Rw3G021560

DNA-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0003053
Physical Location & Seq
Forward (+)
26163114 .. 26170000
6887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G021560.1

Sequence Viewer

Length: 1755 bp
ATGGGCAAGACTCTTCTTGAGTTCCAGTCTACCAAAACAGAAAACAGTAATGCTCTTCCTCTTCCTCCTCACAAGTTTGGCACTCATGATGTGGTTGTTCTAAGACCAAATAAGGCTGATTTGGGCTCACCTGATCTTGGACAAGGCGTAGTTTACCGGTTAAAGGACTCATCAATCACGGTTGCTTTTGATGACGTTCCCGAAGACGGATTAAATAGTCCCCTACGGCTAGAGAAACTCACAAATGAAGTGACATATCGTAGGATGAAGGACGCCTTGATACAATTGAGTAAAGGTGTGCACAAGGGTCCTGCTTCTGATTTAATTCCTGTCTTGTTTGGAGAGAGGGCACCAACCGTGGCTAAGAAGGAAGTCACATTCTCCCCATTTAACAAAAACCTTGATCACTCTCAGAAAGATGCCATTTCAAAGGCTCTGTCATCCAAGAATGTATTTTTGCTGCATGGGCCTCCTGGAACAGGCAAAACCACAACTGTGGTGGAAATTATATTGCAAGAAGTCAAACGTGGATCAAAGATCCTTGCATGTGCTGCTTCCAATATTGCTGTTGACAACATTGTTGAGCGACTGGCACGCCAAAGAGTAAAGTTAGTGAGGTTGGGACATCCTGCACGTTTACTACCTCAAGTACTGGAAAGTGCACTGGATGCACAGGTCTTGCGAGGAGATAACAGTGCTCTGGCAAATGACATTCGAAAGGAAATGAAGGCATTGAATGGAAAGCTGTTAAGAACCAAAGACAAAAACACTAGGAGGGAAATCCAGAAAGAGCTTAGGATTCTTTCCAAGGAAGAGCGTAAAAGGCAGCAGCTTGCTGTGACAGATGTAATAAAAAATGCAGATGTGGTGTTGACAACTTTGACTGGGGCATCGTCTCGCAAGCTGGACCACACATCATTTGACTTGGTAATTATTGATGAAGCTGCTCAGGCACTTGAGATAGCATGCTGGATAGCACTGCTAAAGGGTTCAAGATGTATACTTGCAGGCGACCATCTTCAGCTTCCTCCAACCATCCAGAGTGCTGAAGCTGAGAAGAAAGGTTTAGGAAGAACCCTTTTTGAACGCCTTGCGGACATATATGGAAATGAAGTGGTATCGATGCTGACTGTTCAGTACCGCATGCATGAGCGTATCATGGATTGGTCGTCAAAGGAGCTTTACAATAGTAAGGTTAAAGCGCATCCAAGTGTTGCTGCACATATGCTTTTGGATCTCGAGGATGTAAAGAAGACCTCTTCAACAGAATCAACCCTTCTTCTAATTGATATAGCTGGGTGTGACATGGAAGAAAAGAAGGATGAAGAGGAAAGCACTATGAATGAGGGTGAAGCTGATGTTGCTATTGCCCATGCAAAGAGACTCATTCAAAGCGGTGTCCAGGCTTCTGATATTGGAATTATCACCCCTTATGCTGCACAGGTTTTCATACTGAAGAAGTTGAAAAGCAATGAAGAAAAGCTAAAGGATTTGGAAATCTCGACAGTCGATGGCTTCCAGGGCCGGGAAAAGGAAGCCATCATTATTTCAATGGTTCGATCAAACTCAAAGAAAGAGGTTGGGTTTCTGAGCGATCACAGGCGAATGAACGTGGCTGTAACACGAGCAAGAAGGCAATGTTGTCTTGTCTGTGACACTGAGACAGTGAGTAATGATGCATTCTTGAAGCGATTGATAGAGTACTTTGAGGAGCATGGTGAGTATCTAAGTGCCTCAGAGTATAGTAATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000049 GO:0000122 GO:0000166 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003008 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003690 GO:0003697 GO:0003700 GO:0003723 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0007275 GO:0007399 GO:0007417 GO:0008026 GO:0008094 GO:0008134 GO:0008144 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0021510 GO:0021515 GO:0021517 GO:0021522 GO:0021953 GO:0022008 GO:0022607 GO:0030154 GO:0030182 GO:0030424 GO:0030426 GO:0030427 GO:0030554 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032574 GO:0032575 GO:0032991 GO:0033267 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0036477 GO:0042623 GO:0042995 GO:0043005 GO:0043021 GO:0043022 GO:0043025 GO:0043043 GO:0043139 GO:0043141 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043603 GO:0043604 GO:0043621 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044297 GO:0044424 GO:0044444 GO:0044463 GO:0044464 GO:0044877 GO:0045892 GO:0045934 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050877 GO:0050905 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051259 GO:0051260 GO:0051276 GO:0060255 GO:0065003 GO:0065007 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0097367 GO:0097458 GO:0120025 GO:0120038 GO:0140097 GO:0140098 GO:0140110 GO:0150034 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:1990904 GO:1990955 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

584

Amino Acids

64.86

Weight (kDa)

8.01

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SMUBP-2_HCS1_1B PF21138 2 - 67 2.9e-07 Helicase SMUBP-2/HCS1, 1B domain
AAA_11 PF13086 133 - 348 1.6e-66 AAA domain
AAA_30 PF13604 134 - 344 2.6e-09 AAA domain
AAA_19 PF13245 138 - 345 4.4e-11 AAA domain
AAA_12 PF13087 357 - 553 1.6e-63 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 349
AccI GTMKAC 2 cut(s) 29, 1000
AciI CCGC 3 cut(s) 1094, 1141, 1395
AclWI GGATC 3 cut(s) 532, 538, 1242
AcuI CTGAAG 3 cut(s) 1004, 1068, 1475
AcyI GRCGYC 1 cut(s) 273
AfaI GTAC 3 cut(s) 651, 1139, 1703
AfiI CCNNNNNNNGG 6 cut(s) 137, 163, 206, 479, 1525, 1531
AgeI ACCGGT 1 cut(s) 156
AgsI TTSAA 9 cut(s) 429, 736, 993, 1085, 1263, 1391, 1465, 1551, 1687
AjnI CCWGG 3 cut(s) 472, 1401, 1518
AleI CACNNNNGTG 1 cut(s) 494
Alw21I GWGCWC 3 cut(s) 303, 664, 700
Alw26I GTCTC 3 cut(s) 900, 1375, 1655
Alw44I GTGCAC 2 cut(s) 299, 660
AlwI GGATC 3 cut(s) 532, 538, 1242
Ama87I CYCGRG 1 cut(s) 1238
AoxI GGCC 2 cut(s) 467, 1522
ApaLI GTGCAC 2 cut(s) 299, 660
ApeKI GCWGC 7 cut(s) 460, 551, 826, 829, 944, 1217, 1436
ArsI GACNNNNNNTTYG 2 cut(s) 422, 454
AsiGI ACCGGT 1 cut(s) 156
AspLEI GCGC 1 cut(s) 1204
AspS9I GGNCC 4 cut(s) 308, 467, 907, 1522
AsuC2I CCSGG 1 cut(s) 1526
AsuHPI GGTGA 4 cut(s) 120, 1361, 1417, 1730
AsuII TTCGAA 1 cut(s) 715
AvaI CYCGRG 1 cut(s) 1238
AvaII GGWCC 2 cut(s) 308, 907
BaeGI GKGCMC 3 cut(s) 303, 352, 664
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 1 cut(s) 128
BauI CACGAG 1 cut(s) 1623
BbsI GAAGAC 2 cut(s) 210, 1259
Bbv12I GWGCWC 3 cut(s) 303, 664, 700
BbvI GCAGC 7 cut(s) 447, 538, 838, 841, 931, 1204, 1423
BccI CCATC 4 cut(s) 1023, 1043, 1505, 1547
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 3 cut(s) 474, 1403, 1520
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 1 cut(s) 1526
BcoDI GTCTC 3 cut(s) 900, 1375, 1655
BfaI CTAG 2 cut(s) 230, 771
BisI GCNGC 7 cut(s) 461, 552, 827, 830, 945, 1218, 1437
BlsI GCNGC 7 cut(s) 462, 553, 828, 831, 946, 1219, 1438
BmcAI AGTACT 2 cut(s) 651, 1703
Bme1390I CCNGG 4 cut(s) 474, 1403, 1520, 1526
Bme18I GGWCC 2 cut(s) 308, 907
BmeT110I CYCGRG 1 cut(s) 1238
BmgT120I GGNCC 4 cut(s) 308, 467, 907, 1522
BmiI GGNNCC 2 cut(s) 309, 351
BmrFI CCNGG 4 cut(s) 474, 1403, 1520, 1526
BmrI ACTGGG 1 cut(s) 894
BmsI GCATC 6 cut(s) 409, 658, 899, 1113, 1213, 1666
BmuI ACTGGG 1 cut(s) 894
BpiI GAAGAC 2 cut(s) 210, 1259
Bpu10I CCTNAGC 2 cut(s) 794, 948
Bpu14I TTCGAA 1 cut(s) 715
BpuEI CTTGAG 3 cut(s) 38, 630, 977
BpuMI CCSGG 1 cut(s) 1526
Bsa29I ATCGAT 1 cut(s) 1121
BsaHI GRCGYC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 357, 807, 1519
BsaWI WCCGGW 1 cut(s) 156
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 163, 206, 479, 1525, 1531
Bse118I RCCGGY 1 cut(s) 156
Bse1I ACTGG 5 cut(s) 25, 594, 657, 669, 889
Bse3DI GCAATG 2 cut(s) 1477, 1643
BseBI CCWGG 3 cut(s) 474, 1403, 1520
BseCI ATCGAT 1 cut(s) 1121
BseDI CCNNGG 3 cut(s) 357, 807, 1519
BseGI GGATG 8 cut(s) 270, 440, 625, 673, 1035, 1204, 1249, 1327
BseLI CCNNNNNNNGG 6 cut(s) 137, 163, 206, 479, 1525, 1531
BseMI GCAATG 2 cut(s) 1477, 1643
BseMII CTCAG 6 cut(s) 425, 962, 1044, 1580, 1650, 1749
BseNI ACTGG 5 cut(s) 25, 594, 657, 669, 889
BseRI GAGGAG 3 cut(s) 57, 699, 1724
BseSI GKGCMC 3 cut(s) 303, 352, 664
BseXI GCAGC 7 cut(s) 447, 538, 838, 841, 931, 1204, 1423
BseYI CCCAGC 1 cut(s) 1295
BsgI GTGCAG 3 cut(s) 615, 1203, 1422
BshFI GGCC 2 cut(s) 469, 1524
BshNI GGYRCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 156
BshVI ATCGAT 1 cut(s) 1121
BsiHKAI GWGCWC 3 cut(s) 303, 664, 700
BsiHKCI CYCGRG 1 cut(s) 1238
BsiSI CCGG 2 cut(s) 157, 1525
BslFI GGGAC 2 cut(s) 204, 636
BslI CCNNNNNNNGG 6 cut(s) 137, 163, 206, 479, 1525, 1531
BsmAI GTCTC 3 cut(s) 900, 1375, 1655
BsmBI CGTCTC 1 cut(s) 900
BsmFI GGGAC 2 cut(s) 204, 636
BsmI GAATGC 1 cut(s) 1679
BsnI GGCC 2 cut(s) 469, 1524
BsoBI CYCGRG 1 cut(s) 1238
Bsp119I TTCGAA 1 cut(s) 715
Bsp1286I GDGCHC 5 cut(s) 128, 303, 352, 664, 700
Bsp143I GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
BspACI CCGC 3 cut(s) 1094, 1141, 1395
BspANI GGCC 2 cut(s) 469, 1524
BspCNI CTCAG 6 cut(s) 424, 961, 1045, 1581, 1651, 1748
BspDI ATCGAT 1 cut(s) 1121
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 2 cut(s) 309, 351
BspPI GGATC 3 cut(s) 532, 538, 1242
BspQI GCTCTTC 2 cut(s) 60, 807
BspT104I TTCGAA 1 cut(s) 715
BspT107I GGYRCC 1 cut(s) 349
BsrDI GCAATG 2 cut(s) 1477, 1643
BsrFI RCCGGY 1 cut(s) 156
BsrI ACTGG 5 cut(s) 25, 594, 657, 669, 889
BssAI RCCGGY 1 cut(s) 156
BssECI CCNNGG 3 cut(s) 357, 807, 1519
BssMI GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
BssNAI GTATAC 1 cut(s) 1001
BssNI GRCGYC 1 cut(s) 273
BssSI CACGAG 1 cut(s) 1623
BssT1I CCWWGG 1 cut(s) 807
Bst1107I GTATAC 1 cut(s) 1001
Bst2BI CACGAG 1 cut(s) 1623
Bst2UI CCWGG 3 cut(s) 474, 1403, 1520
Bst4CI ACNGT 8 cut(s) 47, 181, 358, 496, 695, 1132, 1507, 1666
Bst6I CTCTTC 6 cut(s) 18, 60, 66, 807, 1264, 1320
BstACI GRCGYC 1 cut(s) 273
BstAPI GCANNNNNTGC 2 cut(s) 551, 668
BstBI TTCGAA 1 cut(s) 715
BstC8I GCNNGC 6 cut(s) 595, 834, 902, 967, 1009, 1145
BstDSI CCRYGG 1 cut(s) 357
BstENI CCTNNNNNAGG 1 cut(s) 477
BstF5I GGATG 8 cut(s) 270, 440, 625, 673, 1035, 1204, 1249, 1327
BstHHI GCGC 1 cut(s) 1204
BstKTI GATC 7 cut(s) 136, 406, 533, 540, 1237, 1562, 1597
BstMAI GTCTC 3 cut(s) 900, 1375, 1655
BstMBI GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
BstMWI GCNNNNNNNGC 7 cut(s) 466, 551, 668, 823, 950, 1361, 1521
BstNI CCWGG 3 cut(s) 474, 1403, 1520
BstNSI RCATGY 3 cut(s) 549, 969, 1147
BstSCI CCNGG 4 cut(s) 472, 1401, 1518, 1524
BstSLI GKGCMC 3 cut(s) 303, 352, 664
BstV1I GCAGC 7 cut(s) 447, 538, 838, 841, 931, 1204, 1423
BstV2I GAAGAC 2 cut(s) 210, 1259
BstX2I RGATCY 2 cut(s) 537, 1234
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 2 cut(s) 537, 1234
BstZ17I GTATAC 1 cut(s) 1001
Bsu15I ATCGAT 1 cut(s) 1121
BsuRI GGCC 2 cut(s) 469, 1524
BsuTUI ATCGAT 1 cut(s) 1121
BtgI CCRYGG 1 cut(s) 357
BtsCI GGATG 8 cut(s) 270, 440, 625, 673, 1035, 1204, 1249, 1327
BtsI GCAGTG 1 cut(s) 977
BtsIMutI CAGTG 5 cut(s) 662, 700, 977, 1656, 1671
Cac8I GCNNGC 6 cut(s) 595, 834, 902, 967, 1009, 1145
CciI TCATGA 1 cut(s) 85
CfoI GCGC 1 cut(s) 1204
Cfr10I RCCGGY 1 cut(s) 156
Cfr13I GGNCC 4 cut(s) 308, 467, 907, 1522
ClaI ATCGAT 1 cut(s) 1121
CseI GACGC 1 cut(s) 281
Csp6I GTAC 3 cut(s) 650, 1138, 1702
CspAI ACCGGT 1 cut(s) 156
CspCI CAANNNNNGTGG 2 cut(s) 480, 515
CviQI GTAC 3 cut(s) 650, 1138, 1702
DpnI GATC 7 cut(s) 135, 405, 532, 539, 1236, 1561, 1596
DpnII GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
Eam1104I CTCTTC 6 cut(s) 18, 60, 66, 807, 1264, 1320
EarI CTCTTC 6 cut(s) 18, 60, 66, 807, 1264, 1320
Eco130I CCWWGG 1 cut(s) 807
Eco24I GRGCYC 1 cut(s) 128
Eco47I GGWCC 2 cut(s) 308, 907
Eco57I CTGAAG 3 cut(s) 1004, 1068, 1475
Eco88I CYCGRG 1 cut(s) 1238
EcoNI CCTNNNNNAGG 1 cut(s) 477
EcoO109I RGGNCCY 1 cut(s) 308
EcoRII CCWGG 3 cut(s) 472, 1401, 1518
EcoT14I CCWWGG 1 cut(s) 807
EcoT22I ATGCAT 2 cut(s) 1149, 1681
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 1 cut(s) 807
Esp3I CGTCTC 1 cut(s) 900
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 2 cut(s) 204, 636
FauNDI CATATG 1 cut(s) 1224
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 2 cut(s) 29, 1000
Fnu4HI GCNGC 7 cut(s) 461, 552, 827, 830, 945, 1218, 1437
FokI GGATG 8 cut(s) 277, 427, 612, 680, 1022, 1191, 1256, 1334
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 7 cut(s) 461, 552, 827, 830, 945, 1218, 1437
FspBI CTAG 2 cut(s) 230, 771
GlaI GCGC 1 cut(s) 1203
GluI GCNGC 7 cut(s) 461, 552, 827, 830, 945, 1218, 1437
GsaI CCCAGC 1 cut(s) 1299
HaeIII GGCC 2 cut(s) 469, 1524
HapII CCGG 2 cut(s) 157, 1525
HgaI GACGC 1 cut(s) 281
HhaI GCGC 1 cut(s) 1204
Hin1I GRCGYC 1 cut(s) 273
Hin6I GCGC 1 cut(s) 1202
HinP1I GCGC 1 cut(s) 1202
HincII GTYRAC 2 cut(s) 571, 873
HindII GTYRAC 2 cut(s) 571, 873
HinfI GANTC 5 cut(s) 10, 167, 799, 1268, 1383
HpaII CCGG 2 cut(s) 157, 1525
HphI GGTGA 4 cut(s) 120, 1361, 1417, 1730
Hpy166II GTNNAC 8 cut(s) 30, 154, 301, 571, 638, 662, 873, 1001
Hpy188I TCNGA 5 cut(s) 319, 414, 1411, 1590, 1738
Hpy188III TCNNGA 9 cut(s) 17, 86, 200, 784, 993, 1039, 1238, 1501, 1684
Hpy8I GTNNAC 8 cut(s) 30, 154, 301, 571, 638, 662, 873, 1001
HpyAV CCTTC 6 cut(s) 262, 361, 721, 1286, 1312, 1626
HpyCH4III ACNGT 8 cut(s) 47, 181, 358, 496, 695, 1132, 1507, 1666
HpyCH4IV ACGT 4 cut(s) 195, 526, 634, 1611
HpyF10VI GCNNNNNNNGC 7 cut(s) 466, 551, 668, 823, 950, 1361, 1521
HpySE526I ACGT 4 cut(s) 195, 526, 634, 1611
Hsp92I GRCGYC 1 cut(s) 273
HspAI GCGC 1 cut(s) 1202
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
LguI GCTCTTC 2 cut(s) 60, 807
LmnI GCTCC 2 cut(s) 1177, 1711
Lsp1109I GCAGC 7 cut(s) 447, 538, 838, 841, 931, 1204, 1423
LweI GCATC 6 cut(s) 409, 658, 899, 1113, 1213, 1666
MaeI CTAG 2 cut(s) 230, 771
MaeII ACGT 4 cut(s) 195, 526, 634, 1611
MaeIII GTNAC 6 cut(s) 250, 373, 838, 1301, 1618, 1652
MalI GATC 7 cut(s) 135, 405, 532, 539, 1236, 1561, 1596
MboI GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
MfeI CAATTG 1 cut(s) 284
MflI RGATCY 2 cut(s) 537, 1234
MhlI GDGCHC 5 cut(s) 128, 303, 352, 664, 700
MluCI AATT 6 cut(s) 284, 324, 504, 930, 1284, 1419
MlyI GAGTC 3 cut(s) 4, 161, 1377
MmeI TCCRAC 1 cut(s) 1055
Mph1103I ATGCAT 2 cut(s) 1149, 1681
MseI TTAA 6 cut(s) 161, 212, 323, 390, 749, 1197
MslI CAYNNNNRTG 2 cut(s) 494, 1209
MspI CCGG 2 cut(s) 157, 1525
MspR9I CCNGG 4 cut(s) 474, 1403, 1520, 1526
MunI CAATTG 1 cut(s) 284
Mva1269I GAATGC 1 cut(s) 1679
MvaI CCWGG 3 cut(s) 474, 1403, 1520
MwoI GCNNNNNNNGC 7 cut(s) 466, 551, 668, 823, 950, 1361, 1521
NciI CCSGG 1 cut(s) 1526
NdeI CATATG 1 cut(s) 1224
NdeII GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
NlaIV GGNNCC 2 cut(s) 309, 351
NmuCI GTSAC 5 cut(s) 250, 373, 838, 1301, 1652
NsiI ATGCAT 2 cut(s) 1149, 1681
NspI RCATGY 3 cut(s) 549, 969, 1147
NspV TTCGAA 1 cut(s) 715
OliI CACNNNNGTG 1 cut(s) 494
PaeI GCATGC 2 cut(s) 969, 1147
PaeR7I CTCGAG 1 cut(s) 1238
PagI TCATGA 1 cut(s) 85
PciSI GCTCTTC 2 cut(s) 60, 807
PctI GAATGC 1 cut(s) 1679
PfeI GAWTC 2 cut(s) 799, 1268
PfoI TCCNGGA 1 cut(s) 472
PinAI ACCGGT 1 cut(s) 156
PkrI GCNGC 7 cut(s) 462, 553, 828, 831, 946, 1219, 1438
PleI GAGTC 3 cut(s) 4, 161, 1377
PpsI GAGTC 3 cut(s) 4, 161, 1377
PpuMI RGGWCCY 1 cut(s) 308
Psp5II RGGWCCY 1 cut(s) 308
Psp6I CCWGG 3 cut(s) 472, 1401, 1518
PspFI CCCAGC 1 cut(s) 1295
PspGI CCWGG 3 cut(s) 472, 1401, 1518
PspN4I GGNNCC 2 cut(s) 309, 351
PspPI GGNCC 4 cut(s) 308, 467, 907, 1522
PspPPI RGGWCCY 1 cut(s) 308
PsuI RGATCY 2 cut(s) 537, 1234
RsaI GTAC 3 cut(s) 651, 1139, 1703
RsaNI GTAC 3 cut(s) 650, 1138, 1702
RseI CAYNNNNRTG 2 cut(s) 494, 1209
SapI GCTCTTC 2 cut(s) 60, 807
SaqAI TTAA 6 cut(s) 161, 212, 323, 390, 749, 1197
SatI GCNGC 7 cut(s) 461, 552, 827, 830, 945, 1218, 1437
Sau3AI GATC 7 cut(s) 133, 403, 530, 537, 1234, 1559, 1594
Sau96I GGNCC 4 cut(s) 308, 467, 907, 1522
ScaI AGTACT 2 cut(s) 651, 1703
SchI GAGTC 3 cut(s) 4, 161, 1377
ScrFI CCNGG 4 cut(s) 474, 1403, 1520, 1526
SduI GDGCHC 5 cut(s) 128, 303, 352, 664, 700
SfaNI GCATC 6 cut(s) 409, 658, 899, 1113, 1213, 1666
Sfr274I CTCGAG 1 cut(s) 1238
SfuI TTCGAA 1 cut(s) 715
SinI GGWCC 2 cut(s) 308, 907
SlaI CTCGAG 1 cut(s) 1238
SmiMI CAYNNNNRTG 2 cut(s) 494, 1209
SmlI CTYRAG 4 cut(s) 17, 645, 956, 1238
SmoI CTYRAG 4 cut(s) 17, 645, 956, 1238
SphI GCATGC 2 cut(s) 969, 1147
Sse9I AATT 6 cut(s) 284, 324, 504, 930, 1284, 1419
SsiI CCGC 3 cut(s) 1094, 1141, 1395
SspI AATATT 1 cut(s) 562
SspMI CTAG 2 cut(s) 230, 771
StyD4I CCNGG 4 cut(s) 472, 1401, 1518, 1524
StyI CCWWGG 1 cut(s) 807
TaaI ACNGT 8 cut(s) 47, 181, 358, 496, 695, 1132, 1507, 1666
TaiI ACGT 4 cut(s) 198, 529, 637, 1614
TaqI TCGA 6 cut(s) 715, 1121, 1239, 1502, 1509, 1558
TasI AATT 6 cut(s) 284, 324, 504, 930, 1284, 1419
TatI WGTACW 2 cut(s) 649, 1701
TfiI GAWTC 2 cut(s) 799, 1268
Tru1I TTAA 6 cut(s) 161, 212, 323, 390, 749, 1197
Tru9I TTAA 6 cut(s) 161, 212, 323, 390, 749, 1197
TscAI CASTG 5 cut(s) 669, 700, 984, 1663, 1671
TseFI GTSAC 5 cut(s) 250, 373, 838, 1301, 1652
TseI GCWGC 7 cut(s) 460, 551, 826, 829, 944, 1217, 1436
Tsp45I GTSAC 5 cut(s) 250, 373, 838, 1301, 1652
TspGWI ACGGA 1 cut(s) 222
TspRI CASTG 5 cut(s) 669, 700, 984, 1663, 1671
VneI GTGCAC 2 cut(s) 299, 660
VpaK11BI GGWCC 2 cut(s) 308, 907
XagI CCTNNNNNAGG 1 cut(s) 477
XceI RCATGY 3 cut(s) 549, 969, 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XhoI CTCGAG 1 cut(s) 1238
XmiI GTMKAC 2 cut(s) 29, 1000
XspI CTAG 2 cut(s) 230, 771
ZrmI AGTACT 2 cut(s) 651, 1703
Zsp2I ATGCAT 2 cut(s) 1149, 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.