Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Forward (+)

34622808 .. 34624704

Gene Structure 1897 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1259200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 738 bp

ATGAATATGATGTGGAATCAGGCGTATCGGAAGAGTGATCCGGAGGCCCAAGCAAGGCCGCTCTACCCTACGATGCTCGAGAGCCCCGAGCTCCGGTGGTCCTTCATCCGCAAAATCTACGCGATCGTTGCCATGCAATTACTCGCCACCATCGCCATCGGCGCCGTTGTCGTTTCGGTCCGGCCGGTGGCTCACTTCTTTGTCAGCACCGGCGCCGGCCTTGCTCTCTACATTGTTCTCATCATCACGCCTTTCATCGTGCTGTGCCCGCTGTACTACTACCACCAGAAGCATCCGGTGAATTATCTTTTACTTGGAATTTTTACCCTCTCACTGGCATGTGTGGTCGGTTTGACTTGTGCATTTACTAGCGGGAAGGTGATTTTGGAGTCTGTTATTCTAACGGCAGTGGTCGTAATCGGTTTGACCTTGTACACATTCTGGGCTGCAAAGAGAGGCCATGACTTCAACTTTCTTGGTCCCTTCTTGGCTGGAGCTATTTTGGTTCTCTTCGTATTTGCTCTGATTCAGATTTTGTTCCCGTTGGGTAGGATCTCCGTGATGATATATGGTTGCTTGGCGTCGCTCATATTTTGCGGGTACATTGTGTACGACACGGACAACTTGATCAAGCGATACTCTTACGACGAGTACATTTGGGCAGCAGTCGCTTTGTATTTGGATATCATCAACCTCTTCCTCGCGCTTCTCACCGTTTTCAGGGTTTCTGATAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

246

Amino Acids

27.53

Weight (kDa)

8.76

Isoelectric Point (pI)

25.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	34 - 240	3.1e-47	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	161, 212
AccBSI	CCGCTC	1 cut(s)	61
AccII	CGCG	2 cut(s)	122, 704
AccIII	TCCGGA	1 cut(s)	40
AciI	CCGC	5 cut(s)	59, 109, 269, 372, 597
AclWI	GGATC	2 cut(s)	32, 560
AcoI	YGGCCR	1 cut(s)	182
AcsI	RAATTY	1 cut(s)	318
AcyI	GRCGYC	3 cut(s)	162, 213, 581
AfaI	GTAC	5 cut(s)	275, 434, 602, 611, 653
AfiI	CCNNNNNNNGG	5 cut(s)	54, 93, 187, 334, 720
AgsI	TTSAA	1 cut(s)	469
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AluBI	AGCT	2 cut(s)	91, 497
AluI	AGCT	2 cut(s)	91, 497
Alw21I	GWGCWC	1 cut(s)	93
AlwI	GGATC	2 cut(s)	32, 560
Ama87I	CYCGRG	2 cut(s)	77, 86
Aor13HI	TCCGGA	1 cut(s)	40
AoxI	GGCC	5 cut(s)	45, 56, 182, 217, 457
ApeKI	GCWGC	2 cut(s)	446, 662
ApoI	RAATTY	1 cut(s)	318
AspLEI	GCGC	3 cut(s)	164, 215, 706
AspS9I	GGNCC	4 cut(s)	46, 99, 178, 479
AsuHPI	GGTGA	3 cut(s)	310, 391, 703
AvaI	CYCGRG	2 cut(s)	77, 86
AvaII	GGWCC	3 cut(s)	99, 178, 479
BaeGI	GKGCMC	1 cut(s)	269
BanI	GGYRCC	2 cut(s)	161, 212
BanII	GRGCYC	2 cut(s)	86, 93
Bbv12I	GWGCWC	1 cut(s)	93
BbvI	GCAGC	2 cut(s)	433, 674
BccI	CCATC	2 cut(s)	158, 164
BceAI	ACGGC	2 cut(s)	149, 420
BclI	TGATCA	1 cut(s)	627
BfaI	CTAG	1 cut(s)	369
BfoI	RGCGCY	2 cut(s)	165, 216
BisI	GCNGC	3 cut(s)	59, 447, 663
BlsI	GCNGC	3 cut(s)	60, 448, 664
Bme18I	GGWCC	3 cut(s)	99, 178, 479
BmeT110I	CYCGRG	2 cut(s)	77, 86
BmgT120I	GGNCC	4 cut(s)	46, 99, 178, 479
BmiI	GGNNCC	3 cut(s)	163, 214, 481
BmsI	GCATC	2 cut(s)	63, 301
BpmI	CTGGAG	1 cut(s)	513
BsaHI	GRCGYC	3 cut(s)	162, 213, 581
BsaWI	WCCGGW	3 cut(s)	40, 93, 295
Bsc4I	CCNNNNNNNGG	5 cut(s)	54, 93, 187, 334, 720
Bse118I	RCCGGY	3 cut(s)	184, 209, 215
Bse1I	ACTGG	1 cut(s)	339
BseAI	TCCGGA	1 cut(s)	40
BseGI	GGATG	2 cut(s)	105, 292
BseLI	CCNNNNNNNGG	5 cut(s)	54, 93, 187, 334, 720
BseNI	ACTGG	1 cut(s)	339
BseSI	GKGCMC	1 cut(s)	269
BseX3I	CGGCCG	1 cut(s)	182
BseXI	GCAGC	2 cut(s)	433, 674
Bsh1236I	CGCG	2 cut(s)	122, 704
Bsh1285I	CGRYCG	2 cut(s)	126, 185
BshFI	GGCC	5 cut(s)	47, 58, 184, 219, 459
BshNI	GGYRCC	2 cut(s)	161, 212
BsiEI	CGRYCG	2 cut(s)	126, 185
BsiHKAI	GWGCWC	1 cut(s)	93
BsiHKCI	CYCGRG	2 cut(s)	77, 86
BsiSI	CCGG	7 cut(s)	41, 94, 181, 185, 210, 216, 296
BslFI	GGGAC	1 cut(s)	465
BslI	CCNNNNNNNGG	5 cut(s)	54, 93, 187, 334, 720
BsmFI	GGGAC	1 cut(s)	465
BsnI	GGCC	5 cut(s)	47, 58, 184, 219, 459
BsoBI	CYCGRG	2 cut(s)	77, 86
Bsp1286I	GDGCHC	3 cut(s)	86, 93, 269
Bsp13I	TCCGGA	1 cut(s)	40
Bsp1407I	TGTACA	1 cut(s)	432
Bsp143I	GATC	4 cut(s)	37, 123, 552, 627
BspACI	CCGC	5 cut(s)	59, 109, 269, 372, 597
BspANI	GGCC	5 cut(s)	47, 58, 184, 219, 459
BspEI	TCCGGA	1 cut(s)	40
BspFNI	CGCG	2 cut(s)	122, 704
BspLI	GGNNCC	3 cut(s)	163, 214, 481
BspPI	GGATC	2 cut(s)	32, 560
BspT107I	GGYRCC	2 cut(s)	161, 212
BsrBI	CCGCTC	1 cut(s)	61
BsrFI	RCCGGY	3 cut(s)	184, 209, 215
BsrGI	TGTACA	1 cut(s)	432
BsrI	ACTGG	1 cut(s)	339
BssAI	RCCGGY	3 cut(s)	184, 209, 215
BssMI	GATC	4 cut(s)	37, 123, 552, 627
BssNI	GRCGYC	3 cut(s)	162, 213, 581
Bst4CI	ACNGT	1 cut(s)	715
Bst6I	CTCTTC	3 cut(s)	26, 515, 701
BstACI	GRCGYC	3 cut(s)	162, 213, 581
BstAUI	TGTACA	1 cut(s)	432
BstC8I	GCNNGC	2 cut(s)	217, 269
BstF5I	GGATG	2 cut(s)	105, 292
BstFNI	CGCG	2 cut(s)	122, 704
BstH2I	RGCGCY	2 cut(s)	165, 216
BstHHI	GCGC	3 cut(s)	164, 215, 706
BstKTI	GATC	4 cut(s)	40, 126, 555, 630
BstMBI	GATC	4 cut(s)	37, 123, 552, 627
BstMCI	CGRYCG	2 cut(s)	126, 185
BstMWI	GCNNNNNNNGC	6 cut(s)	128, 152, 161, 221, 268, 668
BstNSI	RCATGY	1 cut(s)	342
BstSLI	GKGCMC	1 cut(s)	269
BstUI	CGCG	2 cut(s)	122, 704
BstV1I	GCAGC	2 cut(s)	433, 674
BstX2I	RGATCY	1 cut(s)	552
BstYI	RGATCY	1 cut(s)	552
BstZI	CGGCCG	1 cut(s)	182
BsuRI	GGCC	5 cut(s)	47, 58, 184, 219, 459
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	2 cut(s)	105, 292
BtsI	GCAGTG	1 cut(s)	414
BtsIMutI	CAGTG	2 cut(s)	332, 414
Cac8I	GCNNGC	2 cut(s)	217, 269
CfoI	GCGC	3 cut(s)	164, 215, 706
Cfr10I	RCCGGY	3 cut(s)	184, 209, 215
Cfr13I	GGNCC	4 cut(s)	46, 99, 178, 479
CpoI	CGGWCCG	1 cut(s)	178
CseI	GACGC	1 cut(s)	570
Csp6I	GTAC	5 cut(s)	274, 433, 601, 610, 652
CspI	CGGWCCG	1 cut(s)	178
CviAII	CATG	3 cut(s)	133, 339, 461
CviQI	GTAC	5 cut(s)	274, 433, 601, 610, 652
DinI	GGCGCC	2 cut(s)	163, 214
DpnI	GATC	4 cut(s)	39, 125, 554, 629
DpnII	GATC	4 cut(s)	37, 123, 552, 627
EaeI	YGGCCR	1 cut(s)	182
EagI	CGGCCG	1 cut(s)	182
Eam1104I	CTCTTC	3 cut(s)	26, 515, 701
EarI	CTCTTC	3 cut(s)	26, 515, 701
Ecl136II	GAGCTC	1 cut(s)	91
EclXI	CGGCCG	1 cut(s)	182
Eco24I	GRGCYC	2 cut(s)	86, 93
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	3 cut(s)	99, 178, 479
Eco52I	CGGCCG	1 cut(s)	182
Eco53kI	GAGCTC	1 cut(s)	91
Eco88I	CYCGRG	2 cut(s)	77, 86
EcoICRI	GAGCTC	1 cut(s)	91
EcoRV	GATATC	1 cut(s)	685
EcoT38I	GRGCYC	2 cut(s)	86, 93
EgeI	GGCGCC	2 cut(s)	163, 214
EheI	GGCGCC	2 cut(s)	163, 214
FaeI	CATG	3 cut(s)	136, 342, 464
FaiI	YATR	7 cut(s)	8, 134, 340, 462, 568, 570, 590
FaqI	GGGAC	1 cut(s)	465
FatI	CATG	3 cut(s)	132, 338, 460
FauI	CCCGC	3 cut(s)	276, 365, 590
FbaI	TGATCA	1 cut(s)	627
Fnu4HI	GCNGC	3 cut(s)	59, 447, 663
FokI	GGATG	2 cut(s)	92, 279
FriOI	GRGCYC	2 cut(s)	86, 93
Fsp4HI	GCNGC	3 cut(s)	59, 447, 663
FspBI	CTAG	1 cut(s)	369
GlaI	GCGC	3 cut(s)	163, 214, 705
GluI	GCNGC	3 cut(s)	59, 447, 663
GsuI	CTGGAG	1 cut(s)	513
HaeII	RGCGCY	2 cut(s)	165, 216
HaeIII	GGCC	5 cut(s)	47, 58, 184, 219, 459
HapII	CCGG	7 cut(s)	41, 94, 181, 185, 210, 216, 296
HgaI	GACGC	1 cut(s)	570
HhaI	GCGC	3 cut(s)	164, 215, 706
Hin1I	GRCGYC	3 cut(s)	162, 213, 581
Hin1II	CATG	3 cut(s)	136, 342, 464
Hin6I	GCGC	3 cut(s)	162, 213, 704
HinP1I	GCGC	3 cut(s)	162, 213, 704
HinfI	GANTC	3 cut(s)	16, 389, 526
HpaII	CCGG	7 cut(s)	41, 94, 181, 185, 210, 216, 296
HphI	GGTGA	3 cut(s)	310, 391, 703
Hpy166II	GTNNAC	2 cut(s)	435, 610
Hpy188I	TCNGA	4 cut(s)	30, 525, 531, 730
Hpy188III	TCNNGA	2 cut(s)	41, 79
Hpy8I	GTNNAC	2 cut(s)	435, 610
Hpy99I	CGWCG	2 cut(s)	586, 650
HpyAV	CCTTC	3 cut(s)	112, 370, 493
HpyCH4III	ACNGT	1 cut(s)	715
HpyCH4V	TGCA	3 cut(s)	136, 362, 449
HpyF10VI	GCNNNNNNNGC	6 cut(s)	128, 152, 161, 221, 268, 668
Hsp92I	GRCGYC	3 cut(s)	162, 213, 581
Hsp92II	CATG	3 cut(s)	136, 342, 464
HspAI	GCGC	3 cut(s)	162, 213, 704
KasI	GGCGCC	2 cut(s)	161, 212
Kpn2I	TCCGGA	1 cut(s)	40
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	627
Kzo9I	GATC	4 cut(s)	37, 123, 552, 627
LmnI	GCTCC	2 cut(s)	96, 494
Lsp1109I	GCAGC	2 cut(s)	433, 674
LweI	GCATC	2 cut(s)	63, 301
MaeI	CTAG	1 cut(s)	369
MalI	GATC	4 cut(s)	39, 125, 554, 629
MbiI	CCGCTC	1 cut(s)	61
MboI	GATC	4 cut(s)	37, 123, 552, 627
MboII	GAAGA	3 cut(s)	43, 502, 688
MflI	RGATCY	1 cut(s)	552
MhlI	GDGCHC	3 cut(s)	86, 93, 269
MluCI	AATT	3 cut(s)	137, 301, 318
Mly113I	GGCGCC	2 cut(s)	162, 213
MlyI	GAGTC	1 cut(s)	398
MnlI	CCTC	5 cut(s)	37, 338, 449, 704, 710
MroI	TCCGGA	1 cut(s)	40
MroNI	GCCGGC	1 cut(s)	215
MslI	CAYNNNNRTG	1 cut(s)	337
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	7 cut(s)	41, 94, 181, 185, 210, 216, 296
MvnI	CGCG	2 cut(s)	122, 704
MwoI	GCNNNNNNNGC	6 cut(s)	128, 152, 161, 221, 268, 668
NaeI	GCCGGC	1 cut(s)	217
NarI	GGCGCC	2 cut(s)	162, 213
NdeII	GATC	4 cut(s)	37, 123, 552, 627
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	3 cut(s)	136, 342, 464
NlaIV	GGNNCC	3 cut(s)	163, 214, 481
NspI	RCATGY	1 cut(s)	342
PaeR7I	CTCGAG	1 cut(s)	77
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PdiI	GCCGGC	1 cut(s)	217
PfeI	GAWTC	2 cut(s)	16, 526
PkrI	GCNGC	3 cut(s)	60, 448, 664
Ple19I	CGATCG	1 cut(s)	126
PleI	GAGTC	1 cut(s)	397
PluTI	GGCGCC	2 cut(s)	165, 216
PpsI	GAGTC	1 cut(s)	397
Psp124BI	GAGCTC	1 cut(s)	93
PspN4I	GGNNCC	3 cut(s)	163, 214, 481
PspPI	GGNCC	4 cut(s)	46, 99, 178, 479
PsuI	RGATCY	1 cut(s)	552
PvuI	CGATCG	1 cut(s)	126
RsaI	GTAC	5 cut(s)	275, 434, 602, 611, 653
RsaNI	GTAC	5 cut(s)	274, 433, 601, 610, 652
RseI	CAYNNNNRTG	1 cut(s)	337
Rsr2I	CGGWCCG	1 cut(s)	178
RsrII	CGGWCCG	1 cut(s)	178
SacI	GAGCTC	1 cut(s)	93
SatI	GCNGC	3 cut(s)	59, 447, 663
Sau3AI	GATC	4 cut(s)	37, 123, 552, 627
Sau96I	GGNCC	4 cut(s)	46, 99, 178, 479
SchI	GAGTC	1 cut(s)	398
SduI	GDGCHC	3 cut(s)	86, 93, 269
SetI	ASST	5 cut(s)	93, 381, 431, 499, 696
SfaNI	GCATC	2 cut(s)	63, 301
SfoI	GGCGCC	2 cut(s)	163, 214
Sfr274I	CTCGAG	1 cut(s)	77
SgrAI	CRCCGGYG	1 cut(s)	209
SinI	GGWCC	3 cut(s)	99, 178, 479
SlaI	CTCGAG	1 cut(s)	77
SmiMI	CAYNNNNRTG	1 cut(s)	337
SmlI	CTYRAG	1 cut(s)	77
SmoI	CTYRAG	1 cut(s)	77
Sse9I	AATT	3 cut(s)	137, 301, 318
SsiI	CCGC	5 cut(s)	59, 109, 269, 372, 597
SspDI	GGCGCC	2 cut(s)	161, 212
SspMI	CTAG	1 cut(s)	369
SstI	GAGCTC	1 cut(s)	93
TaaI	ACNGT	1 cut(s)	715
TaqI	TCGA	1 cut(s)	78
TaqII	GACCGA	1 cut(s)	166
TasI	AATT	3 cut(s)	137, 301, 318
TatI	WGTACW	3 cut(s)	273, 432, 651
TauI	GCSGC	1 cut(s)	61
TfiI	GAWTC	2 cut(s)	16, 526
TscAI	CASTG	2 cut(s)	339, 414
TseI	GCWGC	2 cut(s)	446, 662
TspDTI	ATGAA	3 cut(s)	17, 94, 244
TspGWI	ACGGA	2 cut(s)	547, 632
TspRI	CASTG	2 cut(s)	339, 414
VpaK11BI	GGWCC	3 cut(s)	99, 178, 479
XapI	RAATTY	1 cut(s)	318
XceI	RCATGY	1 cut(s)	342
XhoI	CTCGAG	1 cut(s)	77
XspI	CTAG	1 cut(s)	369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.