Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Reverse (-)

23387718 .. 23389038

Gene Structure 1321 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G63310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 720 bp

ATGTGGAATCAGAAGCATGATTTGGAGTCGGCTCAGACGCCTCTCTACCCGATGATGTCGGAGAGCCCGGAGCTCCGATGGTCTTTCATCCGCAAGGTCTATTCCATCATCTCCATCCAGCTGCTCGTTACAATCGCCGTCGCTGCCACCGTCGTTAAGGTTCATTCTATTTCTGTATTCTTCACCACCACCACCGCCGGCTTCGCTCTCTACATACTTCTTATATTGACTCCATTGATCGTTATGTGTCCTTTGTATTACTATCACCAGAAGCACCCTGTGAACTATCTGTTACTCGGGATTTTCACCGTCGCTCTTGCCTTTGCGGTTGGCTTGACCTGCGCCTTTACAAGCGGGAAGGTGATTCTGGAATCTGTGATTTTGACCGCTGTTGTGGTCATATCCCTCACTCTATACACTTTCTGGGCGGCCAAAAGAGGCCATGACTTCAACTTCCTCGGACCTTTCTTGTTCGGTGCTGTCATTGTCCTCATGGTGTTTTCCTTCATCCAGATTCTCTTCCCTTTAGGAAAGATCTCTGTGATGATCTATGGTTGTTTGGCATCCATCATCTTCTGTGGCTACATTGTATATGATACCGACAACTTGATCAAGAGGCACTCCTATGACGAGTACATCTGGGCTGCTGTTTCTCTTTATTTGGATGTCATTAATCTCTTCCTATCTCTCCTCACTCTCTTAAGGGCTGTTGATAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

239

Amino Acids

26.91

Weight (kDa)

7.69

Isoelectric Point (pI)

27.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	28 - 234	2e-50	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	347
AciI	CCGC	6 cut(s)	91, 195, 326, 354, 387, 428
AcoI	YGGCCR	1 cut(s)	429
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	280
AfaI	GTAC	1 cut(s)	635
AflII	CTTAAG	1 cut(s)	700
AgsI	TTSAA	1 cut(s)	451
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
AluBI	AGCT	2 cut(s)	73, 121
AluI	AGCT	2 cut(s)	73, 121
Alw21I	GWGCWC	1 cut(s)	75
Ama87I	CYCGRG	1 cut(s)	296
AoxI	GGCC	2 cut(s)	429, 439
ApeKI	GCWGC	3 cut(s)	121, 143, 644
AseI	ATTAAT	1 cut(s)	672
AspLEI	GCGC	1 cut(s)	344
AspS9I	GGNCC	1 cut(s)	461
AsuC2I	CCSGG	1 cut(s)	68
AsuHPI	GGTGA	4 cut(s)	175, 257, 298, 373
AvaI	CYCGRG	1 cut(s)	296
AvaII	GGWCC	1 cut(s)	461
BanII	GRGCYC	2 cut(s)	68, 75
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	3 cut(s)	108, 130, 631
BccI	CCATC	4 cut(s)	72, 113, 122, 575
BceAI	ACGGC	1 cut(s)	122
BclI	TGATCA	1 cut(s)	609
BcnI	CCSGG	1 cut(s)	68
BfrI	CTTAAG	1 cut(s)	700
BfuAI	ACCTGC	1 cut(s)	347
BglII	AGATCT	1 cut(s)	534
BisI	GCNGC	4 cut(s)	122, 144, 429, 645
BlsI	GCNGC	4 cut(s)	123, 145, 430, 646
Bme1390I	CCNGG	1 cut(s)	68
Bme18I	GGWCC	1 cut(s)	461
BmeT110I	CYCGRG	1 cut(s)	296
BmgT120I	GGNCC	1 cut(s)	461
BmrFI	CCNGG	1 cut(s)	68
BmsI	GCATC	1 cut(s)	572
BpuMI	CCSGG	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	38
BsaJI	CCNNGG	1 cut(s)	457
Bse118I	RCCGGY	1 cut(s)	197
BseDI	CCNNGG	1 cut(s)	457
BseGI	GGATG	5 cut(s)	87, 114, 507, 563, 670
BseMII	CTCAG	1 cut(s)	47
BseRI	GAGGAG	1 cut(s)	680
BseXI	GCAGC	3 cut(s)	108, 130, 631
BshFI	GGCC	2 cut(s)	431, 441
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	1 cut(s)	296
BsiSI	CCGG	2 cut(s)	68, 198
BsnI	GGCC	2 cut(s)	431, 441
BsoBI	CYCGRG	1 cut(s)	296
Bsp1286I	GDGCHC	2 cut(s)	68, 75
Bsp143I	GATC	4 cut(s)	237, 534, 546, 609
BspACI	CCGC	6 cut(s)	91, 195, 326, 354, 387, 428
BspANI	GGCC	2 cut(s)	431, 441
BspCNI	CTCAG	1 cut(s)	46
BspMI	ACCTGC	1 cut(s)	347
BspTI	CTTAAG	1 cut(s)	700
BsrFI	RCCGGY	1 cut(s)	197
BssAI	RCCGGY	1 cut(s)	197
BssECI	CCNNGG	1 cut(s)	457
BssMI	GATC	4 cut(s)	237, 534, 546, 609
BssNI	GRCGYC	1 cut(s)	38
Bst4CI	ACNGT	2 cut(s)	151, 310
Bst6I	CTCTTC	2 cut(s)	524, 683
BstACI	GRCGYC	1 cut(s)	38
BstAFI	CTTAAG	1 cut(s)	700
BstC8I	GCNNGC	1 cut(s)	199
BstDEI	CTNAG	1 cut(s)	33
BstF5I	GGATG	5 cut(s)	87, 114, 507, 563, 670
BstHHI	GCGC	1 cut(s)	344
BstKTI	GATC	4 cut(s)	240, 537, 549, 612
BstMBI	GATC	4 cut(s)	237, 534, 546, 609
BstMWI	GCNNNNNNNGC	3 cut(s)	143, 203, 339
BstSCI	CCNGG	1 cut(s)	66
BstV1I	GCAGC	3 cut(s)	108, 130, 631
BstX2I	RGATCY	1 cut(s)	534
BstYI	RGATCY	1 cut(s)	534
BsuRI	GGCC	2 cut(s)	431, 441
BtsCI	GGATG	5 cut(s)	87, 114, 507, 563, 670
BveI	ACCTGC	1 cut(s)	347
Cac8I	GCNNGC	1 cut(s)	199
CfoI	GCGC	1 cut(s)	344
Cfr10I	RCCGGY	1 cut(s)	197
Cfr13I	GGNCC	1 cut(s)	461
CseI	GACGC	1 cut(s)	46
Csp6I	GTAC	1 cut(s)	634
CviAII	CATG	3 cut(s)	17, 443, 493
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	1 cut(s)	33
DpnI	GATC	4 cut(s)	239, 536, 548, 611
DpnII	GATC	4 cut(s)	237, 534, 546, 609
DraIII	CACNNNGTG	1 cut(s)	280
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	2 cut(s)	524, 683
EarI	CTCTTC	2 cut(s)	524, 683
Ecl136II	GAGCTC	1 cut(s)	73
Eco24I	GRGCYC	2 cut(s)	68, 75
Eco47I	GGWCC	1 cut(s)	461
Eco53kI	GAGCTC	1 cut(s)	73
Eco88I	CYCGRG	1 cut(s)	296
EcoICRI	GAGCTC	1 cut(s)	73
EcoT38I	GRGCYC	2 cut(s)	68, 75
FaeI	CATG	3 cut(s)	20, 446, 496
FatI	CATG	3 cut(s)	16, 442, 492
FauI	CCCGC	1 cut(s)	347
FbaI	TGATCA	1 cut(s)	609
Fnu4HI	GCNGC	4 cut(s)	122, 144, 429, 645
FokI	GGATG	5 cut(s)	74, 101, 494, 550, 677
FriOI	GRGCYC	2 cut(s)	68, 75
Fsp4HI	GCNGC	4 cut(s)	122, 144, 429, 645
GlaI	GCGC	1 cut(s)	343
GluI	GCNGC	4 cut(s)	122, 144, 429, 645
HaeIII	GGCC	2 cut(s)	431, 441
HapII	CCGG	2 cut(s)	68, 198
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	1 cut(s)	344
Hin1I	GRCGYC	1 cut(s)	38
Hin1II	CATG	3 cut(s)	20, 446, 496
Hin6I	GCGC	1 cut(s)	342
HinP1I	GCGC	1 cut(s)	342
HinfI	GANTC	6 cut(s)	7, 26, 229, 364, 371, 514
HpaII	CCGG	2 cut(s)	68, 198
HphI	GGTGA	4 cut(s)	175, 257, 298, 373
Hpy166II	GTNNAC	1 cut(s)	283
Hpy188I	TCNGA	5 cut(s)	12, 36, 61, 77, 461
Hpy188III	TCNNGA	4 cut(s)	298, 368, 511, 613
Hpy8I	GTNNAC	1 cut(s)	283
Hpy99I	CGWCG	3 cut(s)	143, 155, 314
HpyAV	CCTTC	2 cut(s)	352, 514
HpyCH4III	ACNGT	2 cut(s)	151, 310
HpyF10VI	GCNNNNNNNGC	3 cut(s)	143, 203, 339
HpyF3I	CTNAG	1 cut(s)	33
Hsp92I	GRCGYC	1 cut(s)	38
Hsp92II	CATG	3 cut(s)	20, 446, 496
HspAI	GCGC	1 cut(s)	342
KroI	GCCGGC	1 cut(s)	197
KroNI	GCCGGC	1 cut(s)	199
Ksp22I	TGATCA	1 cut(s)	609
Kzo9I	GATC	4 cut(s)	237, 534, 546, 609
LmnI	GCTCC	2 cut(s)	70, 78
Lsp1109I	GCAGC	3 cut(s)	108, 130, 631
LweI	GCATC	1 cut(s)	572
MaeIII	GTNAC	2 cut(s)	127, 291
MalI	GATC	4 cut(s)	239, 536, 548, 611
MboI	GATC	4 cut(s)	237, 534, 546, 609
MboII	GAAGA	4 cut(s)	172, 511, 565, 670
MflI	RGATCY	1 cut(s)	534
MhlI	GDGCHC	2 cut(s)	68, 75
MlyI	GAGTC	2 cut(s)	35, 223
MmeI	TCCRAC	1 cut(s)	39
MnlI	CCTC	7 cut(s)	51, 416, 431, 467, 500, 609, 701
MroNI	GCCGGC	1 cut(s)	197
MseI	TTAA	3 cut(s)	156, 672, 701
MslI	CAYNNNNRTG	1 cut(s)	624
MspA1I	CMGCKG	2 cut(s)	121, 389
MspCI	CTTAAG	1 cut(s)	700
MspI	CCGG	2 cut(s)	68, 198
MspR9I	CCNGG	1 cut(s)	68
MwoI	GCNNNNNNNGC	3 cut(s)	143, 203, 339
NaeI	GCCGGC	1 cut(s)	199
NciI	CCSGG	1 cut(s)	68
NdeII	GATC	4 cut(s)	237, 534, 546, 609
NgoMIV	GCCGGC	1 cut(s)	197
NlaIII	CATG	3 cut(s)	20, 446, 496
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PdiI	GCCGGC	1 cut(s)	199
PfeI	GAWTC	4 cut(s)	7, 364, 371, 514
PkrI	GCNGC	4 cut(s)	123, 145, 430, 646
PleI	GAGTC	2 cut(s)	34, 223
PpsI	GAGTC	2 cut(s)	34, 223
PshBI	ATTAAT	1 cut(s)	672
Psp124BI	GAGCTC	1 cut(s)	75
PspPI	GGNCC	1 cut(s)	461
PsuI	RGATCY	1 cut(s)	534
PvuII	CAGCTG	1 cut(s)	121
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
RseI	CAYNNNNRTG	1 cut(s)	624
SacI	GAGCTC	1 cut(s)	75
SaqAI	TTAA	3 cut(s)	156, 672, 701
SatI	GCNGC	4 cut(s)	122, 144, 429, 645
Sau3AI	GATC	4 cut(s)	237, 534, 546, 609
Sau96I	GGNCC	1 cut(s)	461
SchI	GAGTC	2 cut(s)	35, 223
ScrFI	CCNGG	1 cut(s)	68
SduI	GDGCHC	2 cut(s)	68, 75
SetI	ASST	7 cut(s)	75, 99, 123, 162, 341, 363, 466
SfaNI	GCATC	1 cut(s)	572
SinI	GGWCC	1 cut(s)	461
SmiMI	CAYNNNNRTG	1 cut(s)	624
SmlI	CTYRAG	1 cut(s)	700
SmoI	CTYRAG	1 cut(s)	700
SsiI	CCGC	6 cut(s)	91, 195, 326, 354, 387, 428
SstI	GAGCTC	1 cut(s)	75
StyD4I	CCNGG	1 cut(s)	66
TaaI	ACNGT	2 cut(s)	151, 310
TatI	WGTACW	1 cut(s)	633
TauI	GCSGC	1 cut(s)	431
TfiI	GAWTC	4 cut(s)	7, 364, 371, 514
Tru1I	TTAA	3 cut(s)	156, 672, 701
Tru9I	TTAA	3 cut(s)	156, 672, 701
TseI	GCWGC	3 cut(s)	121, 143, 644
TspDTI	ATGAA	3 cut(s)	76, 152, 496
Vha464I	CTTAAG	1 cut(s)	700
VpaK11BI	GGWCC	1 cut(s)	461
VspI	ATTAAT	1 cut(s)	672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.