 212, 844, 972
MwoI	GCNNNNNNNGC	8 cut(s)	269, 513, 762, 978, 981, 987, 1030, 1047
NarI	GGCGCC	1 cut(s)	261
NciI	CCSGG	3 cut(s)	582, 583, 889
NdeI	CATATG	2 cut(s)	1035, 1102
NdeII	GATC	5 cut(s)	412, 420, 430, 1065, 1129
NlaIII	CATG	7 cut(s)	364, 649, 813, 877, 896, 1054, 1129
NlaIV	GGNNCC	7 cut(s)	79, 162, 262, 380, 404, 1056, 1057
NmeAIII	GCCGAG	1 cut(s)	518
NmuCI	GTSAC	6 cut(s)	243, 563, 612, 641, 833, 998
NruI	TCGCGA	1 cut(s)	186
NspI	RCATGY	3 cut(s)	813, 877, 896
OliI	CACNNNNGTG	2 cut(s)	570, 684
PaeI	GCATGC	1 cut(s)	813
PciI	ACATGT	1 cut(s)	873
PcsI	WCGNNNNNNNCGW	1 cut(s)	421
PctI	GAATGC	1 cut(s)	548
PkrI	GCNGC	6 cut(s)	59, 62, 211, 724, 974, 983
PluTI	GGCGCC	1 cut(s)	264
Ppu21I	YACGTR	1 cut(s)	74
PpuMI	RGGWCCY	1 cut(s)	161
PscI	ACATGT	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	161
Psp6I	CCWGG	9 cut(s)	256, 281, 523, 637, 736, 837, 899, 1095, 1139
PspEI	GGTNACC	1 cut(s)	833
PspGI	CCWGG	9 cut(s)	256, 281, 523, 637, 736, 837, 899, 1095, 1139
PspN4I	GGNNCC	7 cut(s)	79, 162, 262, 380, 404, 1056, 1057
PspOMI	GGGCCC	1 cut(s)	1054
PspPI	GGNCC	5 cut(s)	4, 161, 775, 1054, 1055
PspPPI	RGGWCCY	1 cut(s)	161
PsrI	GAACNNNNNNTAC	2 cut(s)	409, 441
PstI	CTGCAG	1 cut(s)	106
PstNI	CAGNNNCTG	1 cut(s)	657
PsuI	RGATCY	1 cut(s)	420
RruI	TCGCGA	1 cut(s)	186
RsaI	GTAC	2 cut(s)	604, 1148
RsaNI	GTAC	2 cut(s)	603, 1147
RseI	CAYNNNNRTG	4 cut(s)	570, 684, 1077, 1105
SaqAI	TTAA	2 cut(s)	357, 746
SatI	GCNGC	6 cut(s)	58, 61, 210, 723, 973, 982
Sau3AI	GATC	5 cut(s)	412, 420, 430, 1065, 1129
Sau96I	GGNCC	5 cut(s)	4, 161, 775, 1054, 1055
SduI	GDGCHC	6 cut(s)	34, 407, 588, 911, 1058, 1112
SexAI	ACCWGGT	1 cut(s)	637
SfaNI	GCATC	3 cut(s)	141, 439, 681
SfcI	CTRYAG	2 cut(s)	102, 820
SfoI	GGCGCC	1 cut(s)	262
SinI	GGWCC	2 cut(s)	4, 161
SmaI	CCCGGG	1 cut(s)	583
SmiMI	CAYNNNNRTG	4 cut(s)	570, 684, 1077, 1105
SmlI	CTYRAG	1 cut(s)	745
SmoI	CTYRAG	1 cut(s)	745
SphI	GCATGC	1 cut(s)	813
Sse9I	AATT	4 cut(s)	353, 558, 568, 625
SspDI	GGCGCC	1 cut(s)	260
SspMI	CTAG	4 cut(s)	165, 338, 537, 708
StyI	CCWWGG	1 cut(s)	164
TaaI	ACNGT	4 cut(s)	217, 704, 821, 1079
TaiI	ACGT	1 cut(s)	76
TaqI	TCGA	1 cut(s)	251
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	4 cut(s)	353, 558, 568, 625
TauI	GCSGC	5 cut(s)	60, 63, 212, 975, 984
Tru1I	TTAA	2 cut(s)	357, 746
Tru9I	TTAA	2 cut(s)	357, 746
TscAI	CASTG	4 cut(s)	300, 336, 724, 911
TseFI	GTSAC	6 cut(s)	243, 563, 612, 641, 833, 998
TseI	GCWGC	1 cut(s)	722
Tsp45I	GTSAC	6 cut(s)	243, 563, 612, 641, 833, 998
TspDTI	ATGAA	3 cut(s)	681, 873, 1114
TspGWI	ACGGA	1 cut(s)	413
TspMI	CCCGGG	1 cut(s)	581
TspRI	CASTG	4 cut(s)	300, 336, 724, 911
Vha464I	CTTAAG	1 cut(s)	745
VpaK11BI	GGWCC	2 cut(s)	4, 161
XapI	RAATTY	1 cut(s)	353
XceI	RCATGY	3 cut(s)	813, 877, 896
XmaI	CCCGGG	1 cut(s)	581
XmaJI	CCTAGG	1 cut(s)	164
XspI	CTAG	4 cut(s)	165, 338, 537, 708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.