RLG00000012236

Belongs to the BI1 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
16499916 .. 16502052
2137 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012236

Sequence Viewer

Length: 1086 bp
ATGTGGAGCCAACCCTACCGGAAAGATGACTTGGAGTCCGGATCCCGGCCGCTCTACCCCATGATGCTCGAGAGCCCCGAGCTCCGCTGGTCCTTCATCCGCAAAATCTACTCCATCATCGCCGTCCAATTGCTCGTCACCATCGCCGTCGCCGCCACAGTCGTCTCCTACCACCCGATTGCCAACTTCTTCGTCAGTACCGGCGCCGGCTTGGCCCTCTACATAGTCCTCATCATCATTCCCTTCATCGTGTTGTGCCCTCTGTACTATTACCACCAGAGGCATCCTGTGAATTACCTCCTGCTTGGGATTTTCACCATCTCTCTTGCCTTTGTGGTGGGATTGACTTGCGCTTTTACTAGCGGGAAGGTTATTTTGGAGTCTGTGATACTCACCGTTGTGGTTGTAATTGCTCTCACCCTGTACACATTTTGGGCTGCAAGGAGAGGCCATGATTTCAATTTTCTTGGTCCTTTCTTGGCTGGAGCATTGCTCGTTCTCATTGTGTTTTCTCTGATTCAGGTTTTCTTCCCTCTGGGTAAGCTCTCAGTGATGATATACGGGTGCTTGGCATCGATCATCTTTTGTGGATACATTGTGTATGACACAGACAATCTTATCAAGCGCTATTCTTACGACGAGTACATTTGGGCTGCGCTAGCCGAATCATGTGGCGAGTGGTGTTTTGCCTTCTTATTTAAACGCCAGGTTGACGACTCTGCCGTCACGATCAAGGTCATCGGGGTTCAGATACTCGCAACTCTAGCTGCAGTCGTTACCATCTTTTTGGTCAGCCAAAATAGCGGGAGAAAGATTTTAGAAGCTGCAATTCCAACCATTGCGGTTTTCACTAGTCTCACCAGACACACAATGTGCGCAATGAGGGAAGGCCATGATTTCGAATTTTATGGTCCTCTCCTGCTTTCAGGGTTGATGGATCTCGTCGGCTTCGGCCTGATCCAAGTGTTTTTCCCACTGGGTAGTGTTGCTATGATCATATACGGGAGAGTTGGACTGAGCATAGCTCCTTGCAGCATTGCGTATGCCACCAGTCACCTAATTAAGCGCCACTACGGACTTTATTGA

Protein Analysis

362

Amino Acids

40.21

Weight (kDa)

8.34

Isoelectric Point (pI)

25.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bax1-I PF01027 31 - 220 8e-40 Inhibitor of apoptosis-promoting Bax1
Bax1-I PF01027 230 - 358 3.4e-11 Inhibitor of apoptosis-promoting Bax1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 722
Acc16I TGCGCA 1 cut(s) 877
AccB1I GGYRCC 1 cut(s) 203
AccBSI CCGCTC 1 cut(s) 52
AccIII TCCGGA 1 cut(s) 38
AciI CCGC 7 cut(s) 50, 85, 100, 153, 363, 804, 842
AclWI GGATC 4 cut(s) 36, 49, 945, 952
AcoI YGGCCR 1 cut(s) 47
AcsI RAATTY 1 cut(s) 902
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 873
AfaI GTAC 4 cut(s) 199, 266, 425, 644
AfeI AGCGCT 1 cut(s) 626
AfiI CCNNNNNNNGG 1 cut(s) 45
AgsI TTSAA 1 cut(s) 460
AhdI GACNNNNNGTC 1 cut(s) 34
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 1 cut(s) 705
AjuI GAANNNNNNNTTGG 4 cut(s) 14, 46, 359, 391
AleI CACNNNNGTG 1 cut(s) 398
AluBI AGCT 5 cut(s) 82, 544, 767, 824, 1025
AluI AGCT 5 cut(s) 82, 544, 767, 824, 1025
Alw21I GWGCWC 1 cut(s) 84
Alw26I GTCTC 2 cut(s) 169, 860
AlwI GGATC 4 cut(s) 36, 49, 945, 952
Ama87I CYCGRG 2 cut(s) 68, 77
Aor13HI TCCGGA 1 cut(s) 38
Aor51HI AGCGCT 1 cut(s) 626
AoxI GGCC 5 cut(s) 47, 213, 448, 889, 952
ApeKI GCWGC 5 cut(s) 437, 653, 767, 824, 1032
ApoI RAATTY 1 cut(s) 902
AspLEI GCGC 6 cut(s) 206, 353, 627, 658, 878, 1068
AspS9I GGNCC 4 cut(s) 90, 214, 470, 911
AsuC2I CCSGG 1 cut(s) 46
AsuHPI GGTGA 6 cut(s) 130, 307, 385, 409, 850, 1046
AsuII TTCGAA 1 cut(s) 900
AsuNHI GCTAGC 1 cut(s) 658
AvaI CYCGRG 2 cut(s) 68, 77
AvaII GGWCC 3 cut(s) 90, 470, 911
BaeGI GKGCMC 1 cut(s) 260
BamHI GGATCC 1 cut(s) 41
BanI GGYRCC 1 cut(s) 203
BanII GRGCYC 2 cut(s) 77, 84
Bbv12I GWGCWC 1 cut(s) 84
BbvI GCAGC 5 cut(s) 424, 640, 754, 811, 1044
BccI CCATC 5 cut(s) 122, 149, 326, 788, 928
BceAI ACGGC 3 cut(s) 107, 131, 707
BciT130I CCWGG 1 cut(s) 707
BciVI GTATCC 1 cut(s) 584
BclI TGATCA 1 cut(s) 993
BcnI CCSGG 1 cut(s) 46
BcoDI GTCTC 2 cut(s) 169, 860
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 4 cut(s) 360, 659, 764, 852
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 3 cut(s) 207, 628, 1069
BfuI GTATCC 1 cut(s) 584
BglI GCCNNNNNGGC 1 cut(s) 212
BisI GCNGC 7 cut(s) 50, 153, 438, 654, 768, 825, 1033
BlsI GCNGC 7 cut(s) 51, 154, 439, 655, 769, 826, 1034
Bme1390I CCNGG 2 cut(s) 46, 707
Bme18I GGWCC 3 cut(s) 90, 470, 911
BmeRI GACNNNNNGTC 1 cut(s) 34
BmeT110I CYCGRG 2 cut(s) 68, 77
BmgT120I GGNCC 4 cut(s) 90, 214, 470, 911
BmiI GGNNCC 3 cut(s) 8, 43, 205
BmrFI CCNGG 2 cut(s) 46, 707
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 3 cut(s) 54, 292, 581
BmtI GCTAGC 1 cut(s) 662
BmuI ACTGGG 1 cut(s) 986
BplI GAGNNNNNCTC 4 cut(s) 477, 509, 1009, 1041
BpmI CTGGAG 1 cut(s) 504
Bpu14I TTCGAA 1 cut(s) 900
BpuMI CCSGG 1 cut(s) 46
Bsa29I ATCGAT 1 cut(s) 575
BsaHI GRCGYC 1 cut(s) 204
BsaWI WCCGGW 2 cut(s) 18, 38
Bsc4I CCNNNNNNNGG 1 cut(s) 45
Bse118I RCCGGY 2 cut(s) 200, 206
Bse1I ACTGG 2 cut(s) 981, 1050
Bse3DI GCAATG 4 cut(s) 488, 837, 885, 1035
BseAI TCCGGA 1 cut(s) 38
BseBI CCWGG 1 cut(s) 707
BseCI ATCGAT 1 cut(s) 575
BseGI GGATG 2 cut(s) 96, 283
BseLI CCNNNNNNNGG 1 cut(s) 45
BseMI GCAATG 4 cut(s) 488, 837, 885, 1035
BseMII CTCAG 2 cut(s) 561, 1007
BseNI ACTGG 2 cut(s) 981, 1050
BseSI GKGCMC 1 cut(s) 260
BseX3I CGGCCG 1 cut(s) 47
BseXI GCAGC 5 cut(s) 424, 640, 754, 811, 1044
Bsh1285I CGRYCG 1 cut(s) 50
BshFI GGCC 5 cut(s) 49, 215, 450, 891, 954
BshNI GGYRCC 1 cut(s) 203
BshVI ATCGAT 1 cut(s) 575
BsiEI CGRYCG 1 cut(s) 50
BsiHKAI GWGCWC 1 cut(s) 84
BsiHKCI CYCGRG 2 cut(s) 68, 77
BsiSI CCGG 5 cut(s) 19, 39, 46, 201, 207
BslI CCNNNNNNNGG 1 cut(s) 45
BsmAI GTCTC 2 cut(s) 169, 860
BsmBI CGTCTC 1 cut(s) 169
BsnI GGCC 5 cut(s) 49, 215, 450, 891, 954
BsoBI CYCGRG 2 cut(s) 68, 77
Bsp119I TTCGAA 1 cut(s) 900
Bsp1286I GDGCHC 3 cut(s) 77, 84, 260
Bsp13I TCCGGA 1 cut(s) 38
Bsp1407I TGTACA 1 cut(s) 423
Bsp143I GATC 6 cut(s) 41, 576, 729, 937, 957, 993
BspACI CCGC 7 cut(s) 50, 85, 100, 153, 363, 804, 842
BspANI GGCC 5 cut(s) 49, 215, 450, 891, 954
BspCNI CTCAG 2 cut(s) 560, 1008
BspDI ATCGAT 1 cut(s) 575
BspEI TCCGGA 1 cut(s) 38
BspLI GGNNCC 3 cut(s) 8, 43, 205
BspMAI CTGCAG 1 cut(s) 772
BspOI GCTAGC 1 cut(s) 662
BspPI GGATC 4 cut(s) 36, 49, 945, 952
BspT104I TTCGAA 1 cut(s) 900
BspT107I GGYRCC 1 cut(s) 203
BsrBI CCGCTC 1 cut(s) 52
BsrDI GCAATG 4 cut(s) 488, 837, 885, 1035
BsrFI RCCGGY 2 cut(s) 200, 206
BsrGI TGTACA 1 cut(s) 423
BsrI ACTGG 2 cut(s) 981, 1050
BssAI RCCGGY 2 cut(s) 200, 206
BssMI GATC 6 cut(s) 41, 576, 729, 937, 957, 993
BssNI GRCGYC 1 cut(s) 204
Bst2UI CCWGG 1 cut(s) 707
Bst4CI ACNGT 2 cut(s) 160, 397
BstACI GRCGYC 1 cut(s) 204
BstAUI TGTACA 1 cut(s) 423
BstBI TTCGAA 1 cut(s) 900
BstC8I GCNNGC 2 cut(s) 208, 660
BstDEI CTNAG 2 cut(s) 547, 1016
BstF5I GGATG 2 cut(s) 96, 283
BstH2I RGCGCY 3 cut(s) 207, 628, 1069
BstHHI GCGC 6 cut(s) 206, 353, 627, 658, 878, 1068
BstKTI GATC 6 cut(s) 44, 579, 732, 940, 960, 996
BstMAI GTCTC 2 cut(s) 169, 860
BstMBI GATC 6 cut(s) 41, 576, 729, 937, 957, 993
BstMCI CGRYCG 1 cut(s) 50
BstMWI GCNNNNNNNGC 5 cut(s) 152, 212, 659, 764, 801
BstNI CCWGG 1 cut(s) 707
BstSCI CCNGG 2 cut(s) 44, 705
BstSFI CTRYAG 1 cut(s) 768
BstSLI GKGCMC 1 cut(s) 260
BstV1I GCAGC 5 cut(s) 424, 640, 754, 811, 1044
BstX2I RGATCY 2 cut(s) 41, 937
BstXI CCANNNNNNTGG 1 cut(s) 787
BstYI RGATCY 2 cut(s) 41, 937
BstZI CGGCCG 1 cut(s) 47
Bsu15I ATCGAT 1 cut(s) 575
BsuI GTATCC 1 cut(s) 584
BsuRI GGCC 5 cut(s) 49, 215, 450, 891, 954
BsuTUI ATCGAT 1 cut(s) 575
BtgZI GCGATG 2 cut(s) 103, 127
BtsCI GGATG 2 cut(s) 96, 283
BtsIMutI CAGTG 2 cut(s) 555, 974
Cac8I GCNNGC 2 cut(s) 208, 660
CfoI GCGC 6 cut(s) 206, 353, 627, 658, 878, 1068
Cfr10I RCCGGY 2 cut(s) 200, 206
Cfr13I GGNCC 4 cut(s) 90, 214, 470, 911
ClaI ATCGAT 1 cut(s) 575
Csp6I GTAC 4 cut(s) 198, 265, 424, 643
CviAII CATG 4 cut(s) 61, 452, 669, 893
CviQI GTAC 4 cut(s) 198, 265, 424, 643
DdeI CTNAG 2 cut(s) 547, 1016
DinI GGCGCC 1 cut(s) 205
DpnI GATC 6 cut(s) 43, 578, 731, 939, 959, 995
DpnII GATC 6 cut(s) 41, 576, 729, 937, 957, 993
DraI TTTAAA 1 cut(s) 700
DraIII CACNNNGTG 1 cut(s) 873
DrdI GACNNNNNNGTC 1 cut(s) 722
DriI GACNNNNNGTC 1 cut(s) 34
DseDI GACNNNNNNGTC 1 cut(s) 722
EaeI YGGCCR 1 cut(s) 47
EagI CGGCCG 1 cut(s) 47
Eam1105I GACNNNNNGTC 1 cut(s) 34
Ecl136II GAGCTC 1 cut(s) 82
EclXI CGGCCG 1 cut(s) 47
Eco24I GRGCYC 2 cut(s) 77, 84
Eco47I GGWCC 3 cut(s) 90, 470, 911
Eco47III AGCGCT 1 cut(s) 626
Eco52I CGGCCG 1 cut(s) 47
Eco53kI GAGCTC 1 cut(s) 82
Eco88I CYCGRG 2 cut(s) 68, 77
EcoICRI GAGCTC 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 705
EcoT38I GRGCYC 2 cut(s) 77, 84
EgeI GGCGCC 1 cut(s) 205
EheI GGCGCC 1 cut(s) 205
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 4 cut(s) 64, 455, 672, 896
FatI CATG 4 cut(s) 60, 451, 668, 892
FauI CCCGC 2 cut(s) 356, 797
FbaI TGATCA 1 cut(s) 993
Fnu4HI GCNGC 7 cut(s) 50, 153, 438, 654, 768, 825, 1033
FokI GGATG 2 cut(s) 83, 270
FriOI GRGCYC 2 cut(s) 77, 84
Fsp4HI GCNGC 7 cut(s) 50, 153, 438, 654, 768, 825, 1033
FspBI CTAG 4 cut(s) 360, 659, 764, 852
FspI TGCGCA 1 cut(s) 877
GlaI GCGC 6 cut(s) 205, 352, 626, 657, 877, 1067
GluI GCNGC 7 cut(s) 50, 153, 438, 654, 768, 825, 1033
GsuI CTGGAG 1 cut(s) 504
HaeII RGCGCY 3 cut(s) 207, 628, 1069
HaeIII GGCC 5 cut(s) 49, 215, 450, 891, 954
HapII CCGG 5 cut(s) 19, 39, 46, 201, 207
HhaI GCGC 6 cut(s) 206, 353, 627, 658, 878, 1068
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 4 cut(s) 64, 455, 672, 896
Hin6I GCGC 6 cut(s) 204, 351, 625, 656, 876, 1066
HinP1I GCGC 6 cut(s) 204, 351, 625, 656, 876, 1066
HincII GTYRAC 1 cut(s) 712
HindII GTYRAC 1 cut(s) 712
HinfI GANTC 5 cut(s) 35, 380, 517, 665, 716
HpaII CCGG 5 cut(s) 19, 39, 46, 201, 207
HphI GGTGA 6 cut(s) 130, 307, 385, 409, 850, 1046
Hpy166II GTNNAC 2 cut(s) 426, 712
Hpy188I TCNGA 2 cut(s) 516, 750
Hpy188III TCNNGA 3 cut(s) 39, 70, 727
Hpy8I GTNNAC 2 cut(s) 426, 712
Hpy99I CGWCG 3 cut(s) 152, 641, 947
HpyAV CCTTC 5 cut(s) 103, 253, 361, 700, 881
HpyCH4III ACNGT 2 cut(s) 160, 397
HpyCH4V TGCA 4 cut(s) 440, 770, 827, 1032
HpyF10VI GCNNNNNNNGC 5 cut(s) 152, 212, 659, 764, 801
HpyF3I CTNAG 2 cut(s) 547, 1016
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 4 cut(s) 64, 455, 672, 896
HspAI GCGC 6 cut(s) 204, 351, 625, 656, 876, 1066
KasI GGCGCC 1 cut(s) 203
Kpn2I TCCGGA 1 cut(s) 38
KroI GCCGGC 1 cut(s) 206
KroNI GCCGGC 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 993
Kzo9I GATC 6 cut(s) 41, 576, 729, 937, 957, 993
LmnI GCTCC 4 cut(s) 6, 87, 485, 1030
Lsp1109I GCAGC 5 cut(s) 424, 640, 754, 811, 1044
LweI GCATC 3 cut(s) 54, 292, 581
MaeI CTAG 4 cut(s) 360, 659, 764, 852
MaeIII GTNAC 4 cut(s) 136, 724, 775, 1052
MalI GATC 6 cut(s) 43, 578, 731, 939, 959, 995
MbiI CCGCTC 1 cut(s) 52
MboI GATC 6 cut(s) 41, 576, 729, 937, 957, 993
MboII GAAGA 2 cut(s) 181, 520
MfeI CAATTG 1 cut(s) 128
MflI RGATCY 2 cut(s) 41, 937
MhlI GDGCHC 3 cut(s) 77, 84, 260
MluCI AATT 7 cut(s) 128, 292, 408, 460, 828, 902, 1059
Mly113I GGCGCC 1 cut(s) 204
MlyI GAGTC 3 cut(s) 44, 389, 710
MmeI TCCRAC 2 cut(s) 857, 991
MnlI CCTC 9 cut(s) 227, 239, 270, 273, 308, 440, 543, 876, 924
MroI TCCGGA 1 cut(s) 38
MroNI GCCGGC 1 cut(s) 206
MseI TTAA 2 cut(s) 699, 1062
MslI CAYNNNNRTG 1 cut(s) 398
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 5 cut(s) 19, 39, 46, 201, 207
MspR9I CCNGG 2 cut(s) 46, 707
MunI CAATTG 1 cut(s) 128
MvaI CCWGG 1 cut(s) 707
MwoI GCNNNNNNNGC 5 cut(s) 152, 212, 659, 764, 801
NaeI GCCGGC 1 cut(s) 208
NarI GGCGCC 1 cut(s) 204
NciI CCSGG 1 cut(s) 46
NdeII GATC 6 cut(s) 41, 576, 729, 937, 957, 993
NgoMIV GCCGGC 1 cut(s) 206
NheI GCTAGC 1 cut(s) 658
NlaIII CATG 4 cut(s) 64, 455, 672, 896
NlaIV GGNNCC 3 cut(s) 8, 43, 205
NmuCI GTSAC 3 cut(s) 136, 724, 1052
NsbI TGCGCA 1 cut(s) 877
NspV TTCGAA 1 cut(s) 900
OliI CACNNNNGTG 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 68
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 720
PdiI GCCGGC 1 cut(s) 208
PfeI GAWTC 2 cut(s) 517, 665
PkrI GCNGC 7 cut(s) 51, 154, 439, 655, 769, 826, 1034
PleI GAGTC 3 cut(s) 43, 388, 710
PluTI GGCGCC 1 cut(s) 207
PpsI GAGTC 3 cut(s) 43, 388, 710
Psp124BI GAGCTC 1 cut(s) 84
Psp6I CCWGG 1 cut(s) 705
PspGI CCWGG 1 cut(s) 705
PspN4I GGNNCC 3 cut(s) 8, 43, 205
PspPI GGNCC 4 cut(s) 90, 214, 470, 911
PstI CTGCAG 1 cut(s) 772
PsuI RGATCY 2 cut(s) 41, 937
RsaI GTAC 4 cut(s) 199, 266, 425, 644
RsaNI GTAC 4 cut(s) 198, 265, 424, 643
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 1 cut(s) 84
SaqAI TTAA 2 cut(s) 699, 1062
SatI GCNGC 7 cut(s) 50, 153, 438, 654, 768, 825, 1033
Sau3AI GATC 6 cut(s) 41, 576, 729, 937, 957, 993
Sau96I GGNCC 4 cut(s) 90, 214, 470, 911
SchI GAGTC 3 cut(s) 44, 389, 710
ScrFI CCNGG 2 cut(s) 46, 707
SduI GDGCHC 3 cut(s) 77, 84, 260
SfaNI GCATC 3 cut(s) 54, 292, 581
SfcI CTRYAG 1 cut(s) 768
SfoI GGCGCC 1 cut(s) 205
Sfr274I CTCGAG 1 cut(s) 68
SfuI TTCGAA 1 cut(s) 900
SinI GGWCC 3 cut(s) 90, 470, 911
SlaI CTCGAG 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 1 cut(s) 68
SmoI CTYRAG 1 cut(s) 68
SpeI ACTAGT 1 cut(s) 851
Sse9I AATT 7 cut(s) 128, 292, 408, 460, 828, 902, 1059
SsiI CCGC 7 cut(s) 50, 85, 100, 153, 363, 804, 842
SspDI GGCGCC 1 cut(s) 203
SspMI CTAG 4 cut(s) 360, 659, 764, 852
SstI GAGCTC 1 cut(s) 84
StyD4I CCNGG 2 cut(s) 44, 705
TaaI ACNGT 2 cut(s) 160, 397
TaqI TCGA 3 cut(s) 69, 575, 900
TasI AATT 7 cut(s) 128, 292, 408, 460, 828, 902, 1059
TatI WGTACW 3 cut(s) 264, 423, 642
TauI GCSGC 2 cut(s) 52, 155
TfiI GAWTC 2 cut(s) 517, 665
Tru1I TTAA 2 cut(s) 699, 1062
Tru9I TTAA 2 cut(s) 699, 1062
TscAI CASTG 2 cut(s) 555, 981
TseFI GTSAC 3 cut(s) 136, 724, 1052
TseI GCWGC 5 cut(s) 437, 653, 767, 824, 1032
Tsp45I GTSAC 3 cut(s) 136, 724, 1052
TspDTI ATGAA 2 cut(s) 85, 235
TspRI CASTG 2 cut(s) 555, 981
VpaK11BI GGWCC 3 cut(s) 90, 470, 911
XapI RAATTY 1 cut(s) 902
XhoI CTCGAG 1 cut(s) 68
XspI CTAG 4 cut(s) 360, 659, 764, 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.