Rh7BG001200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
97686 .. 100131
2446 bp
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UTR
Exon/CDS
Intron
Rh7BG001200.1

Sequence Viewer

Length: 465 bp
ATGATTTCGTTTAGAAGAGAAAGATATATAATTGTTTCGATTGACACGAAAGATCCGGTTCTTGCAGGCGGAAAGGGAATTATTTATGGGTATCGTTCAATCCCAAACCTATTTGAACGAATCTCCCACCGCCAAAACAGAAGCATTGAAAGAAGGGTAGCGGTCAAAAACTCTGTCATGGAAGAAAAGAAGGAAAAAAGCTGTGGTTATCTAAAGTTGGAATGGGCTTCCATGGTGCTACCTGCTAAGTTCTTCCAGCGAAACTGGGATTATGATGTTGCTGTTATGTCTCTTTGTTATTTACCTTCTCAATACATCTTTGGTGCTGCAGAATCATTTGGCTTTCAAAGTCCACAAGCTCTATGGAGTATGGAAAAAAATGGACGAATGGTTGCCGGATATTATTGGAGTGTGTGGATGCTTTCCATCCCTCTATACTTTCACCAAGGCGAGAATATCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

154

Amino Acids

18.03

Weight (kDa)

9.37

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 250
AciI CCGC 3 cut(s) 69, 130, 161
AclWI GGATC 1 cut(s) 47
AgsI TTSAA 4 cut(s) 99, 116, 149, 347
AluBI AGCT 2 cut(s) 201, 359
AluI AGCT 2 cut(s) 201, 359
Alw26I GTCTC 1 cut(s) 294
AlwI GGATC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 326
ArsI GACNNNNNNTTYG 2 cut(s) 159, 191
AsuHPI GGTGA 1 cut(s) 434
BbvI GCAGC 1 cut(s) 313
BccI CCATC 1 cut(s) 434
BcoDI GTCTC 1 cut(s) 294
BfmI CTRYAG 1 cut(s) 327
BfuAI ACCTGC 1 cut(s) 250
BisI GCNGC 1 cut(s) 327
BlsI GCNGC 1 cut(s) 328
BmrI ACTGGG 1 cut(s) 274
BmsI GCATC 1 cut(s) 408
BmuI ACTGGG 1 cut(s) 274
BsaJI CCNNGG 2 cut(s) 231, 445
BsaWI WCCGGW 1 cut(s) 55
Bse1I ACTGG 1 cut(s) 269
BseDI CCNNGG 2 cut(s) 231, 445
BseGI GGATG 2 cut(s) 423, 426
BseNI ACTGG 1 cut(s) 269
BseXI GCAGC 1 cut(s) 313
BsiSI CCGG 2 cut(s) 56, 396
BsmAI GTCTC 1 cut(s) 294
Bsp143I GATC 1 cut(s) 52
Bsp19I CCATGG 1 cut(s) 231
BspACI CCGC 3 cut(s) 69, 130, 161
BspMAI CTGCAG 1 cut(s) 331
BspMI ACCTGC 1 cut(s) 250
BspPI GGATC 1 cut(s) 47
BsrI ACTGG 1 cut(s) 269
BssECI CCNNGG 2 cut(s) 231, 445
BssMI GATC 1 cut(s) 52
BssT1I CCWWGG 2 cut(s) 231, 445
Bst6I CTCTTC 1 cut(s) 10
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 1 cut(s) 246
BstDSI CCRYGG 1 cut(s) 231
BstF5I GGATG 2 cut(s) 423, 426
BstKTI GATC 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 294
BstMBI GATC 1 cut(s) 52
BstSFI CTRYAG 1 cut(s) 327
BstV1I GCAGC 1 cut(s) 313
BstX2I RGATCY 1 cut(s) 52
BstYI RGATCY 1 cut(s) 52
BtgI CCRYGG 1 cut(s) 231
BtsCI GGATG 2 cut(s) 423, 426
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 1 cut(s) 67
CviAII CATG 2 cut(s) 178, 232
CviJI RGCY 4 cut(s) 201, 227, 342, 359
CviKI_1 RGCY 4 cut(s) 201, 227, 342, 359
DdeI CTNAG 1 cut(s) 246
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Eam1104I CTCTTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 10
EciI GGCGGA 1 cut(s) 84
Eco130I CCWWGG 2 cut(s) 231, 445
EcoT14I CCWWGG 2 cut(s) 231, 445
ErhI CCWWGG 2 cut(s) 231, 445
FaeI CATG 2 cut(s) 181, 235
FatI CATG 2 cut(s) 177, 231
Fnu4HI GCNGC 1 cut(s) 327
FokI GGATG 2 cut(s) 413, 430
Fsp4HI GCNGC 1 cut(s) 327
GluI GCNGC 1 cut(s) 327
HapII CCGG 2 cut(s) 56, 396
Hin1II CATG 2 cut(s) 181, 235
HinfI GANTC 2 cut(s) 120, 332
HpaII CCGG 2 cut(s) 56, 396
HphI GGTGA 1 cut(s) 434
Hpy166II GTNNAC 1 cut(s) 353
Hpy8I GTNNAC 1 cut(s) 353
HpyAV CCTTC 3 cut(s) 147, 184, 315
HpyCH4V TGCA 2 cut(s) 65, 329
HpyF3I CTNAG 1 cut(s) 246
Hsp92II CATG 2 cut(s) 181, 235
Kzo9I GATC 1 cut(s) 52
LpnPI CCDG 6 cut(s) 51, 69, 250, 255, 269, 409
Lsp1109I GCAGC 1 cut(s) 313
LweI GCATC 1 cut(s) 408
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 3 cut(s) 27, 194, 244
MflI RGATCY 1 cut(s) 52
MluCI AATT 3 cut(s) 30, 78, 460
MmeI TCCRAC 1 cut(s) 198
MnlI CCTC 1 cut(s) 441
MseI TTAA 1 cut(s) 463
MspI CCGG 2 cut(s) 56, 396
NcoI CCATGG 1 cut(s) 231
NdeII GATC 1 cut(s) 52
NlaIII CATG 2 cut(s) 181, 235
PcsI WCGNNNNNNNCGW 1 cut(s) 44
PfeI GAWTC 2 cut(s) 120, 332
PkrI GCNGC 1 cut(s) 328
PstI CTGCAG 1 cut(s) 331
PsuI RGATCY 1 cut(s) 52
SaqAI TTAA 1 cut(s) 463
SatI GCNGC 1 cut(s) 327
Sau3AI GATC 1 cut(s) 52
SetI ASST 5 cut(s) 111, 203, 244, 307, 361
SfaNI GCATC 1 cut(s) 408
SfcI CTRYAG 1 cut(s) 327
Sse9I AATT 3 cut(s) 30, 78, 460
SsiI CCGC 3 cut(s) 69, 130, 161
StyI CCWWGG 2 cut(s) 231, 445
TaqI TCGA 1 cut(s) 38
TasI AATT 3 cut(s) 30, 78, 460
TfiI GAWTC 2 cut(s) 120, 332
Tru1I TTAA 1 cut(s) 463
Tru9I TTAA 1 cut(s) 463
TseI GCWGC 1 cut(s) 326
XcmI CCANNNNNNNNNTGG 1 cut(s) 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.