Rh6BG378500
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
60736265 .. 60736462
198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG378500.1

Sequence Viewer

Length: 198 bp
ATGGAGGACCGGAGTGCAACCATTTTTAAACCCCTCCTTGGTGATCTCATATTGACACTCCGCAAATCAGGAAAACCAGAGAGGAATGATGTCAAGTGGCACTCCAAGGAGGAACTAGAAAGTTTCAGGGTAGAAATGAAGAATGGTGCAGAGATGGTTCGAGAGTGCTGCAAGGTTGGTGAATGGGCCAGCTGTTGA

Protein Analysis

65

Amino Acids

7.51

Weight (kDa)

6.57

Isoelectric Point (pI)

33.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 61
AfiI CCNNNNNNNGG 1 cut(s) 38
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
AoxI GGCC 1 cut(s) 186
ApeKI GCWGC 1 cut(s) 168
AspS9I GGNCC 2 cut(s) 7, 186
AsuHPI GGTGA 2 cut(s) 53, 191
AvaII GGWCC 1 cut(s) 7
BbvI GCAGC 1 cut(s) 155
BccI CCATC 1 cut(s) 148
BcgI CGANNNNNNTGC 2 cut(s) 150, 184
BfaI CTAG 1 cut(s) 116
BisI GCNGC 1 cut(s) 169
BlsI GCNGC 1 cut(s) 170
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 2 cut(s) 7, 186
BsaJI CCNNGG 2 cut(s) 37, 105
BsaWI WCCGGW 1 cut(s) 9
Bsc4I CCNNNNNNNGG 1 cut(s) 38
BseDI CCNNGG 2 cut(s) 37, 105
BseLI CCNNNNNNNGG 1 cut(s) 38
BseXI GCAGC 1 cut(s) 155
BsgI GTGCAG 1 cut(s) 168
BshFI GGCC 1 cut(s) 188
BsiSI CCGG 1 cut(s) 10
BslI CCNNNNNNNGG 1 cut(s) 38
BsnI GGCC 1 cut(s) 188
Bsp143I GATC 1 cut(s) 43
BspACI CCGC 1 cut(s) 61
BspANI GGCC 1 cut(s) 188
BssECI CCNNGG 2 cut(s) 37, 105
BssMI GATC 1 cut(s) 43
BssT1I CCWWGG 2 cut(s) 37, 105
BstC8I GCNNGC 1 cut(s) 190
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstV1I GCAGC 1 cut(s) 155
BsuRI GGCC 1 cut(s) 188
Cac8I GCNNGC 1 cut(s) 190
Cfr13I GGNCC 2 cut(s) 7, 186
CviJI RGCY 2 cut(s) 188, 192
CviKI_1 RGCY 2 cut(s) 188, 192
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
DraI TTTAAA 1 cut(s) 28
Eco130I CCWWGG 2 cut(s) 37, 105
Eco47I GGWCC 1 cut(s) 7
EcoT14I CCWWGG 2 cut(s) 37, 105
ErhI CCWWGG 2 cut(s) 37, 105
FaiI YATR 1 cut(s) 50
Fnu4HI GCNGC 1 cut(s) 169
Fsp4HI GCNGC 1 cut(s) 169
FspBI CTAG 1 cut(s) 116
GluI GCNGC 1 cut(s) 169
HaeIII GGCC 1 cut(s) 188
HapII CCGG 1 cut(s) 10
HpaII CCGG 1 cut(s) 10
HphI GGTGA 2 cut(s) 53, 191
Hpy188III TCNNGA 2 cut(s) 69, 161
HpyCH4V TGCA 3 cut(s) 17, 149, 171
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 4 cut(s) 23, 54, 90, 112
Lsp1109I GCAGC 1 cut(s) 155
MaeI CTAG 1 cut(s) 116
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 1 cut(s) 151
MnlI CCTC 3 cut(s) 44, 75, 103
MseI TTAA 1 cut(s) 27
MspA1I CMGCKG 1 cut(s) 192
MspI CCGG 1 cut(s) 10
NdeII GATC 1 cut(s) 43
PkrI GCNGC 1 cut(s) 170
PspPI GGNCC 2 cut(s) 7, 186
PvuII CAGCTG 1 cut(s) 192
SaqAI TTAA 1 cut(s) 27
SatI GCNGC 1 cut(s) 169
Sau3AI GATC 1 cut(s) 43
Sau96I GGNCC 2 cut(s) 7, 186
SetI ASST 2 cut(s) 177, 194
SinI GGWCC 1 cut(s) 7
SsiI CCGC 1 cut(s) 61
SspMI CTAG 1 cut(s) 116
StyI CCWWGG 2 cut(s) 37, 105
TaqI TCGA 1 cut(s) 160
Tru1I TTAA 1 cut(s) 27
Tru9I TTAA 1 cut(s) 27
TseI GCWGC 1 cut(s) 168
TspDTI ATGAA 1 cut(s) 152
VpaK11BI GGWCC 1 cut(s) 7
XspI CTAG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.