Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Forward (+)

1185751 .. 1187816

Gene Structure 2066 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G02690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGTATCAGTGGAACTTACCGTACCGGAAAGATGACGTGGAAACAGGCGTTAGCTCAAGAAGGCCTTTACTATACCCAGCGATGCATGAAAATCCCGAGCTCCGGTGGGGATTTATACGCAAGGTCTACTCTATAATCGCCTTTCAGCTTCTAGCCACCGTCGCTGTCGCTGCCACGGTGGTCACCGTCCGTCCAATCGCTCTGTTCTTCGCCACCACCGGACTTGGATTAGCTCTTTACATAGTCATCATCATCACACCTCTCATAGTGTTGTGTCCGTTGTACTATTACCATCAGAAACATCCGGTGAATTACTTGCTCTTGGGGATTTTCACTTTGGCTCTGGCTTTTGTTGTTGGATTAACATGTGCCTTCACCAATGGGAAAGTGATTCTCGAGTCAGTGATCTTGACATCGGTAGTGGTGCTTTCGCTCACATTATATACTTTTTGGGCTGCTAGGAAAGGATATGACTTTAATTTCCTTGGACCCTTCTTGTTTGGCGCTCTCACCGTGCTTATTTTCTTCGCCTTAATACAAATTTTGTTCCCATTAGGGAGGGTATCAGTGATGATCTATGGTTGTTTGGTATCGATAATATTCTGCGGATACATAGTTTACGATACAGACAATCTGATCAAGAGACACACGTATGATGAGTATATTTGGGCAGCGGTTTCACTCTACCTAGACATCATCAACCTCTTCTTGTATCTTCTTACTGTGTTGAGAGCCTTACAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

248

Amino Acids

28.22

Weight (kDa)

8.97

Isoelectric Point (pI)

28.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	67 - 204	1e-32	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	126
AciI	CCGC	2 cut(s)	606, 674
AcsI	RAATTY	1 cut(s)	540
AfaI	GTAC	2 cut(s)	23, 284
AfiI	CCNNNNNNNGG	1 cut(s)	102
AflIII	ACRYGT	2 cut(s)	365, 648
AjiI	CACGTC	1 cut(s)	37
AluBI	AGCT	4 cut(s)	54, 100, 148, 233
AluI	AGCT	4 cut(s)	54, 100, 148, 233
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	1 cut(s)	637
Ama87I	CYCGRG	2 cut(s)	95, 395
AoxI	GGCC	1 cut(s)	62
ApeKI	GCWGC	3 cut(s)	170, 455, 671
ApoI	RAATTY	1 cut(s)	540
AspLEI	GCGC	1 cut(s)	506
AspS9I	GGNCC	1 cut(s)	488
AsuHPI	GGTGA	4 cut(s)	175, 319, 367, 502
AvaI	CYCGRG	2 cut(s)	95, 395
AvaII	GGWCC	1 cut(s)	488
BanII	GRGCYC	1 cut(s)	102
Bbv12I	GWGCWC	1 cut(s)	102
BbvI	GCAGC	3 cut(s)	157, 442, 683
BccI	CCATC	1 cut(s)	300
BciVI	GTATCC	1 cut(s)	602
BclI	TGATCA	1 cut(s)	636
BcoDI	GTCTC	1 cut(s)	637
BfaI	CTAG	3 cut(s)	152, 459, 689
BfoI	RGCGCY	1 cut(s)	507
BfuI	GTATCC	1 cut(s)	602
BisI	GCNGC	3 cut(s)	171, 456, 672
BlsI	GCNGC	3 cut(s)	172, 457, 673
Bme18I	GGWCC	1 cut(s)	488
BmeT110I	CYCGRG	2 cut(s)	95, 395
BmgBI	CACGTC	1 cut(s)	37
BmgT120I	GGNCC	1 cut(s)	488
BmiI	GGNNCC	1 cut(s)	490
BmsI	GCATC	1 cut(s)	72
BpuEI	CTTGAG	1 cut(s)	40
Bsa29I	ATCGAT	1 cut(s)	593
BsaAI	YACGTR	1 cut(s)	651
BsaJI	CCNNGG	2 cut(s)	174, 484
BsaWI	WCCGGW	4 cut(s)	24, 102, 218, 304
Bsc4I	CCNNNNNNNGG	1 cut(s)	102
BseCI	ATCGAT	1 cut(s)	593
BseDI	CCNNGG	2 cut(s)	174, 484
BseGI	GGATG	1 cut(s)	301
BseLI	CCNNNNNNNGG	1 cut(s)	102
BseXI	GCAGC	3 cut(s)	157, 442, 683
BseYI	CCCAGC	1 cut(s)	76
BshFI	GGCC	1 cut(s)	64
BshVI	ATCGAT	1 cut(s)	593
BsiHKAI	GWGCWC	1 cut(s)	102
BsiHKCI	CYCGRG	2 cut(s)	95, 395
BsiSI	CCGG	4 cut(s)	25, 103, 219, 305
BslI	CCNNNNNNNGG	1 cut(s)	102
BsmAI	GTCTC	1 cut(s)	637
BsnI	GGCC	1 cut(s)	64
BsoBI	CYCGRG	2 cut(s)	95, 395
Bsp1286I	GDGCHC	1 cut(s)	102
Bsp143I	GATC	3 cut(s)	405, 573, 636
BspACI	CCGC	2 cut(s)	606, 674
BspANI	GGCC	1 cut(s)	64
BspDI	ATCGAT	1 cut(s)	593
BspLI	GGNNCC	1 cut(s)	490
BssECI	CCNNGG	2 cut(s)	174, 484
BssMI	GATC	3 cut(s)	405, 573, 636
BssT1I	CCWWGG	1 cut(s)	484
Bst4CI	ACNGT	6 cut(s)	21, 160, 178, 187, 514, 724
Bst6I	CTCTTC	1 cut(s)	710
BstBAI	YACGTR	1 cut(s)	651
BstDSI	CCRYGG	1 cut(s)	174
BstEII	GGTNACC	1 cut(s)	181
BstF5I	GGATG	1 cut(s)	301
BstH2I	RGCGCY	1 cut(s)	507
BstHHI	GCGC	1 cut(s)	506
BstKTI	GATC	3 cut(s)	408, 576, 639
BstMAI	GTCTC	1 cut(s)	637
BstMBI	GATC	3 cut(s)	405, 573, 636
BstMWI	GCNNNNNNNGC	2 cut(s)	161, 170
BstNSI	RCATGY	1 cut(s)	369
BstPI	GGTNACC	1 cut(s)	181
BstV1I	GCAGC	3 cut(s)	157, 442, 683
Bsu15I	ATCGAT	1 cut(s)	593
BsuI	GTATCC	1 cut(s)	602
BsuRI	GGCC	1 cut(s)	64
BsuTUI	ATCGAT	1 cut(s)	593
BtgI	CCRYGG	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	95
BtrI	CACGTC	1 cut(s)	37
BtsCI	GGATG	1 cut(s)	301
BtsIMutI	CAGTG	3 cut(s)	14, 408, 573
CfoI	GCGC	1 cut(s)	506
Cfr13I	GGNCC	1 cut(s)	488
ClaI	ATCGAT	1 cut(s)	593
Csp6I	GTAC	2 cut(s)	22, 283
CspCI	CAANNNNNGTGG	2 cut(s)	205, 240
CviAII	CATG	2 cut(s)	86, 366
CviQI	GTAC	2 cut(s)	22, 283
DpnI	GATC	3 cut(s)	407, 575, 638
DpnII	GATC	3 cut(s)	405, 573, 636
Eam1104I	CTCTTC	1 cut(s)	710
EarI	CTCTTC	1 cut(s)	710
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	484
Eco147I	AGGCCT	1 cut(s)	64
Eco24I	GRGCYC	1 cut(s)	102
Eco47I	GGWCC	1 cut(s)	488
Eco53kI	GAGCTC	1 cut(s)	100
Eco88I	CYCGRG	2 cut(s)	95, 395
Eco91I	GGTNACC	1 cut(s)	181
EcoICRI	GAGCTC	1 cut(s)	100
EcoO65I	GGTNACC	1 cut(s)	181
EcoT14I	CCWWGG	1 cut(s)	484
EcoT22I	ATGCAT	1 cut(s)	87
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	1 cut(s)	484
FaeI	CATG	2 cut(s)	89, 369
FalI	AAGNNNNNCTT	2 cut(s)	49, 81
FatI	CATG	2 cut(s)	85, 365
FbaI	TGATCA	1 cut(s)	636
FblI	GTMKAC	1 cut(s)	126
Fnu4HI	GCNGC	3 cut(s)	171, 456, 672
FokI	GGATG	1 cut(s)	288
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	3 cut(s)	171, 456, 672
FspBI	CTAG	3 cut(s)	152, 459, 689
GlaI	GCGC	1 cut(s)	505
GluI	GCNGC	3 cut(s)	171, 456, 672
GsaI	CCCAGC	1 cut(s)	80
HaeII	RGCGCY	1 cut(s)	507
HaeIII	GGCC	1 cut(s)	64
HapII	CCGG	4 cut(s)	25, 103, 219, 305
HhaI	GCGC	1 cut(s)	506
Hin1II	CATG	2 cut(s)	89, 369
Hin6I	GCGC	1 cut(s)	504
HinP1I	GCGC	1 cut(s)	504
HinfI	GANTC	2 cut(s)	391, 398
HpaII	CCGG	4 cut(s)	25, 103, 219, 305
HphI	GGTGA	4 cut(s)	175, 319, 367, 502
Hpy166II	GTNNAC	2 cut(s)	127, 619
Hpy188I	TCNGA	2 cut(s)	297, 636
Hpy188III	TCNNGA	5 cut(s)	57, 95, 395, 409, 640
Hpy8I	GTNNAC	2 cut(s)	127, 619
Hpy99I	CGWCG	1 cut(s)	164
HpyAV	CCTTC	3 cut(s)	54, 382, 502
HpyCH4III	ACNGT	6 cut(s)	21, 160, 178, 187, 514, 724
HpyCH4IV	ACGT	2 cut(s)	36, 650
HpyCH4V	TGCA	1 cut(s)	85
HpyF10VI	GCNNNNNNNGC	2 cut(s)	161, 170
HpySE526I	ACGT	2 cut(s)	36, 650
Hsp92II	CATG	2 cut(s)	89, 369
HspAI	GCGC	1 cut(s)	504
Ksp22I	TGATCA	1 cut(s)	636
Kzo9I	GATC	3 cut(s)	405, 573, 636
LmnI	GCTCC	1 cut(s)	105
LpnPI	CCDG	7 cut(s)	30, 38, 90, 116, 232, 318, 329
Lsp1109I	GCAGC	3 cut(s)	157, 442, 683
LweI	GCATC	1 cut(s)	72
MaeI	CTAG	3 cut(s)	152, 459, 689
MaeII	ACGT	2 cut(s)	36, 650
MaeIII	GTNAC	1 cut(s)	181
MalI	GATC	3 cut(s)	407, 575, 638
MboI	GATC	3 cut(s)	405, 573, 636
MboII	GAAGA	4 cut(s)	199, 517, 697, 707
MhlI	GDGCHC	1 cut(s)	102
MluCI	AATT	3 cut(s)	310, 478, 540
MlyI	GAGTC	1 cut(s)	407
MmeI	TCCRAC	1 cut(s)	337
MnlI	CCTC	3 cut(s)	270, 552, 713
Mph1103I	ATGCAT	1 cut(s)	87
MseI	TTAA	3 cut(s)	362, 477, 533
MslI	CAYNNNNRTG	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	674
MspI	CCGG	4 cut(s)	25, 103, 219, 305
MwoI	GCNNNNNNNGC	2 cut(s)	161, 170
NdeII	GATC	3 cut(s)	405, 573, 636
NlaIII	CATG	2 cut(s)	89, 369
NlaIV	GGNNCC	1 cut(s)	490
NmuCI	GTSAC	1 cut(s)	181
NsiI	ATGCAT	1 cut(s)	87
NspI	RCATGY	1 cut(s)	369
PaeR7I	CTCGAG	1 cut(s)	395
PceI	AGGCCT	1 cut(s)	64
PciI	ACATGT	1 cut(s)	365
PfeI	GAWTC	1 cut(s)	391
PkrI	GCNGC	3 cut(s)	172, 457, 673
PleI	GAGTC	1 cut(s)	406
PpsI	GAGTC	1 cut(s)	406
Ppu21I	YACGTR	1 cut(s)	651
PscI	ACATGT	1 cut(s)	365
Psp124BI	GAGCTC	1 cut(s)	102
PspEI	GGTNACC	1 cut(s)	181
PspFI	CCCAGC	1 cut(s)	76
PspN4I	GGNNCC	1 cut(s)	490
PspPI	GGNCC	1 cut(s)	488
PsrI	GAACNNNNNNTAC	1 cut(s)	37
RsaI	GTAC	2 cut(s)	23, 284
RsaNI	GTAC	2 cut(s)	22, 283
RseI	CAYNNNNRTG	1 cut(s)	651
SacI	GAGCTC	1 cut(s)	102
SaqAI	TTAA	3 cut(s)	362, 477, 533
SatI	GCNGC	3 cut(s)	171, 456, 672
Sau3AI	GATC	3 cut(s)	405, 573, 636
Sau96I	GGNCC	1 cut(s)	488
SchI	GAGTC	1 cut(s)	407
SduI	GDGCHC	1 cut(s)	102
SfaNI	GCATC	1 cut(s)	72
Sfr274I	CTCGAG	1 cut(s)	395
SinI	GGWCC	1 cut(s)	488
SlaI	CTCGAG	1 cut(s)	395
SmiMI	CAYNNNNRTG	1 cut(s)	651
SmlI	CTYRAG	2 cut(s)	55, 395
SmoI	CTYRAG	2 cut(s)	55, 395
Sse9I	AATT	3 cut(s)	310, 478, 540
SseBI	AGGCCT	1 cut(s)	64
SsiI	CCGC	2 cut(s)	606, 674
SspI	AATATT	1 cut(s)	600
SspMI	CTAG	3 cut(s)	152, 459, 689
SstI	GAGCTC	1 cut(s)	102
StuI	AGGCCT	1 cut(s)	64
StyI	CCWWGG	1 cut(s)	484
TaaI	ACNGT	6 cut(s)	21, 160, 178, 187, 514, 724
TaiI	ACGT	2 cut(s)	39, 653
TaqI	TCGA	2 cut(s)	396, 593
TasI	AATT	3 cut(s)	310, 478, 540
TatI	WGTACW	1 cut(s)	282
TfiI	GAWTC	1 cut(s)	391
Tru1I	TTAA	3 cut(s)	362, 477, 533
Tru9I	TTAA	3 cut(s)	362, 477, 533
TscAI	CASTG	3 cut(s)	14, 408, 573
TseFI	GTSAC	1 cut(s)	181
TseI	GCWGC	3 cut(s)	170, 455, 671
Tsp45I	GTSAC	1 cut(s)	181
TspDTI	ATGAA	1 cut(s)	102
TspGWI	ACGGA	2 cut(s)	179, 267
TspRI	CASTG	3 cut(s)	14, 408, 573
VpaK11BI	GGWCC	1 cut(s)	488
XapI	RAATTY	1 cut(s)	540
XceI	RCATGY	1 cut(s)	369
XhoI	CTCGAG	1 cut(s)	395
XmiI	GTMKAC	1 cut(s)	126
XspI	CTAG	3 cut(s)	152, 459, 689
Zsp2I	ATGCAT	1 cut(s)	87

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.