Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Forward (+)

729830 .. 731565

Gene Structure 1736 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGTATAAGTGGAATCTTCCTTACCGAAAAGATGACGTGGAGACCGGCCGTGAAGGCGGTGAGAGATCTCTGTATCCGACTATGCTTGAGAGCCCCGAACTCCGATGGGGTTTCATCAGAAAGGTATATTCCATAATCGCATTCCAGCTTTTAGCAACCATCGCCGTCGCCTCCACGGTGGTTTTTGTCCGTCCGATCGCCGTGTTCTTCGCCACTACTAGTGCCGGTCTCGCTCTCTGGATTGTCTTAATCATCACGCCTCTTATAGTAATGTGTCCTTTGTACTATTACCACCAGAAACATCCAGTGAATTATTTGCTTCTAGGGATTTTCACGGTAGCTTTGGCTTTCGCCGTCGGATTAACATGTGCTTTCACCAGCGGGAAAGTGATTCTTGAGGCAGCGATTTTGACAACAGTAGTGGTGCTTTCCTTAACCGTCTACACCTTTTGGGCAGCAAAGAAAGGATATGACTTTAACTTCCTCGGTCCATTCTTGTTTGGTGCTCTCATCGTTCTCATGGTCTTTGCCCTTATTCAGATTTTCTTCCCGTTGGGACGGATCTCAGTGATGATCTATGGATGTTTGGCTGCGATAATATTCTGCGGGTACATAGTTTACGATACAGACAATCTCATCAAACGTTACAGCTACGATGAGTATATTTGGGCAGCAGTTTCGCTCTACTTAGATATTATCAACCTCTTCTTGGCTCTCCTTACCATTTTCAGAGCTGCCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

247

Amino Acids

27.88

Weight (kDa)

8.26

Isoelectric Point (pI)

23.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	37 - 243	1.1e-50	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	441
AciI	CCGC	3 cut(s)	57, 381, 606
AclI	AACGTT	1 cut(s)	643
AclWI	GGATC	1 cut(s)	569
AcoI	YGGCCR	1 cut(s)	46
AfaI	GTAC	2 cut(s)	284, 611
AfiI	CCNNNNNNNGG	1 cut(s)	709
AflIII	ACRYGT	1 cut(s)	365
AhlI	ACTAGT	1 cut(s)	218
AjiI	CACGTC	1 cut(s)	37
AluBI	AGCT	4 cut(s)	148, 341, 651, 734
AluI	AGCT	4 cut(s)	148, 341, 651, 734
Alw21I	GWGCWC	1 cut(s)	508
Alw26I	GTCTC	2 cut(s)	35, 233
AlwI	GGATC	1 cut(s)	569
AoxI	GGCC	1 cut(s)	46
ApeKI	GCWGC	5 cut(s)	401, 455, 590, 671, 734
AspS9I	GGNCC	1 cut(s)	488
AsuHPI	GGTGA	2 cut(s)	71, 367
AvaII	GGWCC	1 cut(s)	488
BanII	GRGCYC	1 cut(s)	95
Bbv12I	GWGCWC	1 cut(s)	508
BbvI	GCAGC	5 cut(s)	413, 467, 577, 683, 721
BccI	CCATC	2 cut(s)	99, 167
BceAI	ACGGC	4 cut(s)	33, 149, 185, 338
BcgI	CGANNNNNNTGC	2 cut(s)	660, 694
BciVI	GTATCC	1 cut(s)	84
BcoDI	GTCTC	2 cut(s)	35, 233
BcuI	ACTAGT	1 cut(s)	218
BfaI	CTAG	2 cut(s)	219, 323
BfuI	GTATCC	1 cut(s)	84
BglI	GCCNNNNNGGC	1 cut(s)	54
BglII	AGATCT	1 cut(s)	65
BisI	GCNGC	5 cut(s)	402, 456, 591, 672, 735
BlsI	GCNGC	5 cut(s)	403, 457, 592, 673, 736
Bme18I	GGWCC	1 cut(s)	488
BmgBI	CACGTC	1 cut(s)	37
BmgT120I	GGNCC	1 cut(s)	488
BpuEI	CTTGAG	2 cut(s)	107, 416
BsaI	GGTCTC	2 cut(s)	35, 233
BsaJI	CCNNGG	2 cut(s)	174, 484
Bsc4I	CCNNNNNNNGG	1 cut(s)	709
Bse118I	RCCGGY	2 cut(s)	44, 224
Bse1I	ACTGG	1 cut(s)	305
BseDI	CCNNGG	2 cut(s)	174, 484
BseGI	GGATG	2 cut(s)	301, 587
BseLI	CCNNNNNNNGG	1 cut(s)	709
BseMII	CTCAG	1 cut(s)	579
BseNI	ACTGG	1 cut(s)	305
BseX3I	CGGCCG	1 cut(s)	46
BseXI	GCAGC	5 cut(s)	413, 467, 577, 683, 721
Bsh1285I	CGRYCG	2 cut(s)	49, 198
BshFI	GGCC	1 cut(s)	48
BsiEI	CGRYCG	2 cut(s)	49, 198
BsiHKAI	GWGCWC	1 cut(s)	508
BsiSI	CCGG	2 cut(s)	45, 225
BslFI	GGGAC	1 cut(s)	570
BslI	CCNNNNNNNGG	1 cut(s)	709
BsmAI	GTCTC	2 cut(s)	35, 233
BsmFI	GGGAC	1 cut(s)	570
BsmI	GAATGC	1 cut(s)	140
BsnI	GGCC	1 cut(s)	48
Bso31I	GGTCTC	2 cut(s)	35, 233
Bsp1286I	GDGCHC	2 cut(s)	95, 508
Bsp143I	GATC	4 cut(s)	65, 195, 561, 573
BspACI	CCGC	3 cut(s)	57, 381, 606
BspANI	GGCC	1 cut(s)	48
BspCNI	CTCAG	1 cut(s)	578
BspPI	GGATC	4 cut(s)	140, 569, 592, 719
BspTNI	GGTCTC	2 cut(s)	35, 233
BsrFI	RCCGGY	2 cut(s)	44, 224
BsrI	ACTGG	1 cut(s)	305
BssAI	RCCGGY	2 cut(s)	44, 224
BssECI	CCNNGG	2 cut(s)	174, 484
BssMI	GATC	4 cut(s)	65, 195, 561, 573
Bst4CI	ACNGT	4 cut(s)	178, 337, 418, 439
Bst6I	CTCTTC	1 cut(s)	710
BstDEI	CTNAG	2 cut(s)	565, 688
BstDSI	CCRYGG	1 cut(s)	174
BstF5I	GGATG	2 cut(s)	301, 587
BstKTI	GATC	4 cut(s)	68, 198, 564, 576
BstMAI	GTCTC	2 cut(s)	35, 233
BstMBI	GATC	4 cut(s)	65, 195, 561, 573
BstMCI	CGRYCG	2 cut(s)	49, 198
BstMWI	GCNNNNNNNGC	3 cut(s)	54, 161, 230
BstNSI	RCATGY	1 cut(s)	369
BstV1I	GCAGC	5 cut(s)	413, 467, 577, 683, 721
BstX2I	RGATCY	2 cut(s)	65, 561
BstYI	RGATCY	2 cut(s)	65, 561
BstZI	CGGCCG	1 cut(s)	46
BsuI	GTATCC	1 cut(s)	84
BsuRI	GGCC	1 cut(s)	48
BtgI	CCRYGG	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	145
BtrI	CACGTC	1 cut(s)	37
BtsCI	GGATG	2 cut(s)	301, 587
BtsIMutI	CAGTG	2 cut(s)	312, 573
Cfr10I	RCCGGY	2 cut(s)	44, 224
Cfr13I	GGNCC	1 cut(s)	488
Csp6I	GTAC	2 cut(s)	283, 610
CspCI	CAANNNNNGTGG	2 cut(s)	402, 437
CviAII	CATG	2 cut(s)	366, 520
CviJI	RGCY	9 cut(s)	48, 93, 148, 341, 347, 590, 651, 713, 734
CviKI_1	RGCY	9 cut(s)	48, 93, 148, 341, 347, 590, 651, 713, 734
CviQI	GTAC	2 cut(s)	283, 610
DdeI	CTNAG	2 cut(s)	565, 688
DpnI	GATC	4 cut(s)	67, 197, 563, 575
DpnII	GATC	4 cut(s)	65, 195, 561, 573
EaeI	YGGCCR	1 cut(s)	46
EagI	CGGCCG	1 cut(s)	46
Eam1104I	CTCTTC	1 cut(s)	710
EarI	CTCTTC	1 cut(s)	710
EclXI	CGGCCG	1 cut(s)	46
Eco24I	GRGCYC	1 cut(s)	95
Eco31I	GGTCTC	2 cut(s)	35, 233
Eco47I	GGWCC	1 cut(s)	488
Eco52I	CGGCCG	1 cut(s)	46
EcoT38I	GRGCYC	1 cut(s)	95
FaeI	CATG	2 cut(s)	369, 523
FalI	AAGNNNNNCTT	2 cut(s)	378, 410
FaqI	GGGAC	1 cut(s)	570
FatI	CATG	2 cut(s)	365, 519
FauI	CCCGC	2 cut(s)	374, 599
FblI	GTMKAC	1 cut(s)	441
Fnu4HI	GCNGC	5 cut(s)	402, 456, 591, 672, 735
FokI	GGATG	2 cut(s)	288, 594
FriOI	GRGCYC	1 cut(s)	95
Fsp4HI	GCNGC	5 cut(s)	402, 456, 591, 672, 735
FspBI	CTAG	2 cut(s)	219, 323
GluI	GCNGC	5 cut(s)	402, 456, 591, 672, 735
HaeIII	GGCC	1 cut(s)	48
HapII	CCGG	2 cut(s)	45, 225
Hin1II	CATG	2 cut(s)	369, 523
HinfI	GANTC	2 cut(s)	13, 391
HpaII	CCGG	2 cut(s)	45, 225
HphI	GGTGA	2 cut(s)	71, 367
Hpy166II	GTNNAC	2 cut(s)	442, 619
Hpy188I	TCNGA	7 cut(s)	78, 104, 119, 195, 359, 540, 731
Hpy188III	TCNNGA	2 cut(s)	238, 395
Hpy8I	GTNNAC	2 cut(s)	442, 619
Hpy99I	CGWCG	2 cut(s)	170, 359
HpyAV	CCTTC	1 cut(s)	47
HpyCH4III	ACNGT	4 cut(s)	178, 337, 418, 439
HpyCH4IV	ACGT	2 cut(s)	36, 643
HpyF10VI	GCNNNNNNNGC	3 cut(s)	54, 161, 230
HpyF3I	CTNAG	2 cut(s)	565, 688
HpySE526I	ACGT	2 cut(s)	36, 643
Hsp92II	CATG	2 cut(s)	369, 523
Kzo9I	GATC	4 cut(s)	65, 195, 561, 573
LpnPI	CCDG	7 cut(s)	58, 158, 223, 238, 308, 318, 391
Lsp1109I	GCAGC	5 cut(s)	413, 467, 577, 683, 721
MaeI	CTAG	2 cut(s)	219, 323
MaeII	ACGT	2 cut(s)	36, 643
MaeIII	GTNAC	1 cut(s)	644
MalI	GATC	4 cut(s)	67, 197, 563, 575
MboI	GATC	4 cut(s)	65, 195, 561, 573
MboII	GAAGA	4 cut(s)	8, 199, 538, 697
MflI	RGATCY	2 cut(s)	65, 561
MhlI	GDGCHC	2 cut(s)	95, 508
MluCI	AATT	1 cut(s)	310
MmeI	TCCRAC	2 cut(s)	101, 337
MnlI	CCTC	5 cut(s)	181, 270, 391, 494, 713
MseI	TTAA	4 cut(s)	248, 362, 434, 477
MspA1I	CMGCKG	1 cut(s)	381
MspI	CCGG	2 cut(s)	45, 225
Mva1269I	GAATGC	1 cut(s)	140
MwoI	GCNNNNNNNGC	3 cut(s)	54, 161, 230
NdeII	GATC	4 cut(s)	65, 195, 561, 573
NlaIII	CATG	2 cut(s)	369, 523
NspI	RCATGY	1 cut(s)	369
PciI	ACATGT	1 cut(s)	365
PctI	GAATGC	1 cut(s)	140
PfeI	GAWTC	2 cut(s)	13, 391
PkrI	GCNGC	5 cut(s)	403, 457, 592, 673, 736
Ple19I	CGATCG	1 cut(s)	198
PscI	ACATGT	1 cut(s)	365
Psp1406I	AACGTT	1 cut(s)	643
PspPI	GGNCC	1 cut(s)	488
PsuI	RGATCY	2 cut(s)	65, 561
PvuI	CGATCG	1 cut(s)	198
RsaI	GTAC	2 cut(s)	284, 611
RsaNI	GTAC	2 cut(s)	283, 610
SaqAI	TTAA	4 cut(s)	248, 362, 434, 477
SatI	GCNGC	5 cut(s)	402, 456, 591, 672, 735
Sau3AI	GATC	4 cut(s)	65, 195, 561, 573
Sau96I	GGNCC	1 cut(s)	488
SduI	GDGCHC	2 cut(s)	95, 508
SetI	ASST	9 cut(s)	39, 126, 150, 343, 449, 646, 653, 705, 736
SinI	GGWCC	1 cut(s)	488
SmlI	CTYRAG	2 cut(s)	86, 395
SmoI	CTYRAG	2 cut(s)	86, 395
SpeI	ACTAGT	1 cut(s)	218
Sse9I	AATT	1 cut(s)	310
SsiI	CCGC	3 cut(s)	57, 381, 606
SspI	AATATT	1 cut(s)	600
SspMI	CTAG	2 cut(s)	219, 323
TaaI	ACNGT	4 cut(s)	178, 337, 418, 439
TaiI	ACGT	2 cut(s)	39, 646
TaqII	GACCGA	1 cut(s)	476
TasI	AATT	1 cut(s)	310
TatI	WGTACW	1 cut(s)	282
TfiI	GAWTC	2 cut(s)	13, 391
Tru1I	TTAA	4 cut(s)	248, 362, 434, 477
Tru9I	TTAA	4 cut(s)	248, 362, 434, 477
TscAI	CASTG	2 cut(s)	312, 573
TseI	GCWGC	5 cut(s)	401, 455, 590, 671, 734
TspDTI	ATGAA	1 cut(s)	103
TspGWI	ACGGA	2 cut(s)	179, 574
TspRI	CASTG	2 cut(s)	312, 573
VpaK11BI	GGWCC	1 cut(s)	488
XceI	RCATGY	1 cut(s)	369
XmiI	GTMKAC	1 cut(s)	441
XspI	CTAG	2 cut(s)	219, 323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.