Rh7BG318600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
30923543 .. 30926263
2721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG318600.1

Sequence Viewer

Length: 336 bp
ATGGCCCAGTTGAGAGAGGTGACATTGCAGGAGGAAAATGCTGCATATGAAAAGGCTATATCAAACTGTGAAAGTAAAATACAGGAGAAGATTGAGGAAGCGGAGTTACTTAGGAGGAAGTTAGAGGAATTGGAGGACACTGAAAAGAATTTGAGAGATGAGCTGGAAAATGCACAAACAGCATTGGATACCAGTCGATCTCGCGGATCAGATGAAGCTGTTGGCAACTCCAAAACATCAGTTGAAACTGGAGATGACATGGAATCATCAAAGAAAGCTATACTAGACAAGTTAGAGGAGAGGAAAAGAGAATTGGTTCGTTGCTCTTTCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

12.69

Weight (kDa)

4.69

Isoelectric Point (pI)

52.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 204
AciI CCGC 2 cut(s) 101, 204
AclWI GGATC 1 cut(s) 214
AcsI RAATTY 1 cut(s) 148
AgsI TTSAA 1 cut(s) 245
AjuI GAANNNNNNNTTGG 2 cut(s) 296, 328
AluBI AGCT 3 cut(s) 163, 218, 278
AluI AGCT 3 cut(s) 163, 218, 278
AlwI GGATC 1 cut(s) 214
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 41
ApoI RAATTY 1 cut(s) 148
Asp700I GAANNNNTTC 1 cut(s) 315
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 31
BarI GAAGNNNNNNTAC 2 cut(s) 90, 122
BbvI GCAGC 1 cut(s) 28
BciVI GTATCC 1 cut(s) 181
BfaI CTAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 181
BisI GCNGC 1 cut(s) 42
BlsI GCNGC 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 4
BpmI CTGGAG 1 cut(s) 270
Bse1I ACTGG 3 cut(s) 7, 192, 253
Bse3DI GCAATG 1 cut(s) 23
BseMI GCAATG 1 cut(s) 23
BseNI ACTGG 3 cut(s) 7, 192, 253
BseRI GAGGAG 1 cut(s) 311
BseXI GCAGC 1 cut(s) 28
Bsh1236I CGCG 1 cut(s) 204
BshFI GGCC 1 cut(s) 5
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 2 cut(s) 197, 206
BspACI CCGC 2 cut(s) 101, 204
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 204
BspPI GGATC 1 cut(s) 214
BsrDI GCAATG 1 cut(s) 23
BsrI ACTGG 3 cut(s) 7, 192, 253
BssMI GATC 2 cut(s) 197, 206
Bst4CI ACNGT 1 cut(s) 68
BstDEI CTNAG 1 cut(s) 110
BstFNI CGCG 1 cut(s) 204
BstKTI GATC 2 cut(s) 200, 209
BstMBI GATC 2 cut(s) 197, 206
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstUI CGCG 1 cut(s) 204
BstV1I GCAGC 1 cut(s) 28
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 1 cut(s) 5
BtsIMutI CAGTG 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 4
CviAII CATG 1 cut(s) 259
CviJI RGCY 5 cut(s) 5, 56, 163, 218, 278
CviKI_1 RGCY 5 cut(s) 5, 56, 163, 218, 278
DdeI CTNAG 1 cut(s) 110
DpnI GATC 2 cut(s) 199, 208
DpnII GATC 2 cut(s) 197, 206
FaeI CATG 1 cut(s) 262
FaiI YATR 5 cut(s) 46, 48, 59, 260, 281
FatI CATG 1 cut(s) 258
FauNDI CATATG 1 cut(s) 46
Fnu4HI GCNGC 1 cut(s) 42
Fsp4HI GCNGC 1 cut(s) 42
FspBI CTAG 1 cut(s) 284
GluI GCNGC 1 cut(s) 42
GsuI CTGGAG 1 cut(s) 270
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 1 cut(s) 262
HinfI GANTC 1 cut(s) 263
HphI GGTGA 1 cut(s) 31
Hpy188I TCNGA 1 cut(s) 211
HpyCH4III ACNGT 1 cut(s) 68
HpyCH4V TGCA 3 cut(s) 28, 44, 173
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
HpyF3I CTNAG 1 cut(s) 110
Hsp92II CATG 1 cut(s) 262
Kzo9I GATC 2 cut(s) 197, 206
LpnPI CCDG 6 cut(s) 14, 20, 68, 149, 205, 234
Lsp1109I GCAGC 1 cut(s) 28
MaeI CTAG 1 cut(s) 284
MaeIII GTNAC 2 cut(s) 19, 105
MalI GATC 2 cut(s) 199, 208
MboI GATC 2 cut(s) 197, 206
MboII GAAGA 1 cut(s) 100
MluCI AATT 3 cut(s) 128, 148, 311
MnlI CCTC 8 cut(s) 10, 25, 88, 108, 118, 127, 289, 294
MroXI GAANNNNTTC 1 cut(s) 315
MvnI CGCG 1 cut(s) 204
MwoI GCNNNNNNNGC 1 cut(s) 179
NdeI CATATG 1 cut(s) 46
NdeII GATC 2 cut(s) 197, 206
NlaIII CATG 1 cut(s) 262
NmuCI GTSAC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 315
PfeI GAWTC 1 cut(s) 263
PkrI GCNGC 1 cut(s) 43
PspPI GGNCC 1 cut(s) 4
SatI GCNGC 1 cut(s) 42
Sau3AI GATC 2 cut(s) 197, 206
Sau96I GGNCC 1 cut(s) 4
SetI ASST 4 cut(s) 21, 165, 220, 280
Sse9I AATT 3 cut(s) 128, 148, 311
SsiI CCGC 2 cut(s) 101, 204
SspMI CTAG 1 cut(s) 284
TaaI ACNGT 1 cut(s) 68
TaqI TCGA 1 cut(s) 196
TasI AATT 3 cut(s) 128, 148, 311
TfiI GAWTC 1 cut(s) 263
TscAI CASTG 1 cut(s) 145
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 1 cut(s) 41
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 2 cut(s) 63, 228
TspRI CASTG 1 cut(s) 145
XapI RAATTY 1 cut(s) 148
XmnI GAANNNNTTC 1 cut(s) 315
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.