AT1G11080

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
3694328 .. 3698013
3686 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11080.1

Sequence Viewer

Length: 1479 bp
ATGGATAATTATCAGACCAAGAATATATCTAATCTATTAACTTCTTTGTGTTTTACCACTCTCTTAATATTAGCTCCGGTGGTTATATGCACTAGACAACACCGGTTCGATAGCCCGAAAAGAAGCTTGTTGGCCAACGAGCAAGATTTAGTGACAGGTTTGCCTGGACAGCCTGATGTGAGTTTCAGACATTATGCCGGATATGTCCCTGTCGATGAATCCAACGGAAGAGCTATGTTTTACTGGTTCTTTGAGGCCATGGATCTCCCGAAAGAGAAACCTCTAGTCCTCTGGCTTAATGGAGGTCCAGGTTGTTCTTCTGTGGGATATGGGGCAACACAAGAAATTGGTCCTTTTCTCGTGGACACCAACGGAAACGGACTTAACTTTAATCCATACGCATGGAATAAAGAGGCCAACATGCTGTTTTTAGAATCTCCCGTCGGTGTTGGCTTTTCGTATTCAAACACAAGTAGCGATTATCAAAAACTTGGAGATGACTTTACAGCAAGAGACGCATACACTTTTCTTTGCAACTGGTTCGAGAAATTCCCAGAGCACAAAGAAAATACGTTCTATATCGCGGGTGAAAGTTATGCAGGAAAATACGTACCTGAGCTAGCAGAGGTTGTATACGATAACAATAACAATAACAAGAAGAATGGTTCATCGTTTCACATCAATCTTAAGGGTATTTTGTTGGGGAATCCTGAGACATCAGATGCAGAAGATTGGAGAGGTTGGGTGGATTATGCATGGAGCCATGCAGTAATATCAGATGAGACTCATAGGATCATAACCAGGACGTGCAATTTCAGCAGCGATAATACTTGGAGCAACGATGAGTGCAATGAGGCCGTAGCAGAAGTTCTCAAGCAGTATCACGAGATAGATATCTATAGCATCTATACCTCAGTTTGCATAGGAGATTCTGCGCGATCGTCTTACTTTGATTCAGCGCAATTCAAAACAAATTCTCGCATTAGCTCCAAGAGGATGCCACCGAGGCTCATGGGTGGATATGATCCATGCTTAGATGATTACGCGAGAGTATTTTACAACAGAGCAGATGTTCAGAAGTCTCTTCATGCGAGTGATGGAGTTAATCTCAAGAACTGGAGCATTTGCAACATGGAGATCTTTAATAATTGGACTGGTTCAAACCCGTCGGTTTTGCCTATTTACGAGAAACTCATCGCCGGAGGATTAAGAATATGGGTTTACAGTGGTGACACAGACGGAAGAGTTCCAGTACTTGCGACTCGTTATAGCTTAAACGCACTCGAATTACCCATCAAGACAGCTTGGAGGCCATGGTACCATGAAAAACAGGTAAGTGGGTGGCTTCAAGAATACGAAGGTTTAACGTTTGCTACGTTCAGAGGAGCTGGACATGCGGTGCCTTGCTTCAAACCAAGCAGCTCTCTCGCCTTTTTCTCGGCGTTTCTCAGCGGAGTTCCTCCTCCGCCATCGCGGTAG

Protein Analysis

492

Amino Acids

55.44

Weight (kDa)

5.38

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 55 - 485 9.5e-146 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1317
AccB1I GGYRCC 2 cut(s) 1317, 1399
AccI GTMKAC 1 cut(s) 633
AccII CGCG 4 cut(s) 584, 937, 1046, 1474
AciI CCGC 5 cut(s) 584, 1397, 1452, 1466, 1474
AclI AACGTT 1 cut(s) 1367
AclWI GGATC 3 cut(s) 270, 800, 1019
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 2 cut(s) 548, 973
AfaI GTAC 3 cut(s) 612, 1254, 1319
AflII CTTAAG 1 cut(s) 686
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 5 cut(s) 465, 967, 1161, 1349, 1411
AjiI CACGTC 1 cut(s) 807
AjnI CCWGG 3 cut(s) 163, 307, 800
AluBI AGCT 9 cut(s) 74, 126, 233, 619, 987, 1272, 1304, 1388, 1422
AluI AGCT 9 cut(s) 74, 126, 233, 619, 987, 1272, 1304, 1388, 1422
Alw21I GWGCWC 1 cut(s) 561
Alw26I GTCTC 4 cut(s) 507, 707, 776, 1086
AlwI GGATC 3 cut(s) 270, 800, 1019
AoxI GGCC 5 cut(s) 132, 255, 414, 855, 1310
ApeKI GCWGC 2 cut(s) 819, 1419
ApoI RAATTY 2 cut(s) 548, 973
AsiGI ACCGGT 1 cut(s) 102
Asp718I GGTACC 1 cut(s) 1317
AspLEI GCGC 2 cut(s) 937, 961
AspS9I GGNCC 2 cut(s) 305, 350
AsuHPI GGTGA 2 cut(s) 599, 1241
AsuNHI GCTAGC 1 cut(s) 619
AvaII GGWCC 2 cut(s) 305, 350
BalI TGGCCA 1 cut(s) 134
BanI GGYRCC 2 cut(s) 1317, 1399
BauI CACGAG 2 cut(s) 359, 884
Bbv12I GWGCWC 1 cut(s) 561
BbvI GCAGC 2 cut(s) 831, 1431
BccI CCATC 3 cut(s) 1091, 1301, 1477
BceAI ACGGC 1 cut(s) 842
BcgI CGANNNNNNTGC 4 cut(s) 523, 557, 1408, 1442
BciT130I CCWGG 3 cut(s) 165, 309, 802
BcoDI GTCTC 4 cut(s) 507, 707, 776, 1086
BfaI CTAG 3 cut(s) 93, 284, 620
BfmI CTRYAG 1 cut(s) 898
BfrI CTTAAG 1 cut(s) 686
BglI GCCNNNNNGGC 1 cut(s) 1006
BglII AGATCT 1 cut(s) 1137
BisI GCNGC 2 cut(s) 820, 1420
BlsI GCNGC 2 cut(s) 821, 1421
BmcAI AGTACT 1 cut(s) 1254
Bme1390I CCNGG 3 cut(s) 165, 309, 802
Bme18I GGWCC 2 cut(s) 305, 350
BmgBI CACGTC 1 cut(s) 807
BmgT120I GGNCC 2 cut(s) 305, 350
BmiI GGNNCC 3 cut(s) 761, 1319, 1401
BmrFI CCNGG 3 cut(s) 165, 309, 802
BmsI GCATC 3 cut(s) 712, 912, 987
BmtI GCTAGC 1 cut(s) 623
BplI GAGNNNNNCTC 2 cut(s) 1092, 1124
BpmI CTGGAG 1 cut(s) 1138
Bpu10I CCTNAGC 1 cut(s) 615
BpuEI CTTGAG 2 cut(s) 857, 1094
BsaAI YACGTR 1 cut(s) 610
BsaBI GATNNNNATC 2 cut(s) 9, 893
BsaJI CCNNGG 3 cut(s) 258, 1004, 1313
BsaWI WCCGGW 2 cut(s) 76, 102
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 5 cut(s) 248, 542, 1121, 1159, 1250
Bse3DI GCAATG 1 cut(s) 856
Bse8I GATNNNNATC 2 cut(s) 9, 893
BseBI CCWGG 3 cut(s) 165, 309, 802
BseDI CCNNGG 3 cut(s) 258, 1004, 1313
BseGI GGATG 1 cut(s) 1002
BseJI GATNNNNATC 2 cut(s) 9, 893
BseMI GCAATG 1 cut(s) 856
BseMII CTCAG 4 cut(s) 606, 702, 927, 1462
BseNI ACTGG 5 cut(s) 248, 542, 1121, 1159, 1250
BseRI GAGGAG 2 cut(s) 1398, 1452
BseXI GCAGC 2 cut(s) 831, 1431
Bsh1236I CGCG 4 cut(s) 584, 937, 1046, 1474
Bsh1285I CGRYCG 1 cut(s) 941
BshFI GGCC 5 cut(s) 134, 257, 416, 857, 1312
BshNI GGYRCC 2 cut(s) 1317, 1399
BshTI ACCGGT 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 941
BsiHKAI GWGCWC 1 cut(s) 561
BsiSI CCGG 4 cut(s) 77, 103, 198, 1200
BslFI GGGAC 1 cut(s) 191
BsmAI GTCTC 4 cut(s) 507, 707, 776, 1086
BsmBI CGTCTC 1 cut(s) 507
BsmFI GGGAC 1 cut(s) 191
BsnI GGCC 5 cut(s) 134, 257, 416, 857, 1312
Bsp1286I GDGCHC 1 cut(s) 561
Bsp143I GATC 5 cut(s) 262, 792, 938, 1024, 1137
Bsp19I CCATGG 2 cut(s) 258, 1313
BspACI CCGC 5 cut(s) 584, 1397, 1452, 1466, 1474
BspANI GGCC 5 cut(s) 134, 257, 416, 857, 1312
BspCNI CTCAG 4 cut(s) 607, 703, 926, 1461
BspFNI CGCG 4 cut(s) 584, 937, 1046, 1474
BspLI GGNNCC 3 cut(s) 761, 1319, 1401
BspOI GCTAGC 1 cut(s) 623
BspPI GGATC 3 cut(s) 270, 800, 1019
BspQI GCTCTTC 1 cut(s) 223
BspT107I GGYRCC 2 cut(s) 1317, 1399
BspTI CTTAAG 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 856
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 5 cut(s) 248, 542, 1121, 1159, 1250
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 3 cut(s) 258, 1004, 1313
BssMI GATC 5 cut(s) 262, 792, 938, 1024, 1137
BssNAI GTATAC 1 cut(s) 634
BssSI CACGAG 2 cut(s) 359, 884
BssT1I CCWWGG 2 cut(s) 258, 1313
Bst1107I GTATAC 1 cut(s) 634
Bst2BI CACGAG 2 cut(s) 359, 884
Bst2UI CCWGG 3 cut(s) 165, 309, 802
Bst4CI ACNGT 1 cut(s) 1226
Bst6I CTCTTC 3 cut(s) 223, 1089, 1237
BstAFI CTTAAG 1 cut(s) 686
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 1 cut(s) 621
BstDEI CTNAG 5 cut(s) 615, 711, 913, 1033, 1448
BstDSI CCRYGG 2 cut(s) 258, 1313
BstF5I GGATG 1 cut(s) 1002
BstFNI CGCG 4 cut(s) 584, 937, 1046, 1474
BstHHI GCGC 2 cut(s) 937, 961
BstKTI GATC 5 cut(s) 265, 795, 941, 1027, 1140
BstMAI GTCTC 4 cut(s) 507, 707, 776, 1086
BstMBI GATC 5 cut(s) 262, 792, 938, 1024, 1137
BstMCI CGRYCG 1 cut(s) 941
BstMWI GCNNNNNNNGC 5 cut(s) 169, 515, 816, 1006, 1394
BstNI CCWGG 3 cut(s) 165, 309, 802
BstNSI RCATGY 2 cut(s) 424, 1397
BstSCI CCNGG 3 cut(s) 163, 307, 800
BstSFI CTRYAG 1 cut(s) 898
BstSNI TACGTA 1 cut(s) 610
BstUI CGCG 4 cut(s) 584, 937, 1046, 1474
BstV1I GCAGC 2 cut(s) 831, 1431
BstX2I RGATCY 2 cut(s) 262, 1137
BstXI CCANNNNNNTGG 1 cut(s) 402
BstYI RGATCY 2 cut(s) 262, 1137
BstZ17I GTATAC 1 cut(s) 634
BsuRI GGCC 5 cut(s) 134, 257, 416, 857, 1312
BtgI CCRYGG 2 cut(s) 258, 1313
BtgZI GCGATG 2 cut(s) 1180, 1455
BtrI CACGTC 1 cut(s) 807
BtsCI GGATG 1 cut(s) 1002
BtsIMutI CAGTG 1 cut(s) 1231
Cac8I GCNNGC 1 cut(s) 621
CfoI GCGC 2 cut(s) 937, 961
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 2 cut(s) 305, 350
CseI GACGC 1 cut(s) 524
Csp6I GTAC 3 cut(s) 611, 1253, 1318
CspAI ACCGGT 1 cut(s) 102
CviQI GTAC 3 cut(s) 611, 1253, 1318
DdeI CTNAG 5 cut(s) 615, 711, 913, 1033, 1448
DpnI GATC 5 cut(s) 264, 794, 940, 1026, 1139
DpnII GATC 5 cut(s) 262, 792, 938, 1024, 1137
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 3 cut(s) 223, 1089, 1237
EarI CTCTTC 3 cut(s) 223, 1089, 1237
EciI GGCGGA 1 cut(s) 1455
Eco105I TACGTA 1 cut(s) 610
Eco130I CCWWGG 2 cut(s) 258, 1313
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 2 cut(s) 305, 350
EcoRII CCWGG 3 cut(s) 163, 307, 800
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 2 cut(s) 258, 1313
EcoT22I ATGCAT 1 cut(s) 757
ErhI CCWWGG 2 cut(s) 258, 1313
Esp3I CGTCTC 1 cut(s) 507
FaqI GGGAC 1 cut(s) 191
FauI CCCGC 1 cut(s) 577
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 2 cut(s) 820, 1420
FokI GGATG 1 cut(s) 1009
Fsp4HI GCNGC 2 cut(s) 820, 1420
FspBI CTAG 3 cut(s) 93, 284, 620
GlaI GCGC 2 cut(s) 936, 960
GluI GCNGC 2 cut(s) 820, 1420
GsuI CTGGAG 1 cut(s) 1138
HaeIII GGCC 5 cut(s) 134, 257, 416, 857, 1312
HapII CCGG 4 cut(s) 77, 103, 198, 1200
HgaI GACGC 1 cut(s) 524
HhaI GCGC 2 cut(s) 937, 961
Hin6I GCGC 2 cut(s) 935, 959
HinP1I GCGC 2 cut(s) 935, 959
HindIII AAGCTT 1 cut(s) 124
HinfI GANTC 7 cut(s) 218, 434, 706, 784, 929, 953, 1261
HpaII CCGG 4 cut(s) 77, 103, 198, 1200
HphI GGTGA 2 cut(s) 599, 1241
Hpy166II GTNNAC 3 cut(s) 364, 634, 1222
Hpy188I TCNGA 6 cut(s) 15, 188, 721, 778, 1077, 1382
Hpy188III TCNNGA 7 cut(s) 268, 544, 710, 884, 1111, 1297, 1349
Hpy8I GTNNAC 3 cut(s) 364, 634, 1222
Hpy99I CGWCG 2 cut(s) 446, 1171
HpyAV CCTTC 1 cut(s) 1352
HpyCH4III ACNGT 1 cut(s) 1226
HpyCH4IV ACGT 5 cut(s) 572, 609, 806, 1367, 1376
HpyF10VI GCNNNNNNNGC 5 cut(s) 169, 515, 816, 1006, 1394
HpyF3I CTNAG 5 cut(s) 615, 711, 913, 1033, 1448
HpySE526I ACGT 5 cut(s) 572, 609, 806, 1367, 1376
HspAI GCGC 2 cut(s) 935, 959
KpnI GGTACC 1 cut(s) 1321
Kzo9I GATC 5 cut(s) 262, 792, 938, 1024, 1137
LguI GCTCTTC 1 cut(s) 223
LmnI GCTCC 6 cut(s) 79, 759, 834, 992, 1119, 1385
Lsp1109I GCAGC 2 cut(s) 831, 1431
LweI GCATC 3 cut(s) 712, 912, 987
MaeI CTAG 3 cut(s) 93, 284, 620
MaeII ACGT 5 cut(s) 572, 609, 806, 1367, 1376
MaeIII GTNAC 2 cut(s) 151, 1229
MalI GATC 5 cut(s) 264, 794, 940, 1026, 1139
MboI GATC 5 cut(s) 262, 792, 938, 1024, 1137
MboII GAAGA 6 cut(s) 240, 309, 670, 740, 1076, 1254
MflI RGATCY 2 cut(s) 262, 1137
MhlI GDGCHC 1 cut(s) 561
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 8 cut(s) 7, 345, 548, 811, 962, 973, 1147, 1286
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 2 cut(s) 778, 1255
MmeI TCCRAC 1 cut(s) 246
Mox20I TGGCCA 1 cut(s) 134
Mph1103I ATGCAT 1 cut(s) 757
MscI TGGCCA 1 cut(s) 134
MslI CAYNNNNRTG 2 cut(s) 400, 1092
Msp20I TGGCCA 1 cut(s) 134
MspA1I CMGCKG 1 cut(s) 1452
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 4 cut(s) 77, 103, 198, 1200
MspR9I CCNGG 3 cut(s) 165, 309, 802
MvaI CCWGG 3 cut(s) 165, 309, 802
MvnI CGCG 4 cut(s) 584, 937, 1046, 1474
MwoI GCNNNNNNNGC 5 cut(s) 169, 515, 816, 1006, 1394
NcoI CCATGG 2 cut(s) 258, 1313
NdeII GATC 5 cut(s) 262, 792, 938, 1024, 1137
NheI GCTAGC 1 cut(s) 619
NlaIV GGNNCC 3 cut(s) 761, 1319, 1401
NmeAIII GCCGAG 1 cut(s) 1418
NmuCI GTSAC 2 cut(s) 151, 1229
NsiI ATGCAT 1 cut(s) 757
NspI RCATGY 2 cut(s) 424, 1397
PciSI GCTCTTC 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 1373
PfeI GAWTC 5 cut(s) 218, 434, 706, 929, 953
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 2 cut(s) 821, 1421
Ple19I CGATCG 1 cut(s) 941
PleI GAGTC 2 cut(s) 778, 1255
PpsI GAGTC 2 cut(s) 778, 1255
Ppu21I YACGTR 1 cut(s) 610
Psp1406I AACGTT 1 cut(s) 1367
Psp6I CCWGG 3 cut(s) 163, 307, 800
PspGI CCWGG 3 cut(s) 163, 307, 800
PspN4I GGNNCC 3 cut(s) 761, 1319, 1401
PspPI GGNCC 2 cut(s) 305, 350
PsrI GAACNNNNNNTAC 2 cut(s) 852, 884
PsuI RGATCY 2 cut(s) 262, 1137
PvuI CGATCG 1 cut(s) 941
RsaI GTAC 3 cut(s) 612, 1254, 1319
RsaNI GTAC 3 cut(s) 611, 1253, 1318
RseI CAYNNNNRTG 2 cut(s) 400, 1092
SapI GCTCTTC 1 cut(s) 223
SatI GCNGC 2 cut(s) 820, 1420
Sau3AI GATC 5 cut(s) 262, 792, 938, 1024, 1137
Sau96I GGNCC 2 cut(s) 305, 350
ScaI AGTACT 1 cut(s) 1254
SchI GAGTC 2 cut(s) 778, 1255
ScrFI CCNGG 3 cut(s) 165, 309, 802
SduI GDGCHC 1 cut(s) 561
SfaNI GCATC 3 cut(s) 712, 912, 987
SfcI CTRYAG 1 cut(s) 898
SinI GGWCC 2 cut(s) 305, 350
SmiMI CAYNNNNRTG 2 cut(s) 400, 1092
SmlI CTYRAG 3 cut(s) 686, 872, 1109
SmoI CTYRAG 3 cut(s) 686, 872, 1109
SnaBI TACGTA 1 cut(s) 610
Sse9I AATT 8 cut(s) 7, 345, 548, 811, 962, 973, 1147, 1286
SsiI CCGC 5 cut(s) 584, 1397, 1452, 1466, 1474
SspI AATATT 1 cut(s) 69
SspMI CTAG 3 cut(s) 93, 284, 620
StyD4I CCNGG 3 cut(s) 163, 307, 800
StyI CCWWGG 2 cut(s) 258, 1313
TaaI ACNGT 1 cut(s) 1226
TaiI ACGT 5 cut(s) 575, 612, 809, 1370, 1379
TaqI TCGA 4 cut(s) 108, 213, 543, 1284
TasI AATT 8 cut(s) 7, 345, 548, 811, 962, 973, 1147, 1286
TatI WGTACW 1 cut(s) 1252
TfiI GAWTC 5 cut(s) 218, 434, 706, 929, 953
TscAI CASTG 1 cut(s) 1231
TseFI GTSAC 2 cut(s) 151, 1229
TseI GCWGC 2 cut(s) 819, 1419
Tsp45I GTSAC 2 cut(s) 151, 1229
TspDTI ATGAA 4 cut(s) 231, 657, 1076, 1338
TspGWI ACGGA 4 cut(s) 240, 387, 393, 1254
TspRI CASTG 1 cut(s) 1231
Vha464I CTTAAG 1 cut(s) 686
VpaK11BI GGWCC 2 cut(s) 305, 350
XapI RAATTY 2 cut(s) 548, 973
XceI RCATGY 2 cut(s) 424, 1397
XmiI GTMKAC 1 cut(s) 633
XspI CTAG 3 cut(s) 93, 284, 620
ZrmI AGTACT 1 cut(s) 1254
Zsp2I ATGCAT 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.