Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Forward (+)

20853465 .. 20855472

Gene Structure 2008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G235700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGTGGAACCAAGCGTACCGGAAGACTGACGTGGAGGCCGGAGTAGGACCGAGTCCGCTCTACCCGATGATGCTTGAGAGCCCCGAGCTCCGGTGGTCCTTCATTCGCAAAATCTACTCGATCATAGCCATCCAATTGCTCGTCACCATCGCCGTCGCCGCCACCGTCGTTTCGTACCGTCCCGTCGCTCATTTCTTTGTCAGCACCAGTGCCGGCCTTGCCCTCTACATCGTCCTCATCATCTTGCCCTTCATCGTGCTGTGCCCGTTGTACTATTACCACCAGAAGCACCCGGTCAATTACCTTCTGCTTGGAGTTTTCACCATCTCTCTTGCCTTTATAGTCGGCTTGACTTGTGCGTTTACTAGCGGGAAGGTCATTTTGGAGTCTGTGATTCTGACGGCTGTGGTTGTGCTTGGTCTCACCTTATACACATTTTGGGCTGCAAAGAGAGGCCACGATTTCAACTTCCTGGGACCCTTTTTGTCTGGGGCTATACTGGTCCTAATTGTCTTTGCTTTGATTCAGGTTTTCTTCCCGCTTGGTAAGATCTCTGTGATGATATATGGGTGCTTGGCTTCGATCATATTTTGTGGCTACATTGTGTATGACACCGACAATCTGATTAAACGCTACTCTTATGACGAGTATATTTGGGCTGCGGTGTCCTTGTATCTGGATATCATCAACCTTTTCCTCGCTCTGCTCACTGTTTTCAGAGCTGCTGATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

245

Amino Acids

27.31

Weight (kDa)

8.27

Isoelectric Point (pI)

24.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	58
AciI	CCGC	5 cut(s)	56, 159, 369, 539, 662
AfaI	GTAC	3 cut(s)	17, 176, 272
AfiI	CCNNNNNNNGG	1 cut(s)	90
AgsI	TTSAA	1 cut(s)	466
AjiI	CACGTC	1 cut(s)	31
AjnI	CCWGG	1 cut(s)	471
AjuI	GAANNNNNNNTTGG	2 cut(s)	365, 397
AluBI	AGCT	2 cut(s)	88, 722
AluI	AGCT	2 cut(s)	88, 722
Alw21I	GWGCWC	1 cut(s)	90
Alw26I	GTCTC	1 cut(s)	425
Ama87I	CYCGRG	1 cut(s)	83
AoxI	GGCC	3 cut(s)	36, 214, 454
ApeKI	GCWGC	3 cut(s)	443, 659, 722
AspS9I	GGNCC	4 cut(s)	47, 96, 476, 502
AsuC2I	CCSGG	1 cut(s)	293
AsuHPI	GGTGA	3 cut(s)	136, 313, 415
AvaI	CYCGRG	1 cut(s)	83
AvaII	GGWCC	4 cut(s)	47, 96, 476, 502
BaeGI	GKGCMC	1 cut(s)	266
BanII	GRGCYC	2 cut(s)	83, 90
BbsI	GAAGAC	1 cut(s)	29
Bbv12I	GWGCWC	1 cut(s)	90
BbvI	GCAGC	3 cut(s)	430, 646, 709
BccI	CCATC	3 cut(s)	137, 155, 332
BceAI	ACGGC	2 cut(s)	137, 417
BciT130I	CCWGG	1 cut(s)	473
BcnI	CCSGG	1 cut(s)	293
BcoDI	GTCTC	1 cut(s)	425
BfaI	CTAG	1 cut(s)	366
BglII	AGATCT	1 cut(s)	549
BisI	GCNGC	4 cut(s)	159, 444, 660, 723
BlsI	GCNGC	4 cut(s)	160, 445, 661, 724
Bme1390I	CCNGG	2 cut(s)	293, 473
Bme18I	GGWCC	4 cut(s)	47, 96, 476, 502
BmeT110I	CYCGRG	1 cut(s)	83
BmgBI	CACGTC	1 cut(s)	31
BmgT120I	GGNCC	4 cut(s)	47, 96, 476, 502
BmiI	GGNNCC	3 cut(s)	8, 477, 478
BmrFI	CCNGG	2 cut(s)	293, 473
BmsI	GCATC	1 cut(s)	60
BpiI	GAAGAC	1 cut(s)	29
BpuEI	CTTGAG	1 cut(s)	95
BpuMI	CCSGG	1 cut(s)	293
BsaI	GGTCTC	1 cut(s)	425
BsaJI	CCNNGG	1 cut(s)	472
BsaWI	WCCGGW	2 cut(s)	18, 90
Bsc4I	CCNNNNNNNGG	1 cut(s)	90
Bse118I	RCCGGY	1 cut(s)	212
Bse1I	ACTGG	2 cut(s)	207, 504
BseBI	CCWGG	1 cut(s)	473
BseDI	CCNNGG	1 cut(s)	472
BseGI	GGATG	1 cut(s)	129
BseLI	CCNNNNNNNGG	1 cut(s)	90
BseNI	ACTGG	2 cut(s)	207, 504
BseSI	GKGCMC	1 cut(s)	266
BseXI	GCAGC	3 cut(s)	430, 646, 709
BshFI	GGCC	3 cut(s)	38, 216, 456
BsiHKAI	GWGCWC	1 cut(s)	90
BsiHKCI	CYCGRG	1 cut(s)	83
BsiSI	CCGG	5 cut(s)	19, 39, 91, 213, 293
BslFI	GGGAC	2 cut(s)	165, 489
BslI	CCNNNNNNNGG	1 cut(s)	90
BsmAI	GTCTC	1 cut(s)	425
BsmFI	GGGAC	2 cut(s)	165, 489
BsnI	GGCC	3 cut(s)	38, 216, 456
Bso31I	GGTCTC	1 cut(s)	425
BsoBI	CYCGRG	1 cut(s)	83
Bsp1286I	GDGCHC	3 cut(s)	83, 90, 266
Bsp143I	GATC	3 cut(s)	120, 549, 582
BspACI	CCGC	5 cut(s)	56, 159, 369, 539, 662
BspANI	GGCC	3 cut(s)	38, 216, 456
BspLI	GGNNCC	3 cut(s)	8, 477, 478
BspTNI	GGTCTC	1 cut(s)	425
BsrBI	CCGCTC	1 cut(s)	58
BsrFI	RCCGGY	1 cut(s)	212
BsrI	ACTGG	2 cut(s)	207, 504
BssAI	RCCGGY	1 cut(s)	212
BssECI	CCNNGG	1 cut(s)	472
BssMI	GATC	3 cut(s)	120, 549, 582
Bst2UI	CCWGG	1 cut(s)	473
Bst4CI	ACNGT	3 cut(s)	166, 179, 712
BstC8I	GCNNGC	1 cut(s)	214
BstF5I	GGATG	1 cut(s)	129
BstKTI	GATC	3 cut(s)	123, 552, 585
BstMAI	GTCTC	1 cut(s)	425
BstMBI	GATC	3 cut(s)	120, 549, 582
BstMWI	GCNNNNNNNGC	2 cut(s)	158, 218
BstNI	CCWGG	1 cut(s)	473
BstSCI	CCNGG	2 cut(s)	291, 471
BstSLI	GKGCMC	1 cut(s)	266
BstV1I	GCAGC	3 cut(s)	430, 646, 709
BstV2I	GAAGAC	1 cut(s)	29
BstX2I	RGATCY	1 cut(s)	549
BstYI	RGATCY	1 cut(s)	549
BsuRI	GGCC	3 cut(s)	38, 216, 456
BtgZI	GCGATG	1 cut(s)	133
BtrI	CACGTC	1 cut(s)	31
BtsCI	GGATG	1 cut(s)	129
BtsIMutI	CAGTG	2 cut(s)	214, 708
Cac8I	GCNNGC	1 cut(s)	214
Cfr10I	RCCGGY	1 cut(s)	212
Cfr13I	GGNCC	4 cut(s)	47, 96, 476, 502
Csp6I	GTAC	3 cut(s)	16, 175, 271
CviQI	GTAC	3 cut(s)	16, 175, 271
DpnI	GATC	3 cut(s)	122, 551, 584
DpnII	GATC	3 cut(s)	120, 549, 582
Ecl136II	GAGCTC	1 cut(s)	88
Eco24I	GRGCYC	2 cut(s)	83, 90
Eco31I	GGTCTC	1 cut(s)	425
Eco32I	GATATC	1 cut(s)	682
Eco47I	GGWCC	4 cut(s)	47, 96, 476, 502
Eco53kI	GAGCTC	1 cut(s)	88
Eco88I	CYCGRG	1 cut(s)	83
EcoICRI	GAGCTC	1 cut(s)	88
EcoO109I	RGGNCCY	1 cut(s)	476
EcoRII	CCWGG	1 cut(s)	471
EcoRV	GATATC	1 cut(s)	682
EcoT38I	GRGCYC	2 cut(s)	83, 90
FaqI	GGGAC	2 cut(s)	165, 489
FauI	CCCGC	2 cut(s)	362, 546
Fnu4HI	GCNGC	4 cut(s)	159, 444, 660, 723
FokI	GGATG	1 cut(s)	116
FriOI	GRGCYC	2 cut(s)	83, 90
Fsp4HI	GCNGC	4 cut(s)	159, 444, 660, 723
FspBI	CTAG	1 cut(s)	366
GluI	GCNGC	4 cut(s)	159, 444, 660, 723
HaeIII	GGCC	3 cut(s)	38, 216, 456
HapII	CCGG	5 cut(s)	19, 39, 91, 213, 293
HinfI	GANTC	4 cut(s)	52, 386, 394, 523
HpaII	CCGG	5 cut(s)	19, 39, 91, 213, 293
HphI	GGTGA	3 cut(s)	136, 313, 415
Hpy166II	GTNNAC	1 cut(s)	363
Hpy188I	TCNGA	3 cut(s)	399, 624, 719
Hpy188III	TCNNGA	1 cut(s)	677
Hpy8I	GTNNAC	1 cut(s)	363
Hpy99I	CGWCG	3 cut(s)	158, 170, 188
HpyAV	CCTTC	4 cut(s)	109, 259, 314, 367
HpyCH4III	ACNGT	3 cut(s)	166, 179, 712
HpyCH4IV	ACGT	1 cut(s)	30
HpyCH4V	TGCA	1 cut(s)	446
HpyF10VI	GCNNNNNNNGC	2 cut(s)	158, 218
HpySE526I	ACGT	1 cut(s)	30
KflI	GGGWCCC	1 cut(s)	476
KroI	GCCGGC	1 cut(s)	212
KroNI	GCCGGC	1 cut(s)	214
Kzo9I	GATC	3 cut(s)	120, 549, 582
LmnI	GCTCC	1 cut(s)	93
Lsp1109I	GCAGC	3 cut(s)	430, 646, 709
LweI	GCATC	1 cut(s)	60
MaeI	CTAG	1 cut(s)	366
MaeII	ACGT	1 cut(s)	30
MaeIII	GTNAC	1 cut(s)	142
MalI	GATC	3 cut(s)	122, 551, 584
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	3 cut(s)	120, 549, 582
MboII	GAAGA	2 cut(s)	34, 526
MfeI	CAATTG	1 cut(s)	134
MflI	RGATCY	1 cut(s)	549
MhlI	GDGCHC	3 cut(s)	83, 90, 266
MluCI	AATT	3 cut(s)	134, 298, 507
MlyI	GAGTC	2 cut(s)	61, 395
MnlI	CCTC	5 cut(s)	28, 233, 245, 446, 707
MroNI	GCCGGC	1 cut(s)	212
MseI	TTAA	1 cut(s)	627
MspI	CCGG	5 cut(s)	19, 39, 91, 213, 293
MspR9I	CCNGG	2 cut(s)	293, 473
MunI	CAATTG	1 cut(s)	134
MvaI	CCWGG	1 cut(s)	473
MwoI	GCNNNNNNNGC	2 cut(s)	158, 218
NaeI	GCCGGC	1 cut(s)	214
NciI	CCSGG	1 cut(s)	293
NdeII	GATC	3 cut(s)	120, 549, 582
NgoMIV	GCCGGC	1 cut(s)	212
NlaIV	GGNNCC	3 cut(s)	8, 477, 478
NmuCI	GTSAC	1 cut(s)	142
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PdiI	GCCGGC	1 cut(s)	214
PfeI	GAWTC	2 cut(s)	394, 523
PflFI	GACNNNGTC	1 cut(s)	51
PkrI	GCNGC	4 cut(s)	160, 445, 661, 724
PleI	GAGTC	2 cut(s)	60, 394
PpsI	GAGTC	2 cut(s)	60, 394
PpuMI	RGGWCCY	1 cut(s)	476
Psp124BI	GAGCTC	1 cut(s)	90
Psp5II	RGGWCCY	1 cut(s)	476
Psp6I	CCWGG	1 cut(s)	471
PspGI	CCWGG	1 cut(s)	471
PspN4I	GGNNCC	3 cut(s)	8, 477, 478
PspPI	GGNCC	4 cut(s)	47, 96, 476, 502
PspPPI	RGGWCCY	1 cut(s)	476
PsrI	GAACNNNNNNTAC	1 cut(s)	31
PsuI	RGATCY	1 cut(s)	549
PsyI	GACNNNGTC	1 cut(s)	51
RsaI	GTAC	3 cut(s)	17, 176, 272
RsaNI	GTAC	3 cut(s)	16, 175, 271
SacI	GAGCTC	1 cut(s)	90
SaqAI	TTAA	1 cut(s)	627
SatI	GCNGC	4 cut(s)	159, 444, 660, 723
Sau3AI	GATC	3 cut(s)	120, 549, 582
Sau96I	GGNCC	4 cut(s)	47, 96, 476, 502
SchI	GAGTC	2 cut(s)	61, 395
ScrFI	CCNGG	2 cut(s)	293, 473
SduI	GDGCHC	3 cut(s)	83, 90, 266
SetI	ASST	8 cut(s)	33, 90, 306, 378, 428, 531, 693, 724
SfaNI	GCATC	1 cut(s)	60
SinI	GGWCC	4 cut(s)	47, 96, 476, 502
SmlI	CTYRAG	1 cut(s)	74
SmoI	CTYRAG	1 cut(s)	74
Sse9I	AATT	3 cut(s)	134, 298, 507
SsiI	CCGC	5 cut(s)	56, 159, 369, 539, 662
SspMI	CTAG	1 cut(s)	366
SstI	GAGCTC	1 cut(s)	90
StyD4I	CCNGG	2 cut(s)	291, 471
TaaI	ACNGT	3 cut(s)	166, 179, 712
TaiI	ACGT	1 cut(s)	33
TaqI	TCGA	2 cut(s)	119, 581
TaqII	GACCGA	1 cut(s)	64
TasI	AATT	3 cut(s)	134, 298, 507
TatI	WGTACW	1 cut(s)	270
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	2 cut(s)	394, 523
Tru1I	TTAA	1 cut(s)	627
Tru9I	TTAA	1 cut(s)	627
TscAI	CASTG	2 cut(s)	214, 715
TseFI	GTSAC	1 cut(s)	142
TseI	GCWGC	3 cut(s)	443, 659, 722
Tsp45I	GTSAC	1 cut(s)	142
TspDTI	ATGAA	2 cut(s)	91, 241
TspRI	CASTG	2 cut(s)	214, 715
Tth111I	GACNNNGTC	1 cut(s)	51
VpaK11BI	GGWCC	4 cut(s)	47, 96, 476, 502
XspI	CTAG	1 cut(s)	366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.