Rh6DG371000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
56681941 .. 56682168
228 bp
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UTR
Exon/CDS
Intron
Rh6DG371000.1

Sequence Viewer

Length: 228 bp
ATGAAGAATGGTGCAGAGATGGTTCGAGAGTGCTGCAAGGTTGGTGAATGGGCCAGCTACAACACAAAGTATAAGTACATCAACGCACTTCTCGGATTGAATCAATCTCTGCGGAGAATGAAATATGTAAAGTTCGAGAGGGTGAGGGAGGATATGGTTGGGATAAGAAATATAGAGCCACTGGTGGACAGAGTCGAAAGGGCTCTGGCTCTGGCAGTGCAAATTTAA

Protein Analysis

75

Amino Acids

8.78

Weight (kDa)

9.51

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 112
AcsI RAATTY 1 cut(s) 222
AfaI GTAC 1 cut(s) 77
AgsI TTSAA 1 cut(s) 100
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
AoxI GGCC 1 cut(s) 51
ApeKI GCWGC 1 cut(s) 33
ApoI RAATTY 1 cut(s) 222
AspS9I GGNCC 1 cut(s) 51
AsuHPI GGTGA 2 cut(s) 56, 154
BanII GRGCYC 1 cut(s) 205
BbvI GCAGC 1 cut(s) 20
BccI CCATC 1 cut(s) 13
BcgI CGANNNNNNTGC 2 cut(s) 15, 49
BisI GCNGC 1 cut(s) 34
BlsI GCNGC 1 cut(s) 35
BmgT120I GGNCC 1 cut(s) 51
Bse1I ACTGG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 186
BseXI GCAGC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 33
BshFI GGCC 1 cut(s) 53
BsnI GGCC 1 cut(s) 53
Bsp1286I GDGCHC 1 cut(s) 205
BspACI CCGC 1 cut(s) 112
BspANI GGCC 1 cut(s) 53
BsrI ACTGG 1 cut(s) 186
BstC8I GCNNGC 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 20
BsuRI GGCC 1 cut(s) 53
BtsI GCAGTG 1 cut(s) 222
BtsIMutI CAGTG 2 cut(s) 179, 222
Cac8I GCNNGC 1 cut(s) 55
Cfr13I GGNCC 1 cut(s) 51
Csp6I GTAC 1 cut(s) 76
CviJI RGCY 5 cut(s) 53, 57, 178, 203, 209
CviKI_1 RGCY 5 cut(s) 53, 57, 178, 203, 209
CviQI GTAC 1 cut(s) 76
Eco24I GRGCYC 1 cut(s) 205
EcoT38I GRGCYC 1 cut(s) 205
FaiI YATR 4 cut(s) 72, 126, 155, 173
Fnu4HI GCNGC 1 cut(s) 34
FriOI GRGCYC 1 cut(s) 205
Fsp4HI GCNGC 1 cut(s) 34
GluI GCNGC 1 cut(s) 34
HaeIII GGCC 1 cut(s) 53
HinfI GANTC 2 cut(s) 100, 192
HphI GGTGA 2 cut(s) 56, 154
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 1 cut(s) 95
Hpy188III TCNNGA 2 cut(s) 26, 136
Hpy8I GTNNAC 1 cut(s) 187
HpyCH4V TGCA 3 cut(s) 14, 36, 220
LpnPI CCDG 4 cut(s) 67, 167, 191, 197
Lsp1109I GCAGC 1 cut(s) 20
MboII GAAGA 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 205
MluCI AATT 1 cut(s) 222
MlyI GAGTC 1 cut(s) 201
MnlI CCTC 3 cut(s) 132, 138, 142
MseI TTAA 1 cut(s) 226
PfeI GAWTC 1 cut(s) 100
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 1 cut(s) 35
PleI GAGTC 1 cut(s) 200
PpsI GAGTC 1 cut(s) 200
PspPI GGNCC 1 cut(s) 51
PsyI GACNNNGTC 1 cut(s) 191
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SaqAI TTAA 1 cut(s) 226
SatI GCNGC 1 cut(s) 34
Sau96I GGNCC 1 cut(s) 51
SchI GAGTC 1 cut(s) 201
SduI GDGCHC 1 cut(s) 205
SetI ASST 2 cut(s) 42, 59
SgeI CNNG 8 cut(s) 38, 49, 66, 104, 148, 194, 218, 224
Sse9I AATT 1 cut(s) 222
SsiI CCGC 1 cut(s) 112
TaqI TCGA 3 cut(s) 25, 135, 195
TasI AATT 1 cut(s) 222
TatI WGTACW 1 cut(s) 75
TfiI GAWTC 1 cut(s) 100
Tru1I TTAA 1 cut(s) 226
Tru9I TTAA 1 cut(s) 226
TscAI CASTG 2 cut(s) 186, 222
TseI GCWGC 1 cut(s) 33
TspDTI ATGAA 2 cut(s) 17, 134
TspRI CASTG 2 cut(s) 186, 222
Tth111I GACNNNGTC 1 cut(s) 191
XapI RAATTY 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.