AT1G04910

GDP-fucose protein O-fucosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
1387871 .. 1391381
3511 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04910.1

Sequence Viewer

Length: 1560 bp
ATGCGAAGGTTAGGTCACCACCGACTTCATGGGAAGACGGGAGGAGTTGGAACAAAGGGGATGGTGGCGAAACTGTCTATCGGAGTCATTGTTCTACTGATCTGTACGCTCTCGCTGCTTTTCTCGGCTAACATCGGTAGCAATCGCGAACCGACCCGTCCATCTAAGATAAACGTGGAAGAGCTCTGGGAGAGTGCTAAATCTGGTGGTTGGAGACCGTCTTCTGCACCACGATCTGACTGGCCTCCTCCTACGAAGGAGACAAATGGTTATCTCCGTGTTCGATGTAATGGTGGTTTGAATCAGCAACGTAGTGCGATATGTAATGCAGTACTTGCTGCGCGGATCATGAATGCTACACTTGTGTTGCCCGAATTAGATGCAAACTCGTTTTGGCATGATGACAGTGGTTTTCAAGGTATCTATGACGTTGAACATTTTATTGAGACACTGAAGTATGATGTTAAGATTGTGGGAAAGATCCCCGATGTTCACAAAAATGGGAAAACCAAGAAGATAAAAGCTTTTCAGATTCGTCCTCCTCGAGATGCTCCTATTGAGTGGTACCTGACAACTGCTCTAAAGGCAATGAGGGAACATAGTGCTATCTATCTTACCCCTTTTTCACATCGTTTAGCGGAGGAAATTGACAATCCTGAATATCAAAGGTTAAGGTGCAGAGTGAACTACCATGCTTTGAGATTCAAGCCACACATCATGAAGTTGAGTGAATCTATTGTTGATAAACTCCGGTCACAGGGCCACTTCATGTCGATCCATCTTCGTTTTGAAATGGATATGTTGGCATTTGCGGGGTGCTTTGACATATTTAACCCTGAGGAACAGAAGATACTTAGGAAGTACCGTAAAGAAAATTTTGCAGATAAAAGGCTTATTTACAACGAAAGACGGGCTATCGGGAAGTGTCCACTGACCCCTGAGGAGGTAGGTCTTATATTACGAGCAATGAGATTCGACAACTCAACAAGGATATACCTAGCAGCCGGTGAACTTTTTGGCGGGGAACAGTTCATGAAACCGTTTCGAACATTATTCCCACGGCTTGATAACCATAGCTCGGTAGACCCCTCTGAGGAGCTGTCAGCAACCTCACAGGGATTAATAGGATCAGCTGTGGATTACATGGTTTGTCTTCTCTCCGACATTTTTATGCCAACATATGATGGACCGAGCAATTTCGCCAACAATCTCTTAGGTCATCGCCTTTACTATGGTTTCCGTACCACAATCAGACCAGACAGAAAAGCATTAGCTCCAATTTTCATAGCTAGAGAGAAGGGGAAAAGGGCTGGCTTCGAAGAGGCAGTGAGACGAGTAATGCTGAAAACAAACTTCGGAGGGCCTCACAAGCGTGTATCTCCTGAATCGTTTTATACAAATTCATGGCCTGAATGTTTCTGTCAGATGAATCCGAAGAAGTCTAGTGATAAATGCCCGCCAAATAATGTTATAGAGATTCTTGACAGCCGGTTAGAGAGTATCAGAGATCCAGATTCAACTTCTCAGACGAATTCCACGGTCACTGGATTAGAACGGTAA

Protein Analysis

519

Amino Acids

59.04

Weight (kDa)

9.41

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 91 - 411 1.6e-92 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 564
AccB1I GGYRCC 1 cut(s) 564
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 2 cut(s) 147, 343
AciI CCGC 5 cut(s) 343, 638, 812, 1020, 1457
AclWI GGATC 5 cut(s) 353, 475, 769, 1135, 1502
AcsI RAATTY 3 cut(s) 874, 1399, 1531
AcuI CTGAAG 1 cut(s) 473
AfaI GTAC 5 cut(s) 106, 333, 566, 863, 1243
AfiI CCNNNNNNNGG 4 cut(s) 757, 943, 1078, 1093
AgsI TTSAA 6 cut(s) 301, 416, 434, 706, 791, 1518
AleI CACNNNNGTG 1 cut(s) 1371
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
AluBI AGCT 7 cut(s) 184, 524, 1077, 1099, 1133, 1274, 1289
AluI AGCT 7 cut(s) 184, 524, 1077, 1099, 1133, 1274, 1289
Alw21I GWGCWC 1 cut(s) 186
Alw26I GTCTC 4 cut(s) 208, 254, 440, 1324
AlwI GGATC 5 cut(s) 353, 475, 769, 1135, 1502
Ama87I CYCGRG 1 cut(s) 543
AoxI GGCC 4 cut(s) 242, 760, 1361, 1406
ApeKI GCWGC 3 cut(s) 115, 338, 1001
ApoI RAATTY 3 cut(s) 874, 1399, 1531
ArsI GACNNNNNNTTYG 1 cut(s) 30
AseI ATTAAT 1 cut(s) 1121
Asp718I GGTACC 1 cut(s) 564
AspLEI GCGC 1 cut(s) 343
AspS9I GGNCC 3 cut(s) 760, 1187, 1361
AsuHPI GGTGA 2 cut(s) 8, 1019
AsuII TTCGAA 2 cut(s) 1045, 1317
AvaI CYCGRG 1 cut(s) 543
AvaII GGWCC 1 cut(s) 1187
AxyI CCTNAGG 2 cut(s) 837, 939
BanI GGYRCC 1 cut(s) 564
BanII GRGCYC 1 cut(s) 186
BbsI GAAGAC 3 cut(s) 41, 213, 1145
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 3 cut(s) 102, 325, 1013
BccI CCATC 4 cut(s) 55, 169, 786, 1178
BceAI ACGGC 1 cut(s) 1076
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BcoDI GTCTC 4 cut(s) 208, 254, 440, 1324
BfaI CTAG 3 cut(s) 998, 1290, 1443
BisI GCNGC 3 cut(s) 116, 339, 1002
BlsI GCNGC 3 cut(s) 117, 340, 1003
BmcAI AGTACT 1 cut(s) 333
Bme18I GGWCC 1 cut(s) 1187
BmeT110I CYCGRG 1 cut(s) 543
BmgT120I GGNCC 3 cut(s) 760, 1187, 1361
BmiI GGNNCC 1 cut(s) 566
BmsI GCATC 2 cut(s) 370, 538
BpiI GAAGAC 3 cut(s) 41, 213, 1145
Bpu14I TTCGAA 2 cut(s) 1045, 1317
BsaI GGTCTC 1 cut(s) 208
BsaJI CCNNGG 2 cut(s) 1058, 1536
BsaWI WCCGGW 1 cut(s) 750
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 4 cut(s) 757, 943, 1078, 1093
Bse118I RCCGGY 2 cut(s) 1004, 1488
Bse1I ACTGG 2 cut(s) 245, 1549
Bse21I CCTNAGG 2 cut(s) 837, 939
Bse3DI GCAATG 2 cut(s) 594, 972
BseDI CCNNGG 2 cut(s) 1058, 1536
BseGI GGATG 1 cut(s) 66
BseLI CCNNNNNNNGG 4 cut(s) 757, 943, 1078, 1093
BseMI GCAATG 2 cut(s) 594, 972
BseMII CTCAG 4 cut(s) 828, 930, 1083, 1538
BseNI ACTGG 2 cut(s) 245, 1549
BseRI GAGGAG 5 cut(s) 57, 237, 531, 956, 1109
BseXI GCAGC 3 cut(s) 102, 325, 1013
BsgI GTGCAG 2 cut(s) 210, 697
Bsh1236I CGCG 2 cut(s) 147, 343
BshFI GGCC 4 cut(s) 244, 762, 1363, 1408
BshNI GGYRCC 1 cut(s) 564
BsiHKAI GWGCWC 1 cut(s) 186
BsiHKCI CYCGRG 1 cut(s) 543
BsiSI CCGG 3 cut(s) 751, 1005, 1489
BslI CCNNNNNNNGG 4 cut(s) 757, 943, 1078, 1093
BsmAI GTCTC 4 cut(s) 208, 254, 440, 1324
BsmBI CGTCTC 1 cut(s) 1324
BsmI GAATGC 1 cut(s) 358
BsnI GGCC 4 cut(s) 244, 762, 1363, 1408
Bso31I GGTCTC 1 cut(s) 208
BsoBI CYCGRG 1 cut(s) 543
Bsp119I TTCGAA 2 cut(s) 1045, 1317
Bsp1286I GDGCHC 1 cut(s) 186
Bsp143I GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
Bsp68I TCGCGA 1 cut(s) 147
BspACI CCGC 5 cut(s) 343, 638, 812, 1020, 1457
BspANI GGCC 4 cut(s) 244, 762, 1363, 1408
BspCNI CTCAG 4 cut(s) 829, 931, 1084, 1537
BspFNI CGCG 2 cut(s) 147, 343
BspHI TCATGA 3 cut(s) 348, 717, 1032
BspLI GGNNCC 1 cut(s) 566
BspPI GGATC 5 cut(s) 353, 475, 769, 1135, 1502
BspQI GCTCTTC 1 cut(s) 174
BspT104I TTCGAA 2 cut(s) 1045, 1317
BspT107I GGYRCC 1 cut(s) 564
BspTNI GGTCTC 1 cut(s) 208
BsrDI GCAATG 2 cut(s) 594, 972
BsrFI RCCGGY 2 cut(s) 1004, 1488
BsrI ACTGG 2 cut(s) 245, 1549
BssAI RCCGGY 2 cut(s) 1004, 1488
BssECI CCNNGG 2 cut(s) 1058, 1536
BssMI GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
Bst4CI ACNGT 8 cut(s) 75, 219, 407, 866, 1029, 1041, 1540, 1557
Bst6I CTCTTC 2 cut(s) 174, 1314
BstAPI GCANNNNNTGC 1 cut(s) 335
BstBI TTCGAA 2 cut(s) 1045, 1317
BstC8I GCNNGC 2 cut(s) 1312, 1457
BstDEI CTNAG 7 cut(s) 165, 837, 854, 939, 1092, 1213, 1524
BstDSI CCRYGG 2 cut(s) 1058, 1536
BstEII GGTNACC 1 cut(s) 14
BstF5I GGATG 1 cut(s) 66
BstFNI CGCG 2 cut(s) 147, 343
BstHHI GCGC 1 cut(s) 343
BstKTI GATC 7 cut(s) 102, 236, 348, 483, 777, 1130, 1510
BstMAI GTCTC 4 cut(s) 208, 254, 440, 1324
BstMBI GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
BstMWI GCNNNNNNNGC 4 cut(s) 115, 335, 584, 1369
BstPI GGTNACC 1 cut(s) 14
BstUI CGCG 2 cut(s) 147, 343
BstV1I GCAGC 3 cut(s) 102, 325, 1013
BstV2I GAAGAC 3 cut(s) 41, 213, 1145
BstX2I RGATCY 2 cut(s) 480, 1507
BstYI RGATCY 2 cut(s) 480, 1507
Bsu36I CCTNAGG 2 cut(s) 837, 939
BsuRI GGCC 4 cut(s) 244, 762, 1363, 1408
BtgI CCRYGG 2 cut(s) 1058, 1536
BtgZI GCGATG 1 cut(s) 1205
BtsCI GGATG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 1332
BtsIMutI CAGTG 5 cut(s) 412, 449, 929, 1332, 1542
BtuMI TCGCGA 1 cut(s) 147
Cac8I GCNNGC 2 cut(s) 1312, 1457
CciI TCATGA 3 cut(s) 348, 717, 1032
CfoI GCGC 1 cut(s) 343
Cfr10I RCCGGY 2 cut(s) 1004, 1488
Cfr13I GGNCC 3 cut(s) 760, 1187, 1361
Csp6I GTAC 5 cut(s) 105, 332, 565, 862, 1242
CviAII CATG 9 cut(s) 29, 349, 398, 692, 718, 769, 1033, 1144, 1404
CviQI GTAC 5 cut(s) 105, 332, 565, 862, 1242
DdeI CTNAG 7 cut(s) 165, 837, 854, 939, 1092, 1213, 1524
DpnI GATC 7 cut(s) 101, 235, 347, 482, 776, 1129, 1509
DpnII GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
Eam1104I CTCTTC 2 cut(s) 174, 1314
EarI CTCTTC 2 cut(s) 174, 1314
Ecl136II GAGCTC 1 cut(s) 184
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 1187
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 473
Eco81I CCTNAGG 2 cut(s) 837, 939
Eco88I CYCGRG 1 cut(s) 543
Eco91I GGTNACC 1 cut(s) 14
EcoICRI GAGCTC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 1361
EcoO65I GGTNACC 1 cut(s) 14
EcoRI GAATTC 1 cut(s) 1531
EcoT38I GRGCYC 1 cut(s) 186
Esp3I CGTCTC 1 cut(s) 1324
FaeI CATG 9 cut(s) 32, 352, 401, 695, 721, 772, 1036, 1147, 1407
FatI CATG 9 cut(s) 28, 348, 397, 691, 717, 768, 1032, 1143, 1403
FauI CCCGC 3 cut(s) 805, 1013, 1464
FauNDI CATATG 1 cut(s) 1180
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 3 cut(s) 116, 339, 1002
FokI GGATG 1 cut(s) 73
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 3 cut(s) 116, 339, 1002
FspBI CTAG 3 cut(s) 998, 1290, 1443
GlaI GCGC 1 cut(s) 342
GluI GCNGC 3 cut(s) 116, 339, 1002
HaeIII GGCC 4 cut(s) 244, 762, 1363, 1408
HapII CCGG 3 cut(s) 751, 1005, 1489
HhaI GCGC 1 cut(s) 343
Hin1II CATG 9 cut(s) 32, 352, 401, 695, 721, 772, 1036, 1147, 1407
Hin6I GCGC 1 cut(s) 341
HinP1I GCGC 1 cut(s) 341
HindIII AAGCTT 1 cut(s) 522
HpaII CCGG 3 cut(s) 751, 1005, 1489
HphI GGTGA 2 cut(s) 8, 1019
Hpy166II GTNNAC 5 cut(s) 493, 685, 929, 1010, 1084
Hpy8I GTNNAC 5 cut(s) 493, 685, 929, 1010, 1084
HpyAV CCTTC 2 cut(s) 250, 1291
HpyCH4III ACNGT 8 cut(s) 75, 219, 407, 866, 1029, 1041, 1540, 1557
HpyCH4IV ACGT 3 cut(s) 174, 310, 429
HpyCH4V TGCA 5 cut(s) 227, 329, 383, 678, 881
HpyF10VI GCNNNNNNNGC 4 cut(s) 115, 335, 584, 1369
HpyF3I CTNAG 7 cut(s) 165, 837, 854, 939, 1092, 1213, 1524
HpySE526I ACGT 3 cut(s) 174, 310, 429
Hsp92II CATG 9 cut(s) 32, 352, 401, 695, 721, 772, 1036, 1147, 1407
HspAI GCGC 1 cut(s) 341
KpnI GGTACC 1 cut(s) 568
Kzo9I GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 3 cut(s) 556, 1096, 1279
Lsp1109I GCAGC 3 cut(s) 102, 325, 1013
LweI GCATC 2 cut(s) 370, 538
MaeI CTAG 3 cut(s) 998, 1290, 1443
MaeII ACGT 3 cut(s) 174, 310, 429
MaeIII GTNAC 3 cut(s) 14, 753, 1540
MalI GATC 7 cut(s) 101, 235, 347, 482, 776, 1129, 1509
MboI GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
MboII GAAGA 9 cut(s) 46, 191, 213, 526, 773, 859, 1145, 1331, 1447
MflI RGATCY 2 cut(s) 480, 1507
MhlI GDGCHC 1 cut(s) 186
MluCI AATT 7 cut(s) 374, 645, 874, 1195, 1278, 1399, 1531
MlyI GAGTC 1 cut(s) 93
MmeI TCCRAC 3 cut(s) 28, 191, 1185
MseI TTAA 4 cut(s) 465, 671, 831, 1121
MslI CAYNNNNRTG 3 cut(s) 498, 1169, 1371
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 3 cut(s) 751, 1005, 1489
Mva1269I GAATGC 1 cut(s) 358
MvnI CGCG 2 cut(s) 147, 343
MwoI GCNNNNNNNGC 4 cut(s) 115, 335, 584, 1369
NdeI CATATG 1 cut(s) 1180
NdeII GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
NlaIII CATG 9 cut(s) 32, 352, 401, 695, 721, 772, 1036, 1147, 1407
NlaIV GGNNCC 1 cut(s) 566
NmeAIII GCCGAG 1 cut(s) 104
NmuCI GTSAC 3 cut(s) 14, 753, 1540
NruI TCGCGA 1 cut(s) 147
NspV TTCGAA 2 cut(s) 1045, 1317
OliI CACNNNNGTG 1 cut(s) 1371
PaeR7I CTCGAG 1 cut(s) 543
PagI TCATGA 3 cut(s) 348, 717, 1032
PciSI GCTCTTC 1 cut(s) 174
PcsI WCGNNNNNNNCGW 1 cut(s) 541
PctI GAATGC 1 cut(s) 358
PfeI GAWTC 9 cut(s) 301, 532, 702, 731, 972, 1385, 1429, 1477, 1514
PkrI GCNGC 3 cut(s) 117, 340, 1003
PleI GAGTC 1 cut(s) 92
PpsI GAGTC 1 cut(s) 92
PshBI ATTAAT 1 cut(s) 1121
Psp124BI GAGCTC 1 cut(s) 186
PspEI GGTNACC 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 566
PspPI GGNCC 3 cut(s) 760, 1187, 1361
PsrI GAACNNNNNNTAC 2 cut(s) 834, 866
PsuI RGATCY 2 cut(s) 480, 1507
PvuII CAGCTG 1 cut(s) 1133
RruI TCGCGA 1 cut(s) 147
RsaI GTAC 5 cut(s) 106, 333, 566, 863, 1243
RsaNI GTAC 5 cut(s) 105, 332, 565, 862, 1242
RseI CAYNNNNRTG 3 cut(s) 498, 1169, 1371
SacI GAGCTC 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 4 cut(s) 465, 671, 831, 1121
SatI GCNGC 3 cut(s) 116, 339, 1002
Sau3AI GATC 7 cut(s) 99, 233, 345, 480, 774, 1127, 1507
Sau96I GGNCC 3 cut(s) 760, 1187, 1361
ScaI AGTACT 1 cut(s) 333
SchI GAGTC 1 cut(s) 93
SduI GDGCHC 1 cut(s) 186
SfaNI GCATC 2 cut(s) 370, 538
Sfr274I CTCGAG 1 cut(s) 543
SfuI TTCGAA 2 cut(s) 1045, 1317
SinI GGWCC 1 cut(s) 1187
SlaI CTCGAG 1 cut(s) 543
SmiMI CAYNNNNRTG 3 cut(s) 498, 1169, 1371
SmlI CTYRAG 1 cut(s) 543
SmoI CTYRAG 1 cut(s) 543
Sse9I AATT 7 cut(s) 374, 645, 874, 1195, 1278, 1399, 1531
SsiI CCGC 5 cut(s) 343, 638, 812, 1020, 1457
SspMI CTAG 3 cut(s) 998, 1290, 1443
SstI GAGCTC 1 cut(s) 186
TaaI ACNGT 8 cut(s) 75, 219, 407, 866, 1029, 1041, 1540, 1557
TaiI ACGT 3 cut(s) 177, 313, 432
TaqI TCGA 6 cut(s) 283, 544, 773, 975, 1045, 1317
TaqII GACCGA 1 cut(s) 1204
TasI AATT 7 cut(s) 374, 645, 874, 1195, 1278, 1399, 1531
TatI WGTACW 1 cut(s) 331
TfiI GAWTC 9 cut(s) 301, 532, 702, 731, 972, 1385, 1429, 1477, 1514
Tru1I TTAA 4 cut(s) 465, 671, 831, 1121
Tru9I TTAA 4 cut(s) 465, 671, 831, 1121
TscAI CASTG 5 cut(s) 412, 456, 936, 1332, 1549
TseFI GTSAC 3 cut(s) 14, 753, 1540
TseI GCWGC 3 cut(s) 115, 338, 1001
Tsp45I GTSAC 3 cut(s) 14, 753, 1540
TspDTI ATGAA 9 cut(s) 17, 365, 734, 757, 1021, 1049, 1273, 1392, 1442
TspGWI ACGGA 2 cut(s) 266, 1229
TspRI CASTG 5 cut(s) 412, 456, 936, 1332, 1549
VpaK11BI GGWCC 1 cut(s) 1187
VspI ATTAAT 1 cut(s) 1121
XapI RAATTY 3 cut(s) 874, 1399, 1531
XcmI CCANNNNNNNNNTGG 2 cut(s) 26, 237
XhoI CTCGAG 1 cut(s) 543
XmiI GTMKAC 1 cut(s) 1083
XspI CTAG 3 cut(s) 998, 1290, 1443
ZrmI AGTACT 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.