Rh6CG249000

GDP-fucose protein O-fucosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
41892545 .. 41898438
5894 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG249000.1

Sequence Viewer

Length: 1200 bp
ATGAATGCTACCCTTGTGCTGCCGGAATTGGATGCAAACTCATTTTGGCATGATGACAGTGGTTTTCAGGGAATCTATGATGTTGAGCATTTCATCAAGTCATTAAGGTTTGATGTAAATATTGTAGAAAAGATGCCTGAAATTCGCAAAAATGGGAAGACCAAGAAGATAAAAGCTGTACAGCTCCGACCACCAAGAGATGCTCCTATCAGTTGGTATACTACAGATGCTCTTCAGAAAATGAAGGAGCATGGGGCTATCTATCTAACTCCCTTTTCACATCGTTTGGCGGAAGAAATTGACAACGCCGAGTACCAACGGCTGAGGTGCAGGGTTAACTACCAGGCTCTGATATTTAAGCCAAATATTATGAAGTTAAGTCAATCAATAGTTGATAAGCTCCGTACACAAGGTCACTTCATGTCTATACATCTTCGTTTTGAGATGGATATGCTGGCATTTGCTGGGTGCTTTGATATCTTTAACCCAAAAGAGCAAGAGATTTTGAAGAAGTATCGAAATGAAAATTTTGCACCAAAGAAGCTTGTTTACAAGGAAAGAAGAGCAATCGGAAAATGCCCATTAACTCCAGAAGAGGTCGGTCTTATTTTACGCGCAATGGAATTTAACAATTCTACCAGGATATACCAAGCTGCTGGTGAACTATTTGGTGGGGAGAGATTCATGAAACCATTCCGTGCTTTGTTCCCTCACCTTGAGAACCACAATTCTGTGGAGCACTCAGATGAGCTACCAGAGAACACCCAGGGATTAATAGGGTCTGCAGTGGATTACATGGTTTGTCTCCTCTCTGATATTTTTATGCCTACATATGATGGACCTAGCAACTTTGCCAACAATCTCCTTGGACACCGCCTCTATTATGGTTTCCGGACCACAATTAGACCTGATAGAAAAGCCCTTGCTCCAATCTTCATTGATCGCGAGAAAGGACGAAAATCAGGTTTTGAAGAAGCTGTTAGGCAAGTGATGCTAAAAACAAACCTTGGCGGCCCTCACAAGCGGATCTCACCTGAGTCTTTCTATACAATTTCTTGGCCAGAATGCTTCTGCCAAACATCTCCAAAGAATCCGGCAGATAAATGTCCACCAGATAATGTTTTGGAAATTCTGAACAGCCAGTTAAGTCAAGAGAACGATGATCCGGAATCAAATTTAACATCTGTTAGAGAGAGATGA

Protein Analysis

399

Amino Acids

46.07

Weight (kDa)

8.06

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 1 - 295 3.1e-76 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 218
AccII CGCG 2 cut(s) 615, 945
AccIII TCCGGA 2 cut(s) 891, 1165
AciI CCGC 4 cut(s) 290, 874, 1011, 1024
AclWI GGATC 2 cut(s) 1034, 1157
AcoI YGGCCR 1 cut(s) 1058
AcsI RAATTY 5 cut(s) 141, 526, 623, 1128, 1174
AcuI CTGAAG 1 cut(s) 218
AfaI GTAC 3 cut(s) 180, 314, 406
AgsI TTSAA 2 cut(s) 508, 971
AjnI CCWGG 3 cut(s) 342, 638, 765
AluBI AGCT 7 cut(s) 176, 184, 400, 544, 653, 751, 977
AluI AGCT 7 cut(s) 176, 184, 400, 544, 653, 751, 977
Alw21I GWGCWC 1 cut(s) 741
Alw26I GTCTC 1 cut(s) 809
AlwI GGATC 2 cut(s) 1034, 1157
AlwNI CAGNNNCTG 1 cut(s) 349
Aor13HI TCCGGA 2 cut(s) 891, 1165
AoxI GGCC 2 cut(s) 1012, 1058
ApeKI GCWGC 2 cut(s) 19, 653
ApoI RAATTY 5 cut(s) 141, 526, 623, 1128, 1174
AseI ATTAAT 1 cut(s) 773
Asp700I GAANNNNTTC 1 cut(s) 692
AspLEI GCGC 1 cut(s) 617
AspS9I GGNCC 3 cut(s) 839, 894, 1013
AsuHPI GGTGA 3 cut(s) 671, 704, 1023
AvaII GGWCC 2 cut(s) 839, 894
BalI TGGCCA 1 cut(s) 1060
BarI GAAGNNNNNNTAC 2 cut(s) 533, 565
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 741
BbvCI CCTCAGC 1 cut(s) 323
BbvI GCAGC 2 cut(s) 6, 640
BccI CCATC 2 cut(s) 439, 830
BceAI ACGGC 1 cut(s) 335
BciT130I CCWGG 3 cut(s) 344, 640, 767
BcoDI GTCTC 1 cut(s) 809
BfaI CTAG 1 cut(s) 843
BfmI CTRYAG 2 cut(s) 222, 783
BisI GCNGC 3 cut(s) 20, 654, 1012
BlsI GCNGC 3 cut(s) 21, 655, 1013
Bme1390I CCNGG 3 cut(s) 344, 640, 767
Bme18I GGWCC 2 cut(s) 839, 894
BmgT120I GGNCC 3 cut(s) 839, 894, 1013
BmrFI CCNGG 3 cut(s) 344, 640, 767
BmsI GCATC 5 cut(s) 22, 123, 190, 217, 981
BpiI GAAGAC 1 cut(s) 164
BpmI CTGGAG 1 cut(s) 573
Bpu10I CCTNAGC 1 cut(s) 323
BpuEI CTTGAG 1 cut(s) 737
BsaJI CCNNGG 4 cut(s) 765, 766, 865, 1006
BsaWI WCCGGW 2 cut(s) 891, 1165
Bse1I ACTGG 1 cut(s) 1141
Bse3DI GCAATG 1 cut(s) 624
BseAI TCCGGA 2 cut(s) 891, 1165
BseBI CCWGG 3 cut(s) 344, 640, 767
BseDI CCNNGG 4 cut(s) 765, 766, 865, 1006
BseGI GGATG 1 cut(s) 37
BseMI GCAATG 1 cut(s) 624
BseMII CTCAG 3 cut(s) 314, 756, 1026
BseNI ACTGG 1 cut(s) 1141
BseRI GAGGAG 1 cut(s) 797
BseXI GCAGC 2 cut(s) 6, 640
BseYI CCCAGC 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 349
Bsh1236I CGCG 2 cut(s) 615, 945
BshFI GGCC 2 cut(s) 1014, 1060
BsiHKAI GWGCWC 1 cut(s) 741
BsiSI CCGG 4 cut(s) 23, 892, 1094, 1166
BsmAI GTCTC 1 cut(s) 809
BsmI GAATGC 2 cut(s) 10, 1070
BsnI GGCC 2 cut(s) 1014, 1060
Bsp1286I GDGCHC 1 cut(s) 741
Bsp13I TCCGGA 2 cut(s) 891, 1165
Bsp1407I TGTACA 1 cut(s) 178
Bsp143I GATC 3 cut(s) 940, 1026, 1162
Bsp68I TCGCGA 1 cut(s) 945
BspACI CCGC 4 cut(s) 290, 874, 1011, 1024
BspANI GGCC 2 cut(s) 1014, 1060
BspCNI CTCAG 3 cut(s) 315, 755, 1027
BspEI TCCGGA 2 cut(s) 891, 1165
BspFNI CGCG 2 cut(s) 615, 945
BspHI TCATGA 1 cut(s) 684
BspMAI CTGCAG 1 cut(s) 787
BspPI GGATC 2 cut(s) 1034, 1157
BspQI GCTCTTC 2 cut(s) 237, 556
BsrDI GCAATG 1 cut(s) 624
BsrGI TGTACA 1 cut(s) 178
BsrI ACTGG 1 cut(s) 1141
BssECI CCNNGG 4 cut(s) 765, 766, 865, 1006
BssMI GATC 3 cut(s) 940, 1026, 1162
BssNAI GTATAC 1 cut(s) 219
BssT1I CCWWGG 2 cut(s) 865, 1006
Bst1107I GTATAC 1 cut(s) 219
Bst2UI CCWGG 3 cut(s) 344, 640, 767
Bst4CI ACNGT 1 cut(s) 59
Bst6I CTCTTC 3 cut(s) 237, 556, 588
BstAPI GCANNNNNTGC 1 cut(s) 991
BstAUI TGTACA 1 cut(s) 178
BstC8I GCNNGC 1 cut(s) 456
BstDEI CTNAG 3 cut(s) 323, 742, 1035
BstF5I GGATG 1 cut(s) 37
BstFNI CGCG 2 cut(s) 615, 945
BstHHI GCGC 1 cut(s) 617
BstKTI GATC 3 cut(s) 943, 1029, 1165
BstMAI GTCTC 1 cut(s) 809
BstMBI GATC 3 cut(s) 940, 1026, 1162
BstMWI GCNNNNNNNGC 1 cut(s) 991
BstNI CCWGG 3 cut(s) 344, 640, 767
BstSCI CCNGG 3 cut(s) 342, 638, 765
BstSFI CTRYAG 2 cut(s) 222, 783
BstUI CGCG 2 cut(s) 615, 945
BstV1I GCAGC 2 cut(s) 6, 640
BstV2I GAAGAC 1 cut(s) 164
BstX2I RGATCY 1 cut(s) 1026
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 1 cut(s) 1026
BstZ17I GTATAC 1 cut(s) 219
BsuRI GGCC 2 cut(s) 1014, 1060
BtsCI GGATG 1 cut(s) 37
BtsI GCAGTG 1 cut(s) 792
BtsIMutI CAGTG 2 cut(s) 64, 792
BtuMI TCGCGA 1 cut(s) 945
Cac8I GCNNGC 1 cut(s) 456
CaiI CAGNNNCTG 1 cut(s) 349
CciI TCATGA 1 cut(s) 684
CfoI GCGC 1 cut(s) 617
Cfr13I GGNCC 3 cut(s) 839, 894, 1013
Csp6I GTAC 3 cut(s) 179, 313, 405
CviAII CATG 5 cut(s) 50, 251, 421, 685, 796
CviQI GTAC 3 cut(s) 179, 313, 405
DdeI CTNAG 3 cut(s) 323, 742, 1035
DpnI GATC 3 cut(s) 942, 1028, 1164
DpnII GATC 3 cut(s) 940, 1026, 1162
EaeI YGGCCR 1 cut(s) 1058
Eam1104I CTCTTC 3 cut(s) 237, 556, 588
EarI CTCTTC 3 cut(s) 237, 556, 588
EciI GGCGGA 1 cut(s) 305
Eco130I CCWWGG 2 cut(s) 865, 1006
Eco32I GATATC 1 cut(s) 478
Eco47I GGWCC 2 cut(s) 839, 894
Eco57I CTGAAG 1 cut(s) 218
EcoRII CCWGG 3 cut(s) 342, 638, 765
EcoRV GATATC 1 cut(s) 478
EcoT14I CCWWGG 2 cut(s) 865, 1006
ErhI CCWWGG 2 cut(s) 865, 1006
FaeI CATG 5 cut(s) 53, 254, 424, 688, 799
FatI CATG 5 cut(s) 49, 250, 420, 684, 795
FauNDI CATATG 1 cut(s) 832
FblI GTMKAC 1 cut(s) 218
Fnu4HI GCNGC 3 cut(s) 20, 654, 1012
FokI GGATG 1 cut(s) 44
Fsp4HI GCNGC 3 cut(s) 20, 654, 1012
FspBI CTAG 1 cut(s) 843
GlaI GCGC 1 cut(s) 616
GluI GCNGC 3 cut(s) 20, 654, 1012
GsaI CCCAGC 1 cut(s) 468
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 2 cut(s) 1014, 1060
HapII CCGG 4 cut(s) 23, 892, 1094, 1166
HhaI GCGC 1 cut(s) 617
Hin1II CATG 5 cut(s) 53, 254, 424, 688, 799
Hin6I GCGC 1 cut(s) 615
HinP1I GCGC 1 cut(s) 615
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 1 cut(s) 542
HinfI GANTC 5 cut(s) 72, 681, 1037, 1090, 1169
HpaI GTTAAC 1 cut(s) 337
HpaII CCGG 4 cut(s) 23, 892, 1094, 1166
HphI GGTGA 3 cut(s) 671, 704, 1023
Hpy166II GTNNAC 6 cut(s) 219, 337, 407, 550, 662, 1109
Hpy188I TCNGA 7 cut(s) 188, 237, 351, 572, 745, 814, 1134
Hpy188III TCNNGA 6 cut(s) 590, 685, 892, 944, 1151, 1166
Hpy8I GTNNAC 6 cut(s) 219, 337, 407, 550, 662, 1109
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 1 cut(s) 59
HpyCH4V TGCA 4 cut(s) 35, 330, 533, 785
HpyF10VI GCNNNNNNNGC 1 cut(s) 991
HpyF3I CTNAG 3 cut(s) 323, 742, 1035
Hsp92II CATG 5 cut(s) 53, 254, 424, 688, 799
HspAI GCGC 1 cut(s) 615
Kpn2I TCCGGA 2 cut(s) 891, 1165
KspAI GTTAAC 1 cut(s) 337
Kzo9I GATC 3 cut(s) 940, 1026, 1162
LguI GCTCTTC 2 cut(s) 237, 556
LmnI GCTCC 6 cut(s) 189, 208, 247, 405, 736, 931
Lsp1109I GCAGC 2 cut(s) 6, 640
LweI GCATC 5 cut(s) 22, 123, 190, 217, 981
MaeI CTAG 1 cut(s) 843
MaeIII GTNAC 1 cut(s) 413
MalI GATC 3 cut(s) 942, 1028, 1164
MboI GATC 3 cut(s) 940, 1026, 1162
MflI RGATCY 1 cut(s) 1026
MhlI GDGCHC 1 cut(s) 741
MlsI TGGCCA 1 cut(s) 1060
MluNI TGGCCA 1 cut(s) 1060
MlyI GAGTC 1 cut(s) 1046
MmeI TCCRAC 1 cut(s) 211
MnlI CCTC 6 cut(s) 318, 589, 720, 818, 887, 1026
Mox20I TGGCCA 1 cut(s) 1060
MroI TCCGGA 2 cut(s) 891, 1165
MroXI GAANNNNTTC 1 cut(s) 692
MscI TGGCCA 1 cut(s) 1060
MslI CAYNNNNRTG 1 cut(s) 744
Msp20I TGGCCA 1 cut(s) 1060
MspI CCGG 4 cut(s) 23, 892, 1094, 1166
MspR9I CCNGG 3 cut(s) 344, 640, 767
Mva1269I GAATGC 2 cut(s) 10, 1070
MvaI CCWGG 3 cut(s) 344, 640, 767
MvnI CGCG 2 cut(s) 615, 945
MwoI GCNNNNNNNGC 1 cut(s) 991
NdeI CATATG 1 cut(s) 832
NdeII GATC 3 cut(s) 940, 1026, 1162
NlaIII CATG 5 cut(s) 53, 254, 424, 688, 799
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 1 cut(s) 413
NruI TCGCGA 1 cut(s) 945
PagI TCATGA 1 cut(s) 684
PasI CCCWGGG 1 cut(s) 766
PciSI GCTCTTC 2 cut(s) 237, 556
PctI GAATGC 2 cut(s) 10, 1070
PdmI GAANNNNTTC 1 cut(s) 692
PfeI GAWTC 4 cut(s) 72, 681, 1090, 1169
PkrI GCNGC 3 cut(s) 21, 655, 1013
PleI GAGTC 1 cut(s) 1045
PpsI GAGTC 1 cut(s) 1045
PshBI ATTAAT 1 cut(s) 773
Psp6I CCWGG 3 cut(s) 342, 638, 765
PspFI CCCAGC 1 cut(s) 464
PspGI CCWGG 3 cut(s) 342, 638, 765
PspPI GGNCC 3 cut(s) 839, 894, 1013
PstI CTGCAG 1 cut(s) 787
PstNI CAGNNNCTG 1 cut(s) 349
PsuI RGATCY 1 cut(s) 1026
RruI TCGCGA 1 cut(s) 945
RsaI GTAC 3 cut(s) 180, 314, 406
RsaNI GTAC 3 cut(s) 179, 313, 405
RseI CAYNNNNRTG 1 cut(s) 744
SapI GCTCTTC 2 cut(s) 237, 556
SatI GCNGC 3 cut(s) 20, 654, 1012
Sau3AI GATC 3 cut(s) 940, 1026, 1162
Sau96I GGNCC 3 cut(s) 839, 894, 1013
SchI GAGTC 1 cut(s) 1046
ScrFI CCNGG 3 cut(s) 344, 640, 767
SduI GDGCHC 1 cut(s) 741
SfaNI GCATC 5 cut(s) 22, 123, 190, 217, 981
SfcI CTRYAG 2 cut(s) 222, 783
SinI GGWCC 2 cut(s) 839, 894
SmiMI CAYNNNNRTG 1 cut(s) 744
SmlI CTYRAG 1 cut(s) 716
SmoI CTYRAG 1 cut(s) 716
SsiI CCGC 4 cut(s) 290, 874, 1011, 1024
SspI AATATT 2 cut(s) 121, 367
SspMI CTAG 1 cut(s) 843
StyD4I CCNGG 3 cut(s) 342, 638, 765
StyI CCWWGG 2 cut(s) 865, 1006
TaaI ACNGT 1 cut(s) 59
TaqI TCGA 1 cut(s) 517
TaqII GACCGA 1 cut(s) 590
TatI WGTACW 1 cut(s) 178
TauI GCSGC 1 cut(s) 1014
TfiI GAWTC 4 cut(s) 72, 681, 1090, 1169
TscAI CASTG 2 cut(s) 64, 792
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 2 cut(s) 19, 653
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 9 cut(s) 17, 82, 257, 386, 409, 537, 673, 701, 925
TspGWI ACGGA 2 cut(s) 392, 686
TspRI CASTG 2 cut(s) 64, 792
VpaK11BI GGWCC 2 cut(s) 839, 894
VspI ATTAAT 1 cut(s) 773
XapI RAATTY 5 cut(s) 141, 526, 623, 1128, 1174
XmiI GTMKAC 1 cut(s) 218
XmnI GAANNNNTTC 1 cut(s) 692
XspI CTAG 1 cut(s) 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.