Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002926

Physical Location & Seq

Genomic Coordinates Forward (+)

25294017 .. 25298768

Gene Structure 4752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG156800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCATTTGTGTTTCTGCTCCGCCGCCGCTTGCCCTTACGTGGTTCCAAAGCTCGCCGTGAAGCCTCTGCAGACTGCTCTGAAAAAAGAAGAAGCATCTTGTTCTATTTCAGAGGTGAGAGGCGCGACGAGGGTAATATTGTCAATTACTCACAGAAAGAGGGACCTAGGGTTCTTTCTGATTTTCGCGACTACCCGAAGCTTCTCTCCGCCGCGACAGTCCTCGCCCGCTTCTCCGCAACGCCGTCACCTTCGACGCCAGGCGCCTTCTTCGCTCTCTTTTCCAGGGAGGAGGCAGTGGTGGTTGTGGTGGTGTTTTTTTTCCTCAAATCAGTGGAGCTAGGTCATAATAAGAAATTTAACATGAGTTCAGACAGCAGGAGCCTAAGCAGGAGCAGGAGCAGGAGCCCTAAGGATCGTAAGATCCGTTCTGATCGCTTTTCCTATCGTGATGCACCTTACAGGAGAGATGGTCGTCGGGGTGGTGGTTTCAGCCGAGACAATCTCTGCAAGAACTGCAAAAGACCTGGCCATTTTGCTAGAGAATGCCCTAATGTTGCAATTTGTCACAATTGTGGTCTTCCCGGGCACATTGCTTCGGAGTGTACCACAAAGTCACTATGTTGGAATTGCCGTGAACCTGGTCACATGGCCAGTAACTGCCCGAATGAAGGCATCTGCCACACCTGTGGCAAGGCTGGACACCGTGCTAGAGACTGCACTGCTGCCCCAATGCCACCTGGGGACTTAAGGTTGTGCAACAACTGCTACAAGCAGGGTCATATTGCAGTCGACTGCACAAATGAGAAGGCATGCAACAACTGTAGGAAGACAGGTCACCTGGCGCGTGATTGCCCAAATGAACCCATCTGTAACATGTGCAATGTATCTGGGCATGTGGCCAGGCAGTGCCCCAGAGCCAATGTTTTGGCAGAGAGGGGAGGAGGTGGTGGTGGAGTTCGCGGCAGTAGCGGCGGTGGCTACCATCGTGACATTGTATGTAGGAACTGCCAGCAACTTGGGCATATGAGCAGGGATTGCATGGGCCCCTTGATGATCTGTCATAACTGTGGGGGGCGAGGACACCTGGCATATGAGTGCCCTTCTGGTAGGCTCATGGATCGCTACCCCAGGAGGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCHC zf-CCHC_3 zf-CCHC_4

Protein Analysis

391

Amino Acids

43.6

Weight (kDa)

9.69

Isoelectric Point (pI)

70.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCHC	PF00098	180 - 196	7.4e-06	Zinc knuckle
zf-CCHC	PF00098	219 - 234	4.1e-06	Zinc knuckle
zf-CCHC	PF00098	282 - 298	6.9e-06	Zinc knuckle
zf-CCHC	PF00098	344 - 358	1.6e-06	Zinc knuckle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75560 AT1G75560
fragaria_vesca	FvH4_2g10323 FvH4_2g10323 FvH4_7g21972
malus_domestica	MD00G1040200.v1.1 MD01G1124300.v1.1 MD10G1063900.v1.1
prunus_persica	Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.2G231800_v2.0.a1 Prupe.8G085500_v2.0.a1
pyrus_communis	pycom01g15080 pycom05g04680 pycom10g04940
rosa_chinensis	RchiOBHm_Chr1g0366331 RchiOBHm_Chr6g0267601
rosa_roxburghii	Rroxscaffold_4G00289990 Rroxscaffold_4G00290250 Rroxscaffold_7G00200570
rosa_rugosa	Rorug01G0329000 Rorug06G0033800
rosa_samantha	Rh1AG337200 Rh1BG298700 Rh1CG314000 Rh1DG330200 Rh6AG155500 Rh6BG156800 Rh6CG152400 Rh6DG142000
rosa_wichuraiana	Rw1G029890 Rw6G013360 Rw6G013510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	296
AccI	GTMKAC	1 cut(s)	825
AccII	CGCG	5 cut(s)	159, 222, 248, 880, 996
AclWI	GGATC	3 cut(s)	451, 456, 1161
AcoI	YGGCCR	3 cut(s)	562, 684, 933
AcsI	RAATTY	1 cut(s)	389
AcyI	GRCGYC	2 cut(s)	290, 297
AfaI	GTAC	2 cut(s)	640, 1172
AfiI	CCNNNNNNNGG	2 cut(s)	74, 704
AflII	CTTAAG	1 cut(s)	781
AflIII	ACRYGT	1 cut(s)	909
AjnI	CCWGG	9 cut(s)	292, 317, 559, 673, 772, 873, 935, 1119, 1163
AleI	CACNNNNGTG	2 cut(s)	606, 720
AloI	GAACNNNNNNTCC	2 cut(s)	189, 221
AluBI	AGCT	3 cut(s)	86, 235, 373
AluI	AGCT	3 cut(s)	86, 235, 373
Alw21I	GWGCWC	1 cut(s)	34
Alw26I	GTCTC	2 cut(s)	525, 741
AlwI	GGATC	3 cut(s)	451, 456, 1161
AlwNI	CAGNNNCTG	1 cut(s)	693
Ama87I	CYCGRG	1 cut(s)	617
AoxI	GGCC	4 cut(s)	562, 684, 933, 1078
ApaI	GGGCCC	1 cut(s)	1082
ApeKI	GCWGC	1 cut(s)	758
ApoI	RAATTY	1 cut(s)	389
AspA2I	CCTAGG	1 cut(s)	200
AspLEI	GCGC	3 cut(s)	159, 299, 880
AspS9I	GGNCC	4 cut(s)	4, 197, 1078, 1079
AsuC2I	CCSGG	2 cut(s)	618, 619
AsuHPI	GGTGA	3 cut(s)	161, 273, 863
AvaI	CYCGRG	1 cut(s)	617
AvaII	GGWCC	2 cut(s)	4, 197
AvrII	CCTAGG	1 cut(s)	200
AxyI	CCTNAGG	2 cut(s)	24, 444
BaeGI	GKGCMC	4 cut(s)	624, 947, 1082, 1136
BalI	TGGCCA	3 cut(s)	564, 686, 935
BanI	GGYRCC	1 cut(s)	296
BanII	GRGCYC	2 cut(s)	443, 1082
BbsI	GAAGAC	2 cut(s)	605, 869
Bbv12I	GWGCWC	1 cut(s)	34
BbvI	GCAGC	1 cut(s)	745
BccI	CCATC	3 cut(s)	497, 908, 1026
BceAI	ACGGC	3 cut(s)	75, 262, 651
BciT130I	CCWGG	9 cut(s)	294, 319, 561, 675, 774, 875, 937, 1121, 1165
BcnI	CCSGG	2 cut(s)	618, 619
BcoDI	GTCTC	2 cut(s)	525, 741
BfaI	CTAG	4 cut(s)	201, 374, 573, 744
BfmI	CTRYAG	2 cut(s)	102, 856
BfoI	RGCGCY	1 cut(s)	300
BfrI	CTTAAG	1 cut(s)	781
BisI	GCNGC	6 cut(s)	58, 61, 246, 759, 997, 1006
BlnI	CCTAGG	1 cut(s)	200
BlsI	GCNGC	6 cut(s)	59, 62, 247, 760, 998, 1007
Bme18I	GGWCC	2 cut(s)	4, 197
BmeT110I	CYCGRG	1 cut(s)	617
BmgT120I	GGNCC	4 cut(s)	4, 197, 1078, 1079
BmiI	GGNNCC	7 cut(s)	79, 198, 298, 416, 440, 1080, 1081
BmsI	GCATC	3 cut(s)	138, 475, 717
BpiI	GAAGAC	2 cut(s)	605, 869
BplI	GAGNNNNNCTC	2 cut(s)	522, 554
Bpu10I	CCTNAGC	1 cut(s)	419
BpuMI	CCSGG	2 cut(s)	618, 619
BsaAI	YACGTR	1 cut(s)	74
BsaHI	GRCGYC	2 cut(s)	290, 297
BsaJI	CCNNGG	5 cut(s)	200, 318, 617, 773, 1163
BsaXI	ACNNNNNCTCC	2 cut(s)	490, 520
Bsc4I	CCNNNNNNNGG	2 cut(s)	74, 704
Bse1I	ACTGG	1 cut(s)	687
Bse21I	CCTNAGG	2 cut(s)	24, 444
Bse3DI	GCAATG	2 cut(s)	624, 922
BseBI	CCWGG	9 cut(s)	294, 319, 561, 675, 774, 875, 937, 1121, 1165
BseDI	CCNNGG	5 cut(s)	200, 318, 617, 773, 1163
BseLI	CCNNNNNNNGG	2 cut(s)	74, 704
BseMI	GCAATG	2 cut(s)	624, 922
BseMII	CTCAG	1 cut(s)	38
BseNI	ACTGG	1 cut(s)	687
BseRI	GAGGAG	2 cut(s)	338, 990
BseSI	GKGCMC	4 cut(s)	624, 947, 1082, 1136
BseXI	GCAGC	1 cut(s)	745
BsgI	GTGCAG	2 cut(s)	736, 814
Bsh1236I	CGCG	5 cut(s)	159, 222, 248, 880, 996
BshFI	GGCC	4 cut(s)	564, 686, 935, 1080
BshNI	GGYRCC	1 cut(s)	296
BsiHKAI	GWGCWC	1 cut(s)	34
BsiHKCI	CYCGRG	1 cut(s)	617
BsiSI	CCGG	1 cut(s)	618
BslFI	GGGAC	2 cut(s)	210, 791
BslI	CCNNNNNNNGG	2 cut(s)	74, 704
BsmAI	GTCTC	2 cut(s)	525, 741
BsmFI	GGGAC	2 cut(s)	210, 791
BsmI	GAATGC	1 cut(s)	584
BsnI	GGCC	4 cut(s)	564, 686, 935, 1080
BsoBI	CYCGRG	1 cut(s)	617
Bsp120I	GGGCCC	1 cut(s)	1078
Bsp1286I	GDGCHC	6 cut(s)	34, 443, 624, 947, 1082, 1136
Bsp143I	GATC	5 cut(s)	448, 456, 466, 1089, 1153
Bsp68I	TCGCGA	1 cut(s)	222
BspANI	GGCC	4 cut(s)	564, 686, 935, 1080
BspCNI	CTCAG	1 cut(s)	37
BspFNI	CGCG	5 cut(s)	159, 222, 248, 880, 996
BspLI	GGNNCC	7 cut(s)	79, 198, 298, 416, 440, 1080, 1081
BspMAI	CTGCAG	1 cut(s)	106
BspPI	GGATC	3 cut(s)	451, 456, 1161
BspT107I	GGYRCC	1 cut(s)	296
BspTI	CTTAAG	1 cut(s)	781
BsrDI	GCAATG	2 cut(s)	624, 922
BsrI	ACTGG	1 cut(s)	687
BssECI	CCNNGG	5 cut(s)	200, 318, 617, 773, 1163
BssMI	GATC	5 cut(s)	448, 456, 466, 1089, 1153
BssNI	GRCGYC	2 cut(s)	290, 297
BssT1I	CCWWGG	1 cut(s)	200
Bst2UI	CCWGG	9 cut(s)	294, 319, 561, 675, 774, 875, 937, 1121, 1165
Bst4CI	ACNGT	4 cut(s)	253, 740, 857, 1103
BstACI	GRCGYC	2 cut(s)	290, 297
BstAFI	CTTAAG	1 cut(s)	781
BstAPI	GCANNNNNTGC	3 cut(s)	549, 798, 1071
BstBAI	YACGTR	1 cut(s)	74
BstC8I	GCNNGC	5 cut(s)	65, 88, 262, 847, 1046
BstDEI	CTNAG	3 cut(s)	24, 419, 444
BstEII	GGTNACC	1 cut(s)	869
BstFNI	CGCG	5 cut(s)	159, 222, 248, 880, 996
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	3 cut(s)	159, 299, 880
BstKTI	GATC	5 cut(s)	451, 459, 469, 1092, 1156
BstMAI	GTCTC	2 cut(s)	525, 741
BstMBI	GATC	5 cut(s)	448, 456, 466, 1089, 1153
BstMWI	GCNNNNNNNGC	8 cut(s)	305, 549, 798, 1002, 1005, 1011, 1054, 1071
BstNI	CCWGG	9 cut(s)	294, 319, 561, 675, 774, 875, 937, 1121, 1165
BstNSI	RCATGY	3 cut(s)	849, 913, 932
BstPI	GGTNACC	1 cut(s)	869
BstSFI	CTRYAG	2 cut(s)	102, 856
BstSLI	GKGCMC	4 cut(s)	624, 947, 1082, 1136
BstUI	CGCG	5 cut(s)	159, 222, 248, 880, 996
BstV1I	GCAGC	1 cut(s)	745
BstV2I	GAAGAC	2 cut(s)	605, 869
BstX2I	RGATCY	1 cut(s)	456
BstXI	CCANNNNNNTGG	3 cut(s)	722, 961, 1052
BstYI	RGATCY	1 cut(s)	456
Bsu36I	CCTNAGG	2 cut(s)	24, 444
BsuRI	GGCC	4 cut(s)	564, 686, 935, 1080
BtsI	GCAGTG	3 cut(s)	336, 753, 947
BtsIMutI	CAGTG	4 cut(s)	336, 372, 753, 947
BtuMI	TCGCGA	1 cut(s)	222
Cac8I	GCNNGC	5 cut(s)	65, 88, 262, 847, 1046
CaiI	CAGNNNCTG	1 cut(s)	693
CfoI	GCGC	3 cut(s)	159, 299, 880
Cfr13I	GGNCC	4 cut(s)	4, 197, 1078, 1079
Cfr9I	CCCGGG	1 cut(s)	617
CseI	GACGC	1 cut(s)	298
CsiI	ACCWGGT	1 cut(s)	673
Csp6I	GTAC	2 cut(s)	639, 1171
CviAII	CATG	7 cut(s)	397, 682, 846, 910, 929, 1075, 1150
CviQI	GTAC	2 cut(s)	639, 1171
DdeI	CTNAG	3 cut(s)	24, 419, 444
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	5 cut(s)	450, 458, 468, 1091, 1155
DpnII	GATC	5 cut(s)	448, 456, 466, 1089, 1153
EaeI	YGGCCR	3 cut(s)	562, 684, 933
EciI	GGCGGA	2 cut(s)	44, 232
Eco130I	CCWWGG	1 cut(s)	200
Eco24I	GRGCYC	2 cut(s)	443, 1082
Eco47I	GGWCC	2 cut(s)	4, 197
Eco81I	CCTNAGG	2 cut(s)	24, 444
Eco88I	CYCGRG	1 cut(s)	617
Eco91I	GGTNACC	1 cut(s)	869
EcoO109I	RGGNCCY	2 cut(s)	197, 1079
EcoO65I	GGTNACC	1 cut(s)	869
EcoRII	CCWGG	9 cut(s)	292, 317, 559, 673, 772, 873, 935, 1119, 1163
EcoT14I	CCWWGG	1 cut(s)	200
EcoT38I	GRGCYC	2 cut(s)	443, 1082
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
ErhI	CCWWGG	1 cut(s)	200
FaeI	CATG	7 cut(s)	400, 685, 849, 913, 932, 1078, 1153
FaqI	GGGAC	2 cut(s)	210, 791
FatI	CATG	7 cut(s)	396, 681, 845, 909, 928, 1074, 1149
FauI	CCCGC	1 cut(s)	269
FauNDI	CATATG	2 cut(s)	1059, 1126
FblI	GTMKAC	1 cut(s)	825
Fnu4HI	GCNGC	6 cut(s)	58, 61, 246, 759, 997, 1006
FriOI	GRGCYC	2 cut(s)	443, 1082
Fsp4HI	GCNGC	6 cut(s)	58, 61, 246, 759, 997, 1006
FspBI	CTAG	4 cut(s)	201, 374, 573, 744
GlaI	GCGC	3 cut(s)	158, 298, 879
GluI	GCNGC	6 cut(s)	58, 61, 246, 759, 997, 1006
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	4 cut(s)	564, 686, 935, 1080
HapII	CCGG	1 cut(s)	618
HgaI	GACGC	1 cut(s)	298
HhaI	GCGC	3 cut(s)	159, 299, 880
Hin1I	GRCGYC	2 cut(s)	290, 297
Hin1II	CATG	7 cut(s)	400, 685, 849, 913, 932, 1078, 1153
Hin6I	GCGC	3 cut(s)	157, 297, 878
HinP1I	GCGC	3 cut(s)	157, 297, 878
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	1 cut(s)	233
HpaII	CCGG	1 cut(s)	618
HphI	GGTGA	3 cut(s)	161, 273, 863
Hpy166II	GTNNAC	3 cut(s)	639, 671, 826
Hpy188I	TCNGA	6 cut(s)	115, 146, 214, 406, 466, 634
Hpy188III	TCNNGA	3 cut(s)	221, 482, 1022
Hpy8I	GTNNAC	3 cut(s)	639, 671, 826
Hpy99I	CGWCG	3 cut(s)	164, 292, 513
HpyAV	CCTTC	5 cut(s)	294, 310, 698, 835, 1146
HpyCH4III	ACNGT	4 cut(s)	253, 740, 857, 1103
HpyCH4IV	ACGT	1 cut(s)	73
HpyF10VI	GCNNNNNNNGC	8 cut(s)	305, 549, 798, 1002, 1005, 1011, 1054, 1071
HpyF3I	CTNAG	3 cut(s)	24, 419, 444
HpySE526I	ACGT	1 cut(s)	73
Hsp92I	GRCGYC	2 cut(s)	290, 297
Hsp92II	CATG	7 cut(s)	400, 685, 849, 913, 932, 1078, 1153
HspAI	GCGC	3 cut(s)	157, 297, 878
KasI	GGCGCC	1 cut(s)	296
Kzo9I	GATC	5 cut(s)	448, 456, 466, 1089, 1153
LmnI	GCTCC	7 cut(s)	29, 57, 370, 414, 426, 432, 438
Lsp1109I	GCAGC	1 cut(s)	745
LweI	GCATC	3 cut(s)	138, 475, 717
MabI	ACCWGGT	1 cut(s)	673
MaeI	CTAG	4 cut(s)	201, 374, 573, 744
MaeII	ACGT	1 cut(s)	73
MaeIII	GTNAC	8 cut(s)	279, 599, 648, 677, 689, 869, 905, 1022
MalI	GATC	5 cut(s)	450, 458, 468, 1091, 1155
MboI	GATC	5 cut(s)	448, 456, 466, 1089, 1153
MboII	GAAGA	4 cut(s)	135, 295, 605, 874
MfeI	CAATTG	1 cut(s)	604
MflI	RGATCY	1 cut(s)	456
MhlI	GDGCHC	6 cut(s)	34, 443, 624, 947, 1082, 1136
MlsI	TGGCCA	3 cut(s)	564, 686, 935
MluCI	AATT	5 cut(s)	178, 389, 594, 604, 661
MluNI	TGGCCA	3 cut(s)	564, 686, 935
Mly113I	GGCGCC	1 cut(s)	297
MmeI	TCCRAC	1 cut(s)	638
Mox20I	TGGCCA	3 cut(s)	564, 686, 935
MscI	TGGCCA	3 cut(s)	564, 686, 935
MseI	TTAA	2 cut(s)	393, 782
MslI	CAYNNNNRTG	4 cut(s)	606, 720, 1101, 1129
Msp20I	TGGCCA	3 cut(s)	564, 686, 935
MspCI	CTTAAG	1 cut(s)	781
MspI	CCGG	1 cut(s)	618
MunI	CAATTG	1 cut(s)	604
Mva1269I	GAATGC	1 cut(s)	584
MvaI	CCWGG	9 cut(s)	294, 319, 561, 675, 774, 875, 937, 1121, 1165
MvnI	CGCG	5 cut(s)	159, 222, 248, 880, 996
MwoI	GCNNNNNNNGC	8 cut(s)	305, 549, 798, 1002, 1005, 1011, 1054, 1071
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	2 cut(s)	618, 619
NdeI	CATATG	2 cut(s)	1059, 1126
NdeII	GATC	5 cut(s)	448, 456, 466, 1089, 1153
NlaIII	CATG	7 cut(s)	400, 685, 849, 913, 932, 1078, 1153
NlaIV	GGNNCC	7 cut(s)	79, 198, 298, 416, 440, 1080, 1081
NmeAIII	GCCGAG	1 cut(s)	554
NmuCI	GTSAC	6 cut(s)	279, 599, 648, 677, 869, 1022
NruI	TCGCGA	1 cut(s)	222
NspI	RCATGY	3 cut(s)	849, 913, 932
OliI	CACNNNNGTG	2 cut(s)	606, 720
PaeI	GCATGC	1 cut(s)	849
PciI	ACATGT	1 cut(s)	909
PcsI	WCGNNNNNNNCGW	1 cut(s)	457
PctI	GAATGC	1 cut(s)	584
PkrI	GCNGC	6 cut(s)	59, 62, 247, 760, 998, 1007
PluTI	GGCGCC	1 cut(s)	300
Ppu21I	YACGTR	1 cut(s)	74
PpuMI	RGGWCCY	1 cut(s)	197
PscI	ACATGT	1 cut(s)	909
Psp5II	RGGWCCY	1 cut(s)	197
Psp6I	CCWGG	9 cut(s)	292, 317, 559, 673, 772, 873, 935, 1119, 1163
PspEI	GGTNACC	1 cut(s)	869
PspGI	CCWGG	9 cut(s)	292, 317, 559, 673, 772, 873, 935, 1119, 1163
PspN4I	GGNNCC	7 cut(s)	79, 198, 298, 416, 440, 1080, 1081
PspOMI	GGGCCC	1 cut(s)	1078
PspPI	GGNCC	4 cut(s)	4, 197, 1078, 1079
PspPPI	RGGWCCY	1 cut(s)	197
PsrI	GAACNNNNNNTAC	2 cut(s)	445, 477
PstI	CTGCAG	1 cut(s)	106
PstNI	CAGNNNCTG	1 cut(s)	693
PsuI	RGATCY	1 cut(s)	456
RruI	TCGCGA	1 cut(s)	222
RsaI	GTAC	2 cut(s)	640, 1172
RsaNI	GTAC	2 cut(s)	639, 1171
RseI	CAYNNNNRTG	4 cut(s)	606, 720, 1101, 1129
SalI	GTCGAC	1 cut(s)	824
SaqAI	TTAA	2 cut(s)	393, 782
SatI	GCNGC	6 cut(s)	58, 61, 246, 759, 997, 1006
Sau3AI	GATC	5 cut(s)	448, 456, 466, 1089, 1153
Sau96I	GGNCC	4 cut(s)	4, 197, 1078, 1079
SduI	GDGCHC	6 cut(s)	34, 443, 624, 947, 1082, 1136
SexAI	ACCWGGT	1 cut(s)	673
SfaNI	GCATC	3 cut(s)	138, 475, 717
SfcI	CTRYAG	2 cut(s)	102, 856
SfoI	GGCGCC	1 cut(s)	298
SinI	GGWCC	2 cut(s)	4, 197
SmaI	CCCGGG	1 cut(s)	619
SmiMI	CAYNNNNRTG	4 cut(s)	606, 720, 1101, 1129
SmlI	CTYRAG	1 cut(s)	781
SmoI	CTYRAG	1 cut(s)	781
SphI	GCATGC	1 cut(s)	849
Sse9I	AATT	5 cut(s)	178, 389, 594, 604, 661
SspDI	GGCGCC	1 cut(s)	296
SspI	AATATT	1 cut(s)	172
SspMI	CTAG	4 cut(s)	201, 374, 573, 744
StyI	CCWWGG	1 cut(s)	200
TaaI	ACNGT	4 cut(s)	253, 740, 857, 1103
TaiI	ACGT	1 cut(s)	76
TaqI	TCGA	2 cut(s)	287, 825
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	5 cut(s)	178, 389, 594, 604, 661
TauI	GCSGC	5 cut(s)	60, 63, 248, 999, 1008
Tru1I	TTAA	2 cut(s)	393, 782
Tru9I	TTAA	2 cut(s)	393, 782
TscAI	CASTG	4 cut(s)	336, 372, 760, 947
TseFI	GTSAC	6 cut(s)	279, 599, 648, 677, 869, 1022
TseI	GCWGC	1 cut(s)	758
Tsp45I	GTSAC	6 cut(s)	279, 599, 648, 677, 869, 1022
TspDTI	ATGAA	2 cut(s)	717, 909
TspGWI	ACGGA	1 cut(s)	449
TspMI	CCCGGG	1 cut(s)	617
TspRI	CASTG	4 cut(s)	336, 372, 760, 947
Vha464I	CTTAAG	1 cut(s)	781
VpaK11BI	GGWCC	2 cut(s)	4, 197
XapI	RAATTY	1 cut(s)	389
XceI	RCATGY	3 cut(s)	849, 913, 932
XmaI	CCCGGG	1 cut(s)	617
XmaJI	CCTAGG	1 cut(s)	200
XmiI	GTMKAC	1 cut(s)	825
XspI	CTAG	4 cut(s)	201, 374, 573, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.