Prupe.5G028000_v2.0.a1

GDP-fucose protein O-fucosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
3269840 .. 3276907
7068 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G028000.11

Sequence Viewer

Length: 1506 bp
ATGCGAAGACTGGGGCTTCATCAACGGCAGCATGCGAAGCCAGCCGGAGGTGGAGGAGGAGGGGTGAAGGGCATGATTGGGAGGCTATTGATCGCGGTTGTGGTTGTCTTGATCTGCACCATTTCTTTTATTGTTACATCGACGAGCAATGGCGGCGCTCGATCTGGCTCTCGCTCAAAGATGAGTTTAGATGAACTTTGGAGAAGTGCTGATTCTGTTGGTTGGAGACCATCATCAGCTCCACGGTCTGATTGGCCCCCTCCACCAAGCGAGACTAACGGCTACCTACGTGTGCGCTGTAATGGTGGTCTCAATCAACAACGCACTGCGATCTGTAATGCAGTTCTTGCAGCAAGAATCATGAATGCTACACTTGTCCTGCCTGAATTGGATGCAAACTCTTTTTGGCATGATGATAGTGGTTTCCGTGGTATCTATGATGTTGAGCATTTTATGAAGTCATTGAGGTATGATGTAAAAATTGTGGAAAAAATACCAGAAATTCGCAAAAATGGGAAGACCAAGAAGATAAAAGCTGTACAGCTTCGTCCCCCTAGAGATGCTCCTATCAGTTGGTATACTACAGACGCTCTTGTGAAAATGAAGGAGCATGGTGCTATTTATCTTACTCCATTTTCACATCGTTTGGCAGAAGAAATTGACAACCCTGAGTATCAACGGTTGAGGTGTAGAGTTAACTATCATGCTTTGAGGTTTAAGACAAATATTATGAAGTTAAGTCAATCAATAGTAGATAAGCTTCGCGCACAAGGTCACTTCATGTCCATACATCTTCGTTTTGAGATGGATATGCTGGCATTTGCTGGGTGCTTTGATATTTTCAACTCCAAAGAGCAGGAGATTTTGAAGAAGTATCGAAAAGAAAATTTTGCACCAAAGAAGCTTGTCTACAAGGAAAGAAGAGCCATTGGAAAATGCCCATTAACTCCAGAAGAGGTCGGTCTTATTTTACGTGCAATGGGGTTTAACAATTCTACCAGGATATACTTAGCTGCTGGTGACCTATTTGGTGGGGAGAGATTCATGAAACCTTTTCGGGCTTTGTTCCCTCACCTTGAGAACCACAGTTCTGTAGATCCCTCAGACGAGCTAGCAGAAAACACCCAGGGGTTGTCAGGGTCTGCAGTGGACTACATGGTTTGTCTCCTCTCTGATATTTTTATGCCTACATATGATGGCCCTAGCAACTTTGCAAACAATCTCCTTGGTCACCGCCTTTATTATGGCTTCCGAACCACAATTAGACCTGACAGGAAAGCACTTGCCCCAATCTTCATTGATCGAGAGAAGGGACGGACAGCAGGTTTTGAAGAAGCTGTTAGGCAAGCCATGTTCAAGACCAACCTTGGCGGGCCCCACAAGCGGATCCCACCTGAGTCTTTCTATACAAATTCTTGGCCAGAATGTTTCTGCCAAACATCTCCACAGAATCCGGCACATAAATGTCCACCAGATAATGTGTTGGAAATTCTTGACAGCAGTTGA

Protein Analysis

502

Amino Acids

56.51

Weight (kDa)

9.48

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1313
AccI GTMKAC 2 cut(s) 578, 909
AccII CGCG 2 cut(s) 95, 765
AciI CCGC 5 cut(s) 95, 153, 1234, 1371, 1384
AclWI GGATC 3 cut(s) 1091, 1381, 1394
AcoI YGGCCR 1 cut(s) 1418
AcsI RAATTY 4 cut(s) 501, 886, 1411, 1488
AfaI GTAC 1 cut(s) 540
AfiI CCNNNNNNNGG 2 cut(s) 47, 1383
AflIII ACRYGT 1 cut(s) 289
AgsI TTSAA 4 cut(s) 844, 868, 1331, 1357
AjnI CCWGG 2 cut(s) 998, 1125
AluBI AGCT 8 cut(s) 239, 536, 544, 760, 904, 1013, 1111, 1337
AluI AGCT 8 cut(s) 239, 536, 544, 760, 904, 1013, 1111, 1337
Alw26I GTCTC 4 cut(s) 220, 266, 314, 1169
AlwI GGATC 3 cut(s) 1091, 1381, 1394
AlwNI CAGNNNCTG 1 cut(s) 1142
AoxI GGCC 4 cut(s) 254, 1198, 1373, 1418
ApaI GGGCCC 1 cut(s) 1377
ApeKI GCWGC 3 cut(s) 28, 350, 1013
ApoI RAATTY 4 cut(s) 501, 886, 1411, 1488
AspLEI GCGC 3 cut(s) 158, 297, 767
AspS9I GGNCC 4 cut(s) 255, 1199, 1373, 1374
AsuHPI GGTGA 4 cut(s) 76, 1031, 1064, 1223
AsuNHI GCTAGC 1 cut(s) 1111
BaeGI GKGCMC 1 cut(s) 1377
BalI TGGCCA 1 cut(s) 1420
BamHI GGATCC 1 cut(s) 1386
BanII GRGCYC 1 cut(s) 1377
BarI GAAGNNNNNNTAC 4 cut(s) 744, 776, 893, 925
BbsI GAAGAC 2 cut(s) 13, 524
BbvI GCAGC 3 cut(s) 40, 362, 1000
BccI CCATC 3 cut(s) 238, 799, 1190
BceAI ACGGC 2 cut(s) 41, 295
BciT130I CCWGG 2 cut(s) 1000, 1127
BcoDI GTCTC 4 cut(s) 220, 266, 314, 1169
BfaI CTAG 3 cut(s) 555, 1112, 1203
BfmI CTRYAG 3 cut(s) 582, 1092, 1143
BfoI RGCGCY 1 cut(s) 159
BfuAI ACCTGC 1 cut(s) 1313
BisI GCNGC 4 cut(s) 29, 154, 351, 1014
BlsI GCNGC 4 cut(s) 30, 155, 352, 1015
Bme1390I CCNGG 2 cut(s) 1000, 1127
BmgT120I GGNCC 4 cut(s) 255, 1199, 1373, 1374
BmiI GGNNCC 4 cut(s) 257, 1375, 1376, 1388
BmrFI CCNGG 2 cut(s) 1000, 1127
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 2 cut(s) 382, 550
BmtI GCTAGC 1 cut(s) 1115
BmuI ACTGGG 1 cut(s) 20
BpiI GAAGAC 2 cut(s) 13, 524
BpmI CTGGAG 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1097
BsaAI YACGTR 2 cut(s) 290, 974
BsaI GGTCTC 2 cut(s) 220, 314
BsaJI CCNNGG 6 cut(s) 242, 427, 1125, 1126, 1225, 1366
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 2 cut(s) 47, 1383
Bse1I ACTGG 1 cut(s) 15
Bse3DI GCAATG 2 cut(s) 154, 984
BseBI CCWGG 2 cut(s) 1000, 1127
BseDI CCNNGG 6 cut(s) 242, 427, 1125, 1126, 1225, 1366
BseGI GGATG 1 cut(s) 397
BseLI CCNNNNNNNGG 2 cut(s) 47, 1383
BseMI GCAATG 2 cut(s) 154, 984
BseMII CTCAG 3 cut(s) 660, 1116, 1386
BseNI ACTGG 1 cut(s) 15
BseRI GAGGAG 3 cut(s) 69, 72, 1157
BseSI GKGCMC 1 cut(s) 1377
BseXI GCAGC 3 cut(s) 40, 362, 1000
BseYI CCCAGC 1 cut(s) 824
BsgI GTGCAG 1 cut(s) 100
Bsh1236I CGCG 2 cut(s) 95, 765
BshFI GGCC 4 cut(s) 256, 1200, 1375, 1420
BsiSI CCGG 2 cut(s) 45, 1454
BslFI GGGAC 2 cut(s) 534, 1326
BslI CCNNNNNNNGG 2 cut(s) 47, 1383
BsmAI GTCTC 4 cut(s) 220, 266, 314, 1169
BsmFI GGGAC 2 cut(s) 534, 1326
BsmI GAATGC 1 cut(s) 370
BsnI GGCC 4 cut(s) 256, 1200, 1375, 1420
Bso31I GGTCTC 2 cut(s) 220, 314
Bsp120I GGGCCC 1 cut(s) 1373
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp1407I TGTACA 1 cut(s) 538
Bsp143I GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
BspACI CCGC 5 cut(s) 95, 153, 1234, 1371, 1384
BspANI GGCC 4 cut(s) 256, 1200, 1375, 1420
BspCNI CTCAG 3 cut(s) 661, 1115, 1387
BspFNI CGCG 2 cut(s) 95, 765
BspHI TCATGA 2 cut(s) 360, 1044
BspLI GGNNCC 4 cut(s) 257, 1375, 1376, 1388
BspMAI CTGCAG 1 cut(s) 1147
BspMI ACCTGC 1 cut(s) 1313
BspOI GCTAGC 1 cut(s) 1115
BspPI GGATC 3 cut(s) 1091, 1381, 1394
BspQI GCTCTTC 1 cut(s) 916
BspTNI GGTCTC 2 cut(s) 220, 314
BsrDI GCAATG 2 cut(s) 154, 984
BsrGI TGTACA 1 cut(s) 538
BsrI ACTGG 1 cut(s) 15
BssECI CCNNGG 6 cut(s) 242, 427, 1125, 1126, 1225, 1366
BssMI GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
BssNAI GTATAC 1 cut(s) 579
BssT1I CCWWGG 2 cut(s) 1225, 1366
Bst1107I GTATAC 1 cut(s) 579
Bst2UI CCWGG 2 cut(s) 1000, 1127
Bst4CI ACNGT 3 cut(s) 246, 681, 1088
Bst6I CTCTTC 2 cut(s) 916, 948
BstAPI GCANNNNNTGC 1 cut(s) 347
BstAUI TGTACA 1 cut(s) 538
BstBAI YACGTR 2 cut(s) 290, 974
BstC8I GCNNGC 6 cut(s) 33, 42, 816, 1113, 1347, 1373
BstDEI CTNAG 4 cut(s) 669, 1009, 1102, 1395
BstDSI CCRYGG 2 cut(s) 242, 427
BstEII GGTNACC 2 cut(s) 1019, 1229
BstF5I GGATG 1 cut(s) 397
BstFNI CGCG 2 cut(s) 95, 765
BstH2I RGCGCY 1 cut(s) 159
BstHHI GCGC 3 cut(s) 158, 297, 767
BstKTI GATC 7 cut(s) 93, 114, 164, 333, 1099, 1303, 1389
BstMAI GTCTC 4 cut(s) 220, 266, 314, 1169
BstMBI GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
BstMWI GCNNNNNNNGC 5 cut(s) 37, 41, 153, 347, 1381
BstNI CCWGG 2 cut(s) 1000, 1127
BstNSI RCATGY 1 cut(s) 35
BstPI GGTNACC 2 cut(s) 1019, 1229
BstSCI CCNGG 2 cut(s) 998, 1125
BstSFI CTRYAG 3 cut(s) 582, 1092, 1143
BstSLI GKGCMC 1 cut(s) 1377
BstUI CGCG 2 cut(s) 95, 765
BstV1I GCAGC 3 cut(s) 40, 362, 1000
BstV2I GAAGAC 2 cut(s) 13, 524
BstX2I RGATCY 2 cut(s) 1096, 1386
BstYI RGATCY 2 cut(s) 1096, 1386
BstZ17I GTATAC 1 cut(s) 579
BsuRI GGCC 4 cut(s) 256, 1200, 1375, 1420
BtgI CCRYGG 2 cut(s) 242, 427
BtsCI GGATG 1 cut(s) 397
BtsI GCAGTG 2 cut(s) 324, 1152
BtsIMutI CAGTG 2 cut(s) 324, 1152
BveI ACCTGC 1 cut(s) 1313
Cac8I GCNNGC 6 cut(s) 33, 42, 816, 1113, 1347, 1373
CaiI CAGNNNCTG 1 cut(s) 1142
CciI TCATGA 2 cut(s) 360, 1044
CfoI GCGC 3 cut(s) 158, 297, 767
Cfr13I GGNCC 4 cut(s) 255, 1199, 1373, 1374
CseI GACGC 1 cut(s) 596
Csp6I GTAC 1 cut(s) 539
CviQI GTAC 1 cut(s) 539
DdeI CTNAG 4 cut(s) 669, 1009, 1102, 1395
DpnI GATC 7 cut(s) 92, 113, 163, 332, 1098, 1302, 1388
DpnII GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
EaeI YGGCCR 1 cut(s) 1418
Eam1104I CTCTTC 2 cut(s) 916, 948
EarI CTCTTC 2 cut(s) 916, 948
Eco130I CCWWGG 2 cut(s) 1225, 1366
Eco24I GRGCYC 1 cut(s) 1377
Eco31I GGTCTC 2 cut(s) 220, 314
Eco91I GGTNACC 2 cut(s) 1019, 1229
EcoO109I RGGNCCY 1 cut(s) 1374
EcoO65I GGTNACC 2 cut(s) 1019, 1229
EcoRII CCWGG 2 cut(s) 998, 1125
EcoT14I CCWWGG 2 cut(s) 1225, 1366
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 2 cut(s) 1225, 1366
FaqI GGGAC 2 cut(s) 534, 1326
FauI CCCGC 1 cut(s) 1364
FauNDI CATATG 1 cut(s) 1192
FblI GTMKAC 2 cut(s) 578, 909
Fnu4HI GCNGC 4 cut(s) 29, 154, 351, 1014
FokI GGATG 1 cut(s) 404
FriOI GRGCYC 1 cut(s) 1377
Fsp4HI GCNGC 4 cut(s) 29, 154, 351, 1014
FspBI CTAG 3 cut(s) 555, 1112, 1203
GlaI GCGC 3 cut(s) 157, 296, 766
GluI GCNGC 4 cut(s) 29, 154, 351, 1014
GsaI CCCAGC 1 cut(s) 828
GsuI CTGGAG 1 cut(s) 933
HaeII RGCGCY 1 cut(s) 159
HaeIII GGCC 4 cut(s) 256, 1200, 1375, 1420
HapII CCGG 2 cut(s) 45, 1454
HgaI GACGC 1 cut(s) 596
HhaI GCGC 3 cut(s) 158, 297, 767
Hin6I GCGC 3 cut(s) 156, 295, 765
HinP1I GCGC 3 cut(s) 156, 295, 765
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HindIII AAGCTT 2 cut(s) 758, 902
HinfI GANTC 5 cut(s) 212, 357, 1041, 1397, 1450
HpaI GTTAAC 1 cut(s) 697
HpaII CCGG 2 cut(s) 45, 1454
HphI GGTGA 4 cut(s) 76, 1031, 1064, 1223
Hpy166II GTNNAC 5 cut(s) 579, 697, 910, 1150, 1469
Hpy188I TCNGA 4 cut(s) 250, 1105, 1174, 1253
Hpy188III TCNNGA 7 cut(s) 109, 361, 950, 1045, 1304, 1357, 1493
Hpy8I GTNNAC 5 cut(s) 579, 697, 910, 1150, 1469
Hpy99I CGWCG 1 cut(s) 145
HpyAV CCTTC 3 cut(s) 61, 598, 1303
HpyCH4III ACNGT 3 cut(s) 246, 681, 1088
HpyCH4IV ACGT 2 cut(s) 289, 973
HpyCH4V TGCA 8 cut(s) 117, 341, 350, 395, 893, 977, 1145, 1214
HpyF10VI GCNNNNNNNGC 5 cut(s) 37, 41, 153, 347, 1381
HpyF3I CTNAG 4 cut(s) 669, 1009, 1102, 1395
HpySE526I ACGT 2 cut(s) 289, 973
HspAI GCGC 3 cut(s) 156, 295, 765
KspAI GTTAAC 1 cut(s) 697
Kzo9I GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
LguI GCTCTTC 1 cut(s) 916
LmnI GCTCC 3 cut(s) 244, 568, 607
Lsp1109I GCAGC 3 cut(s) 40, 362, 1000
LweI GCATC 2 cut(s) 382, 550
MaeI CTAG 3 cut(s) 555, 1112, 1203
MaeII ACGT 2 cut(s) 289, 973
MaeIII GTNAC 4 cut(s) 133, 773, 1019, 1229
MalI GATC 7 cut(s) 92, 113, 163, 332, 1098, 1302, 1388
MboI GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
MflI RGATCY 2 cut(s) 1096, 1386
MhlI GDGCHC 1 cut(s) 1377
MlsI TGGCCA 1 cut(s) 1420
MluCI AATT 9 cut(s) 386, 480, 501, 657, 886, 991, 1260, 1411, 1488
MluNI TGGCCA 1 cut(s) 1420
MlyI GAGTC 1 cut(s) 1406
MmeI TCCRAC 2 cut(s) 203, 1464
Mox20I TGGCCA 1 cut(s) 1420
MscI TGGCCA 1 cut(s) 1420
MseI TTAA 5 cut(s) 696, 717, 737, 944, 987
MslI CAYNNNNRTG 1 cut(s) 1462
Msp20I TGGCCA 1 cut(s) 1420
MspI CCGG 2 cut(s) 45, 1454
MspR9I CCNGG 2 cut(s) 1000, 1127
Mva1269I GAATGC 1 cut(s) 370
MvaI CCWGG 2 cut(s) 1000, 1127
MvnI CGCG 2 cut(s) 95, 765
MwoI GCNNNNNNNGC 5 cut(s) 37, 41, 153, 347, 1381
NdeI CATATG 1 cut(s) 1192
NdeII GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
NheI GCTAGC 1 cut(s) 1111
NlaIV GGNNCC 4 cut(s) 257, 1375, 1376, 1388
NmuCI GTSAC 3 cut(s) 773, 1019, 1229
NspI RCATGY 1 cut(s) 35
PaeI GCATGC 1 cut(s) 35
PagI TCATGA 2 cut(s) 360, 1044
PasI CCCWGGG 1 cut(s) 1126
PciSI GCTCTTC 1 cut(s) 916
PctI GAATGC 1 cut(s) 370
PfeI GAWTC 4 cut(s) 212, 357, 1041, 1450
PkrI GCNGC 4 cut(s) 30, 155, 352, 1015
PleI GAGTC 1 cut(s) 1405
PpsI GAGTC 1 cut(s) 1405
Ppu21I YACGTR 2 cut(s) 290, 974
Psp6I CCWGG 2 cut(s) 998, 1125
PspEI GGTNACC 2 cut(s) 1019, 1229
PspFI CCCAGC 1 cut(s) 824
PspGI CCWGG 2 cut(s) 998, 1125
PspN4I GGNNCC 4 cut(s) 257, 1375, 1376, 1388
PspOMI GGGCCC 1 cut(s) 1373
PspPI GGNCC 4 cut(s) 255, 1199, 1373, 1374
PstI CTGCAG 1 cut(s) 1147
PstNI CAGNNNCTG 1 cut(s) 1142
PsuI RGATCY 2 cut(s) 1096, 1386
RsaI GTAC 1 cut(s) 540
RsaNI GTAC 1 cut(s) 539
RseI CAYNNNNRTG 1 cut(s) 1462
SapI GCTCTTC 1 cut(s) 916
SaqAI TTAA 5 cut(s) 696, 717, 737, 944, 987
SatI GCNGC 4 cut(s) 29, 154, 351, 1014
Sau3AI GATC 7 cut(s) 90, 111, 161, 330, 1096, 1300, 1386
Sau96I GGNCC 4 cut(s) 255, 1199, 1373, 1374
SchI GAGTC 1 cut(s) 1406
ScrFI CCNGG 2 cut(s) 1000, 1127
SduI GDGCHC 1 cut(s) 1377
SfaNI GCATC 2 cut(s) 382, 550
SfcI CTRYAG 3 cut(s) 582, 1092, 1143
SmiMI CAYNNNNRTG 1 cut(s) 1462
SmlI CTYRAG 1 cut(s) 1076
SmoI CTYRAG 1 cut(s) 1076
SphI GCATGC 1 cut(s) 35
Sse9I AATT 9 cut(s) 386, 480, 501, 657, 886, 991, 1260, 1411, 1488
SsiI CCGC 5 cut(s) 95, 153, 1234, 1371, 1384
SspI AATATT 1 cut(s) 727
SspMI CTAG 3 cut(s) 555, 1112, 1203
StyD4I CCNGG 2 cut(s) 998, 1125
StyI CCWWGG 2 cut(s) 1225, 1366
TaaI ACNGT 3 cut(s) 246, 681, 1088
TaiI ACGT 2 cut(s) 292, 976
TaqI TCGA 4 cut(s) 140, 160, 877, 1303
TaqII GACCGA 1 cut(s) 950
TasI AATT 9 cut(s) 386, 480, 501, 657, 886, 991, 1260, 1411, 1488
TatI WGTACW 1 cut(s) 538
TauI GCSGC 1 cut(s) 156
TfiI GAWTC 4 cut(s) 212, 357, 1041, 1450
Tru1I TTAA 5 cut(s) 696, 717, 737, 944, 987
Tru9I TTAA 5 cut(s) 696, 717, 737, 944, 987
TscAI CASTG 2 cut(s) 331, 1152
TseFI GTSAC 3 cut(s) 773, 1019, 1229
TseI GCWGC 3 cut(s) 28, 350, 1013
Tsp45I GTSAC 3 cut(s) 773, 1019, 1229
TspGWI ACGGA 2 cut(s) 416, 1330
TspRI CASTG 2 cut(s) 331, 1152
XapI RAATTY 4 cut(s) 501, 886, 1411, 1488
XceI RCATGY 1 cut(s) 35
XcmI CCANNNNNNNNNTGG 1 cut(s) 249
XmiI GTMKAC 2 cut(s) 578, 909
XspI CTAG 3 cut(s) 555, 1112, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.