No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122091 RchiOBHm_Chr5g0058611 |
| rosa_laevigata | RLG00000000205 RLG00000003782 RLG00000017045 RLG00000017949 RLG00000019524 RLG00000025887 RLG00000026633 RLG00000030624 |
| rosa_multiflora | Rmu_sc0002258.1_g000003 Rmu_sc0005564.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00399590 Rroxscaffold_6G00422990 |
| rosa_rugosa | Rorug02G0365600 Rorug05G0530100 Rorug07G0081400 |
| rosa_samantha | Rh2BG641400 Rh2DG652300 Rh4AG117200 Rh4AG296500 Rh4CG017700 Rh5AG418800 Rh5BG435000 Rh6BG370400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 53 |
| AcoI | YGGCCR | 1 cut(s) | 18 |
| AcuI | CTGAAG | 2 cut(s) | 78, 231 |
| AfaI | GTAC | 2 cut(s) | 241, 266 |
| AluBI | AGCT | 1 cut(s) | 11 |
| AluI | AGCT | 1 cut(s) | 11 |
| AoxI | GGCC | 3 cut(s) | 18, 113, 166 |
| AspS9I | GGNCC | 1 cut(s) | 113 |
| BanII | GRGCYC | 1 cut(s) | 137 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BceAI | ACGGC | 1 cut(s) | 33 |
| BfaI | CTAG | 1 cut(s) | 298 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 1 cut(s) | 113 |
| BmiI | GGNNCC | 1 cut(s) | 136 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| Bse1I | ACTGG | 1 cut(s) | 274 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseNI | ACTGG | 1 cut(s) | 274 |
| BshFI | GGCC | 3 cut(s) | 20, 115, 168 |
| BsmI | GAATGC | 1 cut(s) | 207 |
| BsnI | GGCC | 3 cut(s) | 20, 115, 168 |
| Bsp1286I | GDGCHC | 1 cut(s) | 137 |
| Bsp19I | CCATGG | 1 cut(s) | 21 |
| BspACI | CCGC | 1 cut(s) | 53 |
| BspANI | GGCC | 3 cut(s) | 20, 115, 168 |
| BspLI | GGNNCC | 1 cut(s) | 136 |
| BsrI | ACTGG | 1 cut(s) | 274 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 1 cut(s) | 21 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| BstDSI | CCRYGG | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BsuRI | GGCC | 3 cut(s) | 20, 115, 168 |
| BtgI | CCRYGG | 1 cut(s) | 21 |
| Cfr13I | GGNCC | 1 cut(s) | 113 |
| Csp6I | GTAC | 2 cut(s) | 240, 265 |
| CviAII | CATG | 2 cut(s) | 22, 237 |
| CviJI | RGCY | 7 cut(s) | 11, 20, 56, 115, 135, 168, 256 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 20, 56, 115, 135, 168, 256 |
| CviQI | GTAC | 2 cut(s) | 240, 265 |
| EaeI | YGGCCR | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 21 |
| Eco24I | GRGCYC | 1 cut(s) | 137 |
| Eco57I | CTGAAG | 2 cut(s) | 78, 231 |
| EcoT14I | CCWWGG | 1 cut(s) | 21 |
| EcoT38I | GRGCYC | 1 cut(s) | 137 |
| ErhI | CCWWGG | 1 cut(s) | 21 |
| FaeI | CATG | 2 cut(s) | 25, 240 |
| FaiI | YATR | 3 cut(s) | 14, 23, 238 |
| FatI | CATG | 2 cut(s) | 21, 236 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| FriOI | GRGCYC | 1 cut(s) | 137 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| FspBI | CTAG | 1 cut(s) | 298 |
| GluI | GCNGC | 1 cut(s) | 54 |
| HaeIII | GGCC | 3 cut(s) | 20, 115, 168 |
| Hin1II | CATG | 2 cut(s) | 25, 240 |
| HinfI | GANTC | 2 cut(s) | 5, 44 |
| Hpy166II | GTNNAC | 2 cut(s) | 28, 295 |
| Hpy188III | TCNNGA | 1 cut(s) | 216 |
| Hpy8I | GTNNAC | 2 cut(s) | 28, 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| Hsp92II | CATG | 2 cut(s) | 25, 240 |
| LmnI | GCTCC | 2 cut(s) | 67, 140 |
| LpnPI | CCDG | 2 cut(s) | 234, 287 |
| MaeI | CTAG | 1 cut(s) | 298 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MaeIII | GTNAC | 1 cut(s) | 276 |
| MboII | GAAGA | 2 cut(s) | 71, 237 |
| MhlI | GDGCHC | 1 cut(s) | 137 |
| MluCI | AATT | 1 cut(s) | 78 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| MnlI | CCTC | 1 cut(s) | 126 |
| Mva1269I | GAATGC | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NcoI | CCATGG | 1 cut(s) | 21 |
| NlaIII | CATG | 2 cut(s) | 25, 240 |
| NlaIV | GGNNCC | 1 cut(s) | 136 |
| NmuCI | GTSAC | 1 cut(s) | 276 |
| PctI | GAATGC | 1 cut(s) | 207 |
| PfeI | GAWTC | 2 cut(s) | 5, 44 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| PspN4I | GGNNCC | 1 cut(s) | 136 |
| PspPI | GGNCC | 1 cut(s) | 113 |
| RsaI | GTAC | 2 cut(s) | 241, 266 |
| RsaNI | GTAC | 2 cut(s) | 240, 265 |
| SatI | GCNGC | 1 cut(s) | 54 |
| Sau96I | GGNCC | 1 cut(s) | 113 |
| SduI | GDGCHC | 1 cut(s) | 137 |
| SetI | ASST | 4 cut(s) | 13, 33, 182, 253 |
| SgeI | CNNG | 6 cut(s) | 34, 76, 228, 249, 261, 286 |
| Sse9I | AATT | 1 cut(s) | 78 |
| SsiI | CCGC | 1 cut(s) | 53 |
| SspMI | CTAG | 1 cut(s) | 298 |
| StyI | CCWWGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TasI | AATT | 1 cut(s) | 78 |
| TatI | WGTACW | 2 cut(s) | 239, 264 |
| TauI | GCSGC | 1 cut(s) | 56 |
| TfiI | GAWTC | 2 cut(s) | 5, 44 |
| TseFI | GTSAC | 1 cut(s) | 276 |
| Tsp45I | GTSAC | 1 cut(s) | 276 |
| XspI | CTAG | 1 cut(s) | 298 |