Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007781

Physical Location & Seq

Genomic Coordinates Reverse (-)

59835346 .. 59841996

Gene Structure 6651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG368700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGAAGGTCCATCCAATCCCCAAGAGGCGCAACATCTCCATCCAGTACCATTCAAGAAGCCCACTCTCTGAAGCCCAGGCCCTCCTCGGCCTCACCCACAAGAAGCTCCGCCGCCTCCCCCATGTCTTCAGCCGCGTCCTCGAGCTCCCTTTCCGCTCCGACGCCGACGTCCTCATCGAGGAGAACCCCGACTGCTTCCGCTTCGTCGCCGAAACCGAGAGCTTCGGCCACGACGTCAGGGCCCACACCGTCGAAATCCACCCCGGGGTGACCAAGATTGTCGTCAGGGAAAGAGGGTCCGCGGCGGAGCTGACGTTGGACGAGCTGGAGCTGGACATGTGGAGGTTCCGCCTGCCGGAGTCGACCCGGCCGGAGCTGGCCAGGGCGGTTTTTGTCGACGGGGAGCTCATTGTGACGGTCTTGGCTATTGTATGGGAATGTAATTTTCGAAAGGTGACAGATAAGGCTTTACTGCATGCAGTATTGAGTGGCTCCATAAATAATAAAGATGGCAGAGTCAAGGATGATGGGTATATATACATGGTACTTGAATATGGAGAAATTGATTTGGCTCACATGCTGTCCCAGAAGTGGAAGGAAATGGATGGGTCGAATCAGACCATAGATGAGAACTGGTTACGATTCTACTGGCAGCAAATTCTTCTGGCAGTCAGCACCATACATGAAGAGCGAATTGTGCACTCTGACTTGAAGCCAGCTAATTTCCTGCTTGTCAGAGGCTCTCTTAAGCTGATTGATTTTGGGATTGCTAAAGCTATAATGAGTGATACAACCAACATCCAACGGGATTCTCAGGTGGGTACACTAAGTTACATGTCTCCAGAGGCATTCATGTGCAATGAGACTGATGCAGATGGAAACACTATCAAGTGTGGTCGGCCATCAGACATTTGGTCCCTTGGTTGCATCCTTTATCAGATGGTATACGGGAGGACCCCGTTTGCAGACTACAAGACCTTCTGGGCCAAGTTCAAAGTTATAACAGATCCTAACCATCAAATTTCATATGAACCAGTCCCTAACCCTTGGCTTCTGGACCTCATGAGAAAGTGCCTTGCCTGGGACCGCAATGAAAGATGGAGGATCCCTGAACTACTTCAGCACCCTTTTCTTGTTCCCCCAGTTCCAACCCAGCCATCTTCTCATGATCACAGCTGTAAATTGCTTCGACTTATTGGCCAAAATTGTACCAATGATTCTGAAGCGTCGAAGCTTGTTTGTCAGCTTAAACAACTGCTTGAAGACCCTTTGCCATCCACAACGTCTCAGTTATTAACATCGCGTGACCAACAATGTACATTGCTCTCCCAAGTGTCAAAACTCAAAAGTTTGCCTTCAGCTCCAGGAACACTTTCAGAGAGACAAATAGGTGATGGTCCAAGCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004672 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005813 GO:0005815 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0015630 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0071704 GO:0098687 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Pkinase

Protein Analysis

469

Amino Acids

53.47

Weight (kDa)

6.33

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	170 - 374	8.4e-20	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	173 - 378	3.7e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22530 AT4G14830
fragaria_vesca	FvH4_4g16300 FvH4_4g16300
malus_domestica	MD13G1194500.v1.1 MD16G1195400.v1.1
prunus_persica	Prupe.1G015400_v2.0.a1
pyrus_communis	pycom05g06220 pycom13g16690 pycom16g16460
rosa_chinensis	RchiOBHm_Chr4g0415991
rosa_laevigata	RLG00000008025
rosa_multiflora	Rmu_sc0005415.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359840
rosa_rugosa	Rorug02G0491700 Rorug03G0025900 Rorug04G0137200 Rorug06G0075100
rosa_samantha	Rh4AG199700 Rh4BG197200 Rh4CG210700 Rh5BG016200 Rh6BG368700
rosa_wichuraiana	Rw4G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1001
AasI	GACNNNNNNGTC	1 cut(s)	167
AatII	GACGTC	2 cut(s)	171, 237
AccBSI	CCGCTC	1 cut(s)	156
AccI	GTMKAC	3 cut(s)	362, 396, 945
AccII	CGCG	3 cut(s)	135, 302, 1303
AclWI	GGATC	3 cut(s)	1001, 1099, 1112
AcoI	YGGCCR	5 cut(s)	226, 368, 378, 899, 1198
AcsI	RAATTY	2 cut(s)	657, 1020
AcuI	CTGAAG	5 cut(s)	90, 112, 1103, 1242, 1341
AcyI	GRCGYC	3 cut(s)	162, 168, 234
AfaI	GTAC	5 cut(s)	47, 546, 823, 1210, 1318
AfiI	CCNNNNNNNGG	5 cut(s)	178, 265, 355, 591, 1081
AflII	CTTAAG	1 cut(s)	746
AflIII	ACRYGT	2 cut(s)	336, 834
AgsI	TTSAA	5 cut(s)	54, 551, 712, 994, 1262
AhdI	GACNNNNNGTC	1 cut(s)	913
AjnI	CCWGG	4 cut(s)	75, 380, 1079, 1363
Alw21I	GWGCWC	3 cut(s)	147, 408, 702
Alw26I	GTCTC	4 cut(s)	843, 857, 1290, 1375
Alw44I	GTGCAC	1 cut(s)	698
AlwI	GGATC	3 cut(s)	1001, 1099, 1112
Ama87I	CYCGRG	2 cut(s)	140, 263
AoxI	GGCC	9 cut(s)	78, 88, 226, 240, 368, 378, 899, 984, 1198
ApaI	GGGCCC	1 cut(s)	244
ApaLI	GTGCAC	1 cut(s)	698
ApeKI	GCWGC	1 cut(s)	652
ApoI	RAATTY	2 cut(s)	657, 1020
Asp700I	GAANNNNTTC	2 cut(s)	1116, 1372
AspLEI	GCGC	1 cut(s)	30
AsuC2I	CCSGG	3 cut(s)	264, 265, 367
AsuHPI	GGTGA	4 cut(s)	85, 280, 466, 1403
AsuII	TTCGAA	1 cut(s)	448
AvaI	CYCGRG	2 cut(s)	140, 263
AvaII	GGWCC	7 cut(s)	7, 297, 915, 954, 1057, 1084, 1397
BaeGI	GKGCMC	2 cut(s)	244, 702
BalI	TGGCCA	2 cut(s)	380, 1200
BamHI	GGATCC	1 cut(s)	1104
BanII	GRGCYC	3 cut(s)	147, 244, 408
BbsI	GAAGAC	2 cut(s)	118, 1269
Bbv12I	GWGCWC	3 cut(s)	147, 408, 702
BbvI	GCAGC	1 cut(s)	664
BciT130I	CCWGG	4 cut(s)	77, 382, 1081, 1365
BclI	TGATCA	1 cut(s)	1168
BcnI	CCSGG	3 cut(s)	264, 265, 367
BcoDI	GTCTC	4 cut(s)	843, 857, 1290, 1375
BfrI	CTTAAG	1 cut(s)	746
BisI	GCNGC	4 cut(s)	112, 133, 303, 653
BlsI	GCNGC	4 cut(s)	113, 134, 304, 654
Bme1390I	CCNGG	7 cut(s)	77, 264, 265, 367, 382, 1081, 1365
Bme18I	GGWCC	7 cut(s)	7, 297, 915, 954, 1057, 1084, 1397
BmeRI	GACNNNNNGTC	1 cut(s)	913
BmeT110I	CYCGRG	2 cut(s)	140, 263
BmiI	GGNNCC	8 cut(s)	242, 298, 347, 493, 917, 956, 1085, 1106
BmrFI	CCNGG	7 cut(s)	77, 264, 265, 367, 382, 1081, 1365
BmrI	ACTGGG	1 cut(s)	1136
BmsI	GCATC	2 cut(s)	859, 936
BmuI	ACTGGG	1 cut(s)	1136
BpiI	GAAGAC	2 cut(s)	118, 1269
BpmI	CTGGAG	3 cut(s)	347, 825, 1347
Bpu14I	TTCGAA	1 cut(s)	448
BpuMI	CCSGG	3 cut(s)	264, 265, 367
BsaHI	GRCGYC	3 cut(s)	162, 168, 234
BsaXI	ACNNNNNCTCC	2 cut(s)	299, 329
Bsc4I	CCNNNNNNNGG	5 cut(s)	178, 265, 355, 591, 1081
Bse1I	ACTGG	5 cut(s)	43, 638, 653, 1034, 1142
Bse3DI	GCAATG	3 cut(s)	865, 1096, 1319
BseBI	CCWGG	4 cut(s)	77, 382, 1081, 1365
BseGI	GGATG	7 cut(s)	10, 39, 529, 610, 798, 927, 1274
BseLI	CCNNNNNNNGG	5 cut(s)	178, 265, 355, 591, 1081
BseMI	GCAATG	3 cut(s)	865, 1096, 1319
BseMII	CTCAG	2 cut(s)	827, 1301
BseNI	ACTGG	5 cut(s)	43, 638, 653, 1034, 1142
BseRI	GAGGAG	2 cut(s)	74, 194
BseSI	GKGCMC	2 cut(s)	244, 702
BseX3I	CGGCCG	1 cut(s)	368
BseXI	GCAGC	1 cut(s)	664
BseYI	CCCAGC	1 cut(s)	1152
Bsh1236I	CGCG	3 cut(s)	135, 302, 1303
Bsh1285I	CGRYCG	1 cut(s)	371
BshFI	GGCC	9 cut(s)	80, 90, 228, 242, 370, 380, 901, 986, 1200
BsiEI	CGRYCG	1 cut(s)	371
BsiHKAI	GWGCWC	3 cut(s)	147, 408, 702
BsiHKCI	CYCGRG	2 cut(s)	140, 263
BsiSI	CCGG	4 cut(s)	264, 356, 367, 371
BslFI	GGGAC	4 cut(s)	568, 901, 1022, 1097
BslI	CCNNNNNNNGG	5 cut(s)	178, 265, 355, 591, 1081
BsmAI	GTCTC	4 cut(s)	843, 857, 1290, 1375
BsmBI	CGTCTC	1 cut(s)	1290
BsmFI	GGGAC	4 cut(s)	568, 901, 1022, 1097
BsmI	GAATGC	1 cut(s)	848
BsnI	GGCC	9 cut(s)	80, 90, 228, 242, 370, 380, 901, 986, 1200
BsoBI	CYCGRG	2 cut(s)	140, 263
Bsp119I	TTCGAA	1 cut(s)	448
Bsp120I	GGGCCC	1 cut(s)	240
Bsp1286I	GDGCHC	4 cut(s)	147, 244, 408, 702
Bsp1407I	TGTACA	1 cut(s)	1316
Bsp143I	GATC	3 cut(s)	1006, 1104, 1168
BspANI	GGCC	9 cut(s)	80, 90, 228, 242, 370, 380, 901, 986, 1200
BspCNI	CTCAG	2 cut(s)	826, 1300
BspFNI	CGCG	3 cut(s)	135, 302, 1303
BspHI	TCATGA	2 cut(s)	1062, 1165
BspLI	GGNNCC	8 cut(s)	242, 298, 347, 493, 917, 956, 1085, 1106
BspPI	GGATC	3 cut(s)	1001, 1099, 1112
BspQI	GCTCTTC	1 cut(s)	681
BspT104I	TTCGAA	1 cut(s)	448
BspTI	CTTAAG	1 cut(s)	746
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	3 cut(s)	865, 1096, 1319
BsrGI	TGTACA	1 cut(s)	1316
BsrI	ACTGG	5 cut(s)	43, 638, 653, 1034, 1142
BssMI	GATC	3 cut(s)	1006, 1104, 1168
BssNAI	GTATAC	1 cut(s)	946
BssNI	GRCGYC	3 cut(s)	162, 168, 234
BssT1I	CCWWGG	2 cut(s)	919, 1046
Bst1107I	GTATAC	1 cut(s)	946
Bst2UI	CCWGG	4 cut(s)	77, 382, 1081, 1365
Bst4CI	ACNGT	2 cut(s)	250, 418
Bst6I	CTCTTC	1 cut(s)	681
BstACI	GRCGYC	3 cut(s)	162, 168, 234
BstAFI	CTTAAG	1 cut(s)	746
BstAUI	TGTACA	1 cut(s)	1316
BstBI	TTCGAA	1 cut(s)	448
BstC8I	GCNNGC	4 cut(s)	353, 378, 477, 717
BstDEI	CTNAG	3 cut(s)	813, 827, 1287
BstDSI	CCRYGG	1 cut(s)	300
BstEII	GGTNACC	1 cut(s)	268
BstENI	CCTNNNNNAGG	1 cut(s)	176
BstF5I	GGATG	7 cut(s)	10, 39, 529, 610, 798, 927, 1274
BstFNI	CGCG	3 cut(s)	135, 302, 1303
BstHHI	GCGC	1 cut(s)	30
BstKTI	GATC	3 cut(s)	1009, 1107, 1171
BstMAI	GTCTC	4 cut(s)	843, 857, 1290, 1375
BstMBI	GATC	3 cut(s)	1006, 1104, 1168
BstMCI	CGRYCG	1 cut(s)	371
BstMWI	GCNNNNNNNGC	1 cut(s)	697
BstNI	CCWGG	4 cut(s)	77, 382, 1081, 1365
BstNSI	RCATGY	4 cut(s)	340, 479, 580, 838
BstPI	GGTNACC	1 cut(s)	268
BstSCI	CCNGG	7 cut(s)	75, 262, 263, 365, 380, 1079, 1363
BstSLI	GKGCMC	2 cut(s)	244, 702
BstUI	CGCG	3 cut(s)	135, 302, 1303
BstV1I	GCAGC	1 cut(s)	664
BstV2I	GAAGAC	2 cut(s)	118, 1269
BstX2I	RGATCY	2 cut(s)	1006, 1104
BstYI	RGATCY	2 cut(s)	1006, 1104
BstZ17I	GTATAC	1 cut(s)	946
BstZI	CGGCCG	1 cut(s)	368
BsuRI	GGCC	9 cut(s)	80, 90, 228, 242, 370, 380, 901, 986, 1200
BtgI	CCRYGG	1 cut(s)	300
BtgZI	GCGATG	1 cut(s)	1284
BtsCI	GGATG	7 cut(s)	10, 39, 529, 610, 798, 927, 1274
Cac8I	GCNNGC	4 cut(s)	353, 378, 477, 717
CciI	TCATGA	2 cut(s)	1062, 1165
CfoI	GCGC	1 cut(s)	30
Cfr42I	CCGCGG	1 cut(s)	303
Cfr9I	CCCGGG	1 cut(s)	263
CseI	GACGC	3 cut(s)	124, 170, 1215
Csp6I	GTAC	5 cut(s)	46, 545, 822, 1209, 1317
CviQI	GTAC	5 cut(s)	46, 545, 822, 1209, 1317
DdeI	CTNAG	3 cut(s)	813, 827, 1287
DpnI	GATC	3 cut(s)	1008, 1106, 1170
DpnII	GATC	3 cut(s)	1006, 1104, 1168
DrdI	GACNNNNNNGTC	1 cut(s)	167
DriI	GACNNNNNGTC	1 cut(s)	913
DseDI	GACNNNNNNGTC	1 cut(s)	167
EaeI	YGGCCR	5 cut(s)	226, 368, 378, 899, 1198
EagI	CGGCCG	1 cut(s)	368
Eam1104I	CTCTTC	1 cut(s)	681
Eam1105I	GACNNNNNGTC	1 cut(s)	913
EarI	CTCTTC	1 cut(s)	681
EciI	GGCGGA	3 cut(s)	98, 320, 338
Ecl136II	GAGCTC	2 cut(s)	145, 406
EclXI	CGGCCG	1 cut(s)	368
Eco130I	CCWWGG	2 cut(s)	919, 1046
Eco24I	GRGCYC	3 cut(s)	147, 244, 408
Eco47I	GGWCC	7 cut(s)	7, 297, 915, 954, 1057, 1084, 1397
Eco52I	CGGCCG	1 cut(s)	368
Eco53kI	GAGCTC	2 cut(s)	145, 406
Eco57I	CTGAAG	5 cut(s)	90, 112, 1103, 1242, 1341
Eco88I	CYCGRG	2 cut(s)	140, 263
Eco91I	GGTNACC	1 cut(s)	268
EcoICRI	GAGCTC	2 cut(s)	145, 406
EcoNI	CCTNNNNNAGG	1 cut(s)	176
EcoO109I	RGGNCCY	3 cut(s)	79, 240, 954
EcoO65I	GGTNACC	1 cut(s)	268
EcoRII	CCWGG	4 cut(s)	75, 380, 1079, 1363
EcoT14I	CCWWGG	2 cut(s)	919, 1046
EcoT38I	GRGCYC	3 cut(s)	147, 244, 408
ErhI	CCWWGG	2 cut(s)	919, 1046
Esp3I	CGTCTC	1 cut(s)	1290
FalI	AAGNNNNNCTT	2 cut(s)	1339, 1371
FaqI	GGGAC	4 cut(s)	568, 901, 1022, 1097
FauNDI	CATATG	1 cut(s)	1027
FbaI	TGATCA	1 cut(s)	1168
FblI	GTMKAC	3 cut(s)	362, 396, 945
Fnu4HI	GCNGC	4 cut(s)	112, 133, 303, 653
FokI	GGATG	6 cut(s)	26, 536, 617, 785, 914, 1261
FriOI	GRGCYC	3 cut(s)	147, 244, 408
Fsp4HI	GCNGC	4 cut(s)	112, 133, 303, 653
GlaI	GCGC	1 cut(s)	29
GluI	GCNGC	4 cut(s)	112, 133, 303, 653
GsaI	CCCAGC	1 cut(s)	1156
GsuI	CTGGAG	3 cut(s)	347, 825, 1347
HaeIII	GGCC	9 cut(s)	80, 90, 228, 242, 370, 380, 901, 986, 1200
HapII	CCGG	4 cut(s)	264, 356, 367, 371
HgaI	GACGC	3 cut(s)	124, 170, 1215
HhaI	GCGC	1 cut(s)	30
Hin1I	GRCGYC	3 cut(s)	162, 168, 234
Hin6I	GCGC	1 cut(s)	28
HinP1I	GCGC	1 cut(s)	28
HincII	GTYRAC	2 cut(s)	363, 397
HindII	GTYRAC	2 cut(s)	363, 397
HindIII	AAGCTT	1 cut(s)	1232
HinfI	GANTC	6 cut(s)	359, 516, 613, 642, 809, 1217
HpaII	CCGG	4 cut(s)	264, 356, 367, 371
HphI	GGTGA	4 cut(s)	85, 280, 466, 1403
Hpy166II	GTNNAC	5 cut(s)	363, 397, 700, 824, 946
Hpy188I	TCNGA	9 cut(s)	70, 160, 618, 706, 737, 907, 939, 1222, 1378
Hpy188III	TCNNGA	5 cut(s)	54, 842, 1055, 1063, 1166
Hpy8I	GTNNAC	5 cut(s)	363, 397, 700, 824, 946
Hpy99I	CGWCG	7 cut(s)	164, 170, 209, 236, 254, 401, 1231
HpyAV	CCTTC	3 cut(s)	589, 988, 1365
HpyCH4III	ACNGT	2 cut(s)	250, 418
HpyCH4IV	ACGT	4 cut(s)	168, 234, 314, 1283
HpyCH4V	TGCA	7 cut(s)	475, 479, 700, 858, 872, 927, 965
HpyF10VI	GCNNNNNNNGC	1 cut(s)	697
HpyF3I	CTNAG	3 cut(s)	813, 827, 1287
HpySE526I	ACGT	4 cut(s)	168, 234, 314, 1283
Hsp92I	GRCGYC	3 cut(s)	162, 168, 234
HspAI	GCGC	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	1168
KspI	CCGCGG	1 cut(s)	303
Kzo9I	GATC	3 cut(s)	1006, 1104, 1168
LguI	GCTCTTC	1 cut(s)	681
LmnI	GCTCC	9 cut(s)	111, 150, 161, 307, 328, 373, 403, 497, 1366
Lsp1109I	GCAGC	1 cut(s)	664
LweI	GCATC	2 cut(s)	859, 936
MaeII	ACGT	4 cut(s)	168, 234, 314, 1283
MaeIII	GTNAC	6 cut(s)	268, 412, 454, 636, 830, 1304
MalI	GATC	3 cut(s)	1008, 1106, 1170
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	3 cut(s)	1006, 1104, 1168
MboII	GAAGA	5 cut(s)	118, 653, 698, 1152, 1274
MflI	RGATCY	2 cut(s)	1006, 1104
MhlI	GDGCHC	4 cut(s)	147, 244, 408, 702
MlsI	TGGCCA	2 cut(s)	380, 1200
MluCI	AATT	8 cut(s)	442, 561, 657, 693, 721, 1020, 1181, 1204
MluNI	TGGCCA	2 cut(s)	380, 1200
MlyI	GAGTC	2 cut(s)	368, 525
MmeI	TCCRAC	4 cut(s)	183, 297, 826, 1172
Mox20I	TGGCCA	2 cut(s)	380, 1200
MroXI	GAANNNNTTC	2 cut(s)	1116, 1372
MscI	TGGCCA	2 cut(s)	380, 1200
MseI	TTAA	3 cut(s)	747, 1248, 1295
MslI	CAYNNNNRTG	1 cut(s)	853
Msp20I	TGGCCA	2 cut(s)	380, 1200
MspA1I	CMGCKG	2 cut(s)	302, 1176
MspCI	CTTAAG	1 cut(s)	746
MspI	CCGG	4 cut(s)	264, 356, 367, 371
MspR9I	CCNGG	7 cut(s)	77, 264, 265, 367, 382, 1081, 1365
Mva1269I	GAATGC	1 cut(s)	848
MvaI	CCWGG	4 cut(s)	77, 382, 1081, 1365
MvnI	CGCG	3 cut(s)	135, 302, 1303
MwoI	GCNNNNNNNGC	1 cut(s)	697
NciI	CCSGG	3 cut(s)	264, 265, 367
NdeI	CATATG	1 cut(s)	1027
NdeII	GATC	3 cut(s)	1006, 1104, 1168
NlaIV	GGNNCC	8 cut(s)	242, 298, 347, 493, 917, 956, 1085, 1106
NmeAIII	GCCGAG	1 cut(s)	66
NmuCI	GTSAC	4 cut(s)	268, 412, 454, 1304
NspI	RCATGY	4 cut(s)	340, 479, 580, 838
NspV	TTCGAA	1 cut(s)	448
PaeI	GCATGC	1 cut(s)	479
PaeR7I	CTCGAG	1 cut(s)	140
PagI	TCATGA	2 cut(s)	1062, 1165
PciI	ACATGT	2 cut(s)	336, 834
PciSI	GCTCTTC	1 cut(s)	681
PcsI	WCGNNNNNNNCGW	3 cut(s)	174, 213, 231
PctI	GAATGC	1 cut(s)	848
PdmI	GAANNNNTTC	2 cut(s)	1116, 1372
PfeI	GAWTC	4 cut(s)	613, 642, 809, 1217
PfoI	TCCNGGA	1 cut(s)	1363
PkrI	GCNGC	4 cut(s)	113, 134, 304, 654
PleI	GAGTC	2 cut(s)	367, 524
PpsI	GAGTC	2 cut(s)	367, 524
PpuMI	RGGWCCY	1 cut(s)	954
PscI	ACATGT	2 cut(s)	336, 834
PsiI	TTATAA	1 cut(s)	1001
Psp124BI	GAGCTC	2 cut(s)	147, 408
Psp5II	RGGWCCY	1 cut(s)	954
Psp6I	CCWGG	4 cut(s)	75, 380, 1079, 1363
PspEI	GGTNACC	1 cut(s)	268
PspFI	CCCAGC	1 cut(s)	1152
PspGI	CCWGG	4 cut(s)	75, 380, 1079, 1363
PspN4I	GGNNCC	8 cut(s)	242, 298, 347, 493, 917, 956, 1085, 1106
PspOMI	GGGCCC	1 cut(s)	240
PspPPI	RGGWCCY	1 cut(s)	954
PspXI	VCTCGAGB	1 cut(s)	140
PsuI	RGATCY	2 cut(s)	1006, 1104
PvuII	CAGCTG	1 cut(s)	1176
RsaI	GTAC	5 cut(s)	47, 546, 823, 1210, 1318
RsaNI	GTAC	5 cut(s)	46, 545, 822, 1209, 1317
RseI	CAYNNNNRTG	1 cut(s)	853
SacI	GAGCTC	2 cut(s)	147, 408
SacII	CCGCGG	1 cut(s)	303
SalI	GTCGAC	2 cut(s)	361, 395
SapI	GCTCTTC	1 cut(s)	681
SaqAI	TTAA	3 cut(s)	747, 1248, 1295
SatI	GCNGC	4 cut(s)	112, 133, 303, 653
Sau3AI	GATC	3 cut(s)	1006, 1104, 1168
SchI	GAGTC	2 cut(s)	368, 525
ScrFI	CCNGG	7 cut(s)	77, 264, 265, 367, 382, 1081, 1365
SduI	GDGCHC	4 cut(s)	147, 244, 408, 702
SfaNI	GCATC	2 cut(s)	859, 936
Sfr274I	CTCGAG	1 cut(s)	140
Sfr303I	CCGCGG	1 cut(s)	303
SfuI	TTCGAA	1 cut(s)	448
SgrBI	CCGCGG	1 cut(s)	303
SinI	GGWCC	7 cut(s)	7, 297, 915, 954, 1057, 1084, 1397
SlaI	CTCGAG	1 cut(s)	140
SmaI	CCCGGG	1 cut(s)	265
SmiMI	CAYNNNNRTG	1 cut(s)	853
SmlI	CTYRAG	2 cut(s)	140, 746
SmoI	CTYRAG	2 cut(s)	140, 746
SphI	GCATGC	1 cut(s)	479
Sse9I	AATT	8 cut(s)	442, 561, 657, 693, 721, 1020, 1181, 1204
SstI	GAGCTC	2 cut(s)	147, 408
StyD4I	CCNGG	7 cut(s)	75, 262, 263, 365, 380, 1079, 1363
StyI	CCWWGG	2 cut(s)	919, 1046
TaaI	ACNGT	2 cut(s)	250, 418
TaiI	ACGT	4 cut(s)	171, 237, 317, 1286
TaqI	TCGA	9 cut(s)	141, 177, 252, 362, 396, 448, 611, 1189, 1229
TasI	AATT	8 cut(s)	442, 561, 657, 693, 721, 1020, 1181, 1204
TatI	WGTACW	1 cut(s)	1316
TauI	GCSGC	3 cut(s)	114, 135, 305
TfiI	GAWTC	4 cut(s)	613, 642, 809, 1217
Tru1I	TTAA	3 cut(s)	747, 1248, 1295
Tru9I	TTAA	3 cut(s)	747, 1248, 1295
TseFI	GTSAC	4 cut(s)	268, 412, 454, 1304
TseI	GCWGC	1 cut(s)	652
Tsp45I	GTSAC	4 cut(s)	268, 412, 454, 1304
TspDTI	ATGAA	6 cut(s)	17, 699, 841, 1014, 1044, 1107
TspMI	CCCGGG	1 cut(s)	263
Vha464I	CTTAAG	1 cut(s)	746
VneI	GTGCAC	1 cut(s)	698
VpaK11BI	GGWCC	7 cut(s)	7, 297, 915, 954, 1057, 1084, 1397
XagI	CCTNNNNNAGG	1 cut(s)	176
XapI	RAATTY	2 cut(s)	657, 1020
XceI	RCATGY	4 cut(s)	340, 479, 580, 838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	909
XhoI	CTCGAG	1 cut(s)	140
XmaI	CCCGGG	1 cut(s)	263
XmiI	GTMKAC	3 cut(s)	362, 396, 945
XmnI	GAANNNNTTC	2 cut(s)	1116, 1372
ZraI	GACGTC	2 cut(s)	169, 235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.