Rh7CG467800

Glutathione peroxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002888
Physical Location & Seq
Forward (+)
62536576 .. 62538245
1670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG467800.1

Sequence Viewer

Length: 333 bp
ATGTTAGTGCAGGATGCTAAGGAGAATGATGTGGATCATAACGTTTACAAGGGAAAAGTTCTGCTCATTGTCAAAGTTGCTTCCAAATGTGGACTAACAAACTCAAACTACACGGAGCTGAATCAACTATATGAAAAGTATAAAGATCAAGGAGTCAAGATACTGGCTACAATAAGTTTGCTGCACAGGAACCCGGAAGTAATGAAGAGATTAAAGACATGGCATAAAGACAGCTGTTGGGAGTCTCACGAAGGCTTCGATGGGGTCTCAGCACAGTCAAGCAGTATGCATATGCTTGCCTTTTGTGTACCGAAAGGAAAAAATAAAAATTGA

Protein Analysis

110

Amino Acids

12.51

Weight (kDa)

8.98

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSHPx PF00255 3 - 56 4.1e-15 Glutathione peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 42
AclWI GGATC 1 cut(s) 42
AfaI GTAC 1 cut(s) 309
AluBI AGCT 2 cut(s) 118, 234
AluI AGCT 2 cut(s) 118, 234
Alw26I GTCTC 2 cut(s) 249, 271
AlwI GGATC 1 cut(s) 42
ApeKI GCWGC 1 cut(s) 181
AsuC2I CCSGG 1 cut(s) 194
BbvI GCAGC 1 cut(s) 168
BccI CCATC 1 cut(s) 254
BcnI CCSGG 1 cut(s) 194
BcoDI GTCTC 2 cut(s) 249, 271
BisI GCNGC 1 cut(s) 182
BlsI GCNGC 1 cut(s) 183
Bme1390I CCNGG 1 cut(s) 194
BmiI GGNNCC 1 cut(s) 191
BmrFI CCNGG 1 cut(s) 194
BmsI GCATC 1 cut(s) 4
Bpu10I CCTNAGC 1 cut(s) 18
BpuMI CCSGG 1 cut(s) 194
BsaBI GATNNNNATC 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 271
Bse1I ACTGG 1 cut(s) 168
Bse8I GATNNNNATC 1 cut(s) 33
BseGI GGATG 1 cut(s) 19
BseJI GATNNNNATC 1 cut(s) 33
BseMII CTCAG 1 cut(s) 282
BseNI ACTGG 1 cut(s) 168
BseXI GCAGC 1 cut(s) 168
BsgI GTGCAG 2 cut(s) 29, 167
BsiSI CCGG 1 cut(s) 194
BsmAI GTCTC 2 cut(s) 249, 271
Bso31I GGTCTC 1 cut(s) 271
Bsp143I GATC 2 cut(s) 34, 145
BspCNI CTCAG 1 cut(s) 281
BspLI GGNNCC 1 cut(s) 191
BspPI GGATC 1 cut(s) 42
BspTNI GGTCTC 1 cut(s) 271
BsrI ACTGG 1 cut(s) 168
BssMI GATC 2 cut(s) 34, 145
Bst4CI ACNGT 1 cut(s) 276
Bst6I CTCTTC 1 cut(s) 200
BstC8I GCNNGC 1 cut(s) 297
BstDEI CTNAG 2 cut(s) 18, 268
BstF5I GGATG 1 cut(s) 19
BstKTI GATC 2 cut(s) 37, 148
BstMAI GTCTC 2 cut(s) 249, 271
BstMBI GATC 2 cut(s) 34, 145
BstSCI CCNGG 1 cut(s) 192
BstV1I GCAGC 1 cut(s) 168
BtsCI GGATG 1 cut(s) 19
Cac8I GCNNGC 1 cut(s) 297
Csp6I GTAC 1 cut(s) 308
CviAII CATG 1 cut(s) 219
CviJI RGCY 4 cut(s) 118, 167, 234, 255
CviKI_1 RGCY 4 cut(s) 118, 167, 234, 255
CviQI GTAC 1 cut(s) 308
DdeI CTNAG 2 cut(s) 18, 268
DpnI GATC 2 cut(s) 36, 147
DpnII GATC 2 cut(s) 34, 145
Eam1104I CTCTTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 200
Eco31I GGTCTC 1 cut(s) 271
EcoT22I ATGCAT 1 cut(s) 291
FaeI CATG 1 cut(s) 222
FaiI YATR 9 cut(s) 39, 130, 132, 141, 220, 225, 287, 291, 293
FatI CATG 1 cut(s) 218
FauNDI CATATG 1 cut(s) 291
Fnu4HI GCNGC 1 cut(s) 182
FokI GGATG 1 cut(s) 26
Fsp4HI GCNGC 1 cut(s) 182
GluI GCNGC 1 cut(s) 182
HapII CCGG 1 cut(s) 194
Hin1II CATG 1 cut(s) 222
HinfI GANTC 3 cut(s) 121, 153, 242
HpaII CCGG 1 cut(s) 194
Hpy166II GTNNAC 3 cut(s) 46, 92, 308
Hpy188III TCNNGA 2 cut(s) 157, 248
Hpy8I GTNNAC 3 cut(s) 46, 92, 308
HpyAV CCTTC 1 cut(s) 245
HpyCH4III ACNGT 1 cut(s) 276
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 3 cut(s) 10, 184, 289
HpyF3I CTNAG 2 cut(s) 18, 268
HpySE526I ACGT 1 cut(s) 42
Hsp92II CATG 1 cut(s) 222
Kzo9I GATC 2 cut(s) 34, 145
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 3 cut(s) 149, 172, 207
Lsp1109I GCAGC 1 cut(s) 168
LweI GCATC 1 cut(s) 4
MaeII ACGT 1 cut(s) 42
MalI GATC 2 cut(s) 36, 147
MboI GATC 2 cut(s) 34, 145
MboII GAAGA 1 cut(s) 217
MluCI AATT 1 cut(s) 328
MlyI GAGTC 2 cut(s) 162, 251
Mph1103I ATGCAT 1 cut(s) 291
MseI TTAA 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 234
MspI CCGG 1 cut(s) 194
MspR9I CCNGG 1 cut(s) 194
NciI CCSGG 1 cut(s) 194
NdeI CATATG 1 cut(s) 291
NdeII GATC 2 cut(s) 34, 145
NlaIII CATG 1 cut(s) 222
NlaIV GGNNCC 1 cut(s) 191
NsiI ATGCAT 1 cut(s) 291
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PfeI GAWTC 1 cut(s) 121
PkrI GCNGC 1 cut(s) 183
PleI GAGTC 2 cut(s) 161, 250
PpsI GAGTC 2 cut(s) 161, 250
Psp1406I AACGTT 1 cut(s) 42
PspN4I GGNNCC 1 cut(s) 191
PvuII CAGCTG 1 cut(s) 234
RsaI GTAC 1 cut(s) 309
RsaNI GTAC 1 cut(s) 308
SaqAI TTAA 1 cut(s) 212
SatI GCNGC 1 cut(s) 182
Sau3AI GATC 2 cut(s) 34, 145
SchI GAGTC 2 cut(s) 162, 251
ScrFI CCNGG 1 cut(s) 194
SetI ASST 3 cut(s) 45, 120, 236
SfaNI GCATC 1 cut(s) 4
Sse9I AATT 1 cut(s) 328
StyD4I CCNGG 1 cut(s) 192
TaaI ACNGT 1 cut(s) 276
TaiI ACGT 1 cut(s) 45
TaqI TCGA 1 cut(s) 258
TasI AATT 1 cut(s) 328
TfiI GAWTC 1 cut(s) 121
Tru1I TTAA 1 cut(s) 212
Tru9I TTAA 1 cut(s) 212
TseI GCWGC 1 cut(s) 181
TspDTI ATGAA 2 cut(s) 147, 218
TspGWI ACGGA 1 cut(s) 128
Zsp2I ATGCAT 1 cut(s) 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.