AT1G21890

WAT1-related protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
7682584 .. 7685662
3079 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G21890.1

Sequence Viewer

Length: 1170 bp
ATGGGGAGAGGGTTAATGAATAGTTTGAAACCATACTTAGCAATGATATCTATGCAGTTTGGTTATGCCGGTATGTACATAATCACCATGGTCTCTCTTAAGCATGGCATGAACCATTACGTCCTAGCCGTTTATCGCCATGCAATTGCCACTGCCGTCATCGCTCCATTTGCTCTTTTCCATGAAAGGAAAATAAGGCCCAAGATGACGTTCCGAATATTCCTCCAAATTGCGCTGCTCGGTTTTATTGAGCCGGTGCTTGATCAGAACCTCTACTACGTCGGGATGACTTACACGTCAGCAACTTTCGCTTCTGCTACTGCTAATGTCCTTCCGGCCATCACCTTCGTCTTGGCCATTATTTTCAGGTTAGAAAGCGTGAACTTTAAGAAGGTACGAAGCATAGCCAAAGTTGTAGGAACGGTGATCACAGTCTCCGGAGCACTTCTCATGACTCTCTACAAGGGTCCAATAGTTGACTTTATCCGATTCGGCGGTGGAGGAGGAGGAGGTAGTGATGGTGCAGGAGGATCCCACGGTGGTGCAGGAGCGGCAGCGATGGACAAACACTGGATTCCGGGAACACTTATGCTGTTGGGAAGAACTTTTGGTTGGGCCGGTTTCTTCATCCTACAATCGTTTACACTGAAGCAGTACCCAGCTGAGCTGTCATTAACGACGTTAATATGTTTAATGGGAACGTTAGAAGGAACCGCTGTTTCATTGGTAACGGTACGTGACTTGAGTGCTTGGAAAATCGGCTTCGACTCTAATCTCTTCGCCGCTGCTTACTCCGGGGTGATTTGTTCGGGAGTGGCGTATTACGTGCAAGGAGTAGTAATGAGAGAAAGAGGACCAGTTTTTGTTGCGACATTTAATCCACTTTGTGTCGTTATAACTGCTGCTCTTGGTGTTGTTGTCTTGTCTGAAAGCATTCATCTCGGAAGTGTGATTGGAACGCTATTTATAATCGTGGGCCTATACACTGTTGTATGGGGTAAAGGCAAAGACAAAAGAATGACGGATGATGACGAAGATTGCAAAGGACTTCCGATTAAAAGTCCGGTTAAACCGGTAGATACCGGTAAAGGCTTAGCCGCAGAACTGGAGATGAAATCAAAGGAAGGTCAAGAGGCAAAGGCTACTACTACTACTCAAGTTGAGATTTGA

Protein Analysis

389

Amino Acids

41.71

Weight (kDa)

9.26

Isoelectric Point (pI)

23.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 12 - 151 6.5e-13 EamA-like transporter family
EamA PF00892 194 - 331 1.3e-09 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 896, 968
AasI GACNNNNNNGTC 1 cut(s) 295
AccBSI CCGCTC 1 cut(s) 551
AccIII TCCGGA 1 cut(s) 437
AciI CCGC 5 cut(s) 495, 551, 714, 783, 1098
AclI AACGTT 1 cut(s) 701
AclWI GGATC 2 cut(s) 525, 538
AcoI YGGCCR 2 cut(s) 336, 354
AcuI CTGAAG 1 cut(s) 668
AdeI CACNNNGTG 1 cut(s) 887
AfaI GTAC 4 cut(s) 77, 396, 656, 735
AflII CTTAAG 1 cut(s) 98
AflIII ACRYGT 1 cut(s) 294
AgeI ACCGGT 2 cut(s) 1072, 1082
AgsI TTSAA 1 cut(s) 28
AjiI CACGTC 1 cut(s) 297
AjuI GAANNNNNNNTTGG 4 cut(s) 194, 226, 595, 627
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 2 cut(s) 662, 667
AluI AGCT 2 cut(s) 662, 667
Alw21I GWGCWC 1 cut(s) 445
Alw26I GTCTC 2 cut(s) 97, 439
AlwI GGATC 2 cut(s) 525, 538
Aor13HI TCCGGA 1 cut(s) 437
AoxI GGCC 5 cut(s) 197, 336, 354, 615, 976
ApeKI GCWGC 4 cut(s) 235, 554, 785, 902
AsiGI ACCGGT 2 cut(s) 1072, 1082
Asp700I GAANNNNTTC 1 cut(s) 933
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 5 cut(s) 198, 467, 615, 854, 976
AsuC2I CCSGG 2 cut(s) 579, 796
AsuHPI GGTGA 4 cut(s) 76, 334, 436, 811
AvaII GGWCC 2 cut(s) 467, 854
BalI TGGCCA 1 cut(s) 356
BamHI GGATCC 1 cut(s) 530
Bbv12I GWGCWC 1 cut(s) 445
BbvI GCAGC 4 cut(s) 222, 566, 772, 889
BccI CCATC 3 cut(s) 347, 512, 553
BceAI ACGGC 2 cut(s) 113, 140
BcgI CGANNNNNNTGC 2 cut(s) 922, 956
BclI TGATCA 2 cut(s) 262, 426
BcnI CCSGG 2 cut(s) 579, 796
BcoDI GTCTC 2 cut(s) 97, 439
BfaI CTAG 1 cut(s) 125
BfrI CTTAAG 1 cut(s) 98
BisI GCNGC 7 cut(s) 236, 552, 555, 783, 786, 903, 1098
BlpI GCTNAGC 2 cut(s) 663, 1093
BlsI GCNGC 7 cut(s) 237, 553, 556, 784, 787, 904, 1099
Bme1390I CCNGG 2 cut(s) 579, 796
Bme18I GGWCC 2 cut(s) 467, 854
BmgBI CACGTC 1 cut(s) 297
BmgT120I GGNCC 5 cut(s) 198, 467, 615, 854, 976
BmiI GGNNCC 3 cut(s) 468, 532, 712
BmrFI CCNGG 2 cut(s) 579, 796
BplI GAGNNNNNCTC 2 cut(s) 432, 464
BpmI CTGGAG 1 cut(s) 1127
Bpu1102I GCTNAGC 2 cut(s) 663, 1093
BpuEI CTTGAG 2 cut(s) 763, 1140
BpuMI CCSGG 2 cut(s) 579, 796
BsaAI YACGTR 2 cut(s) 737, 826
BsaI GGTCTC 1 cut(s) 97
BsaJI CCNNGG 3 cut(s) 87, 535, 795
BsaWI WCCGGW 4 cut(s) 437, 1063, 1072, 1082
Bse118I RCCGGY 5 cut(s) 68, 253, 617, 1072, 1082
Bse1I ACTGG 3 cut(s) 575, 857, 1110
Bse3DI GCAATG 1 cut(s) 48
BseAI TCCGGA 1 cut(s) 437
BseDI CCNNGG 3 cut(s) 87, 535, 795
BseGI GGATG 3 cut(s) 291, 627, 1030
BseMI GCAATG 1 cut(s) 48
BseMII CTCAG 1 cut(s) 654
BseNI ACTGG 3 cut(s) 575, 857, 1110
BseRI GAGGAG 3 cut(s) 516, 519, 522
BseXI GCAGC 4 cut(s) 222, 566, 772, 889
BseYI CCCAGC 1 cut(s) 658
BsgI GTGCAG 2 cut(s) 543, 564
BshFI GGCC 5 cut(s) 199, 338, 356, 617, 978
BshTI ACCGGT 2 cut(s) 1072, 1082
BsiHKAI GWGCWC 1 cut(s) 445
BsmAI GTCTC 2 cut(s) 97, 439
BsmI GAATGC 1 cut(s) 933
BsnI GGCC 5 cut(s) 199, 338, 356, 617, 978
Bso31I GGTCTC 1 cut(s) 97
Bsp1286I GDGCHC 1 cut(s) 445
Bsp13I TCCGGA 1 cut(s) 437
Bsp1407I TGTACA 1 cut(s) 75
Bsp143I GATC 3 cut(s) 262, 426, 530
Bsp1720I GCTNAGC 2 cut(s) 663, 1093
Bsp19I CCATGG 1 cut(s) 87
BspACI CCGC 5 cut(s) 495, 551, 714, 783, 1098
BspANI GGCC 5 cut(s) 199, 338, 356, 617, 978
BspCNI CTCAG 1 cut(s) 655
BspEI TCCGGA 1 cut(s) 437
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 3 cut(s) 468, 532, 712
BspPI GGATC 2 cut(s) 525, 538
BspTI CTTAAG 1 cut(s) 98
BspTNI GGTCTC 1 cut(s) 97
BsrBI CCGCTC 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 48
BsrFI RCCGGY 5 cut(s) 68, 253, 617, 1072, 1082
BsrGI TGTACA 1 cut(s) 75
BsrI ACTGG 3 cut(s) 575, 857, 1110
BssAI RCCGGY 5 cut(s) 68, 253, 617, 1072, 1082
BssECI CCNNGG 3 cut(s) 87, 535, 795
BssMI GATC 3 cut(s) 262, 426, 530
BssT1I CCWWGG 1 cut(s) 87
Bst4CI ACNGT 5 cut(s) 424, 433, 539, 733, 988
Bst6I CTCTTC 1 cut(s) 782
BstAFI CTTAAG 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 75
BstBAI YACGTR 2 cut(s) 737, 826
BstDEI CTNAG 3 cut(s) 37, 663, 1093
BstDSI CCRYGG 2 cut(s) 87, 535
BstF5I GGATG 3 cut(s) 291, 627, 1030
BstHHI GCGC 1 cut(s) 235
BstKTI GATC 3 cut(s) 265, 429, 533
BstMAI GTCTC 2 cut(s) 97, 439
BstMBI GATC 3 cut(s) 262, 426, 530
BstMWI GCNNNNNNNGC 4 cut(s) 161, 170, 308, 551
BstSCI CCNGG 2 cut(s) 577, 794
BstV1I GCAGC 4 cut(s) 222, 566, 772, 889
BstX2I RGATCY 1 cut(s) 530
BstYI RGATCY 1 cut(s) 530
BsuRI GGCC 5 cut(s) 199, 338, 356, 617, 978
BtgI CCRYGG 2 cut(s) 87, 535
BtgZI GCGATG 2 cut(s) 145, 572
BtrI CACGTC 1 cut(s) 297
BtsCI GGATG 3 cut(s) 291, 627, 1030
BtsI GCAGTG 1 cut(s) 150
BtsIMutI CAGTG 4 cut(s) 150, 568, 644, 984
CciI TCATGA 1 cut(s) 450
CfoI GCGC 1 cut(s) 235
Cfr10I RCCGGY 5 cut(s) 68, 253, 617, 1072, 1082
Cfr13I GGNCC 5 cut(s) 198, 467, 615, 854, 976
Csp6I GTAC 4 cut(s) 76, 395, 655, 734
CspAI ACCGGT 2 cut(s) 1072, 1082
CviAII CATG 6 cut(s) 88, 104, 109, 140, 182, 451
CviQI GTAC 4 cut(s) 76, 395, 655, 734
DdeI CTNAG 3 cut(s) 37, 663, 1093
DpnI GATC 3 cut(s) 264, 428, 532
DpnII GATC 3 cut(s) 262, 426, 530
DraIII CACNNNGTG 1 cut(s) 887
DrdI GACNNNNNNGTC 1 cut(s) 295
DseDI GACNNNNNNGTC 1 cut(s) 295
EaeI YGGCCR 2 cut(s) 336, 354
Eam1104I CTCTTC 1 cut(s) 782
EarI CTCTTC 1 cut(s) 782
Eco130I CCWWGG 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 97
Eco32I GATATC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 467, 854
Eco57I CTGAAG 1 cut(s) 668
EcoRV GATATC 1 cut(s) 48
EcoT14I CCWWGG 1 cut(s) 87
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 6 cut(s) 91, 107, 112, 143, 185, 454
FatI CATG 6 cut(s) 87, 103, 108, 139, 181, 450
FbaI TGATCA 2 cut(s) 262, 426
Fnu4HI GCNGC 7 cut(s) 236, 552, 555, 783, 786, 903, 1098
FokI GGATG 3 cut(s) 298, 614, 1037
Fsp4HI GCNGC 7 cut(s) 236, 552, 555, 783, 786, 903, 1098
FspBI CTAG 1 cut(s) 125
GlaI GCGC 1 cut(s) 234
GluI GCNGC 7 cut(s) 236, 552, 555, 783, 786, 903, 1098
GsaI CCCAGC 1 cut(s) 662
GsuI CTGGAG 1 cut(s) 1127
HaeIII GGCC 5 cut(s) 199, 338, 356, 617, 978
HhaI GCGC 1 cut(s) 235
Hin1II CATG 6 cut(s) 91, 107, 112, 143, 185, 454
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HincII GTYRAC 1 cut(s) 478
HindII GTYRAC 1 cut(s) 478
HinfI GANTC 4 cut(s) 454, 489, 574, 767
HphI GGTGA 4 cut(s) 76, 334, 436, 811
Hpy166II GTNNAC 3 cut(s) 382, 478, 642
Hpy188I TCNGA 6 cut(s) 215, 267, 488, 928, 944, 1053
Hpy188III TCNNGA 5 cut(s) 283, 438, 451, 810, 1130
Hpy8I GTNNAC 3 cut(s) 382, 478, 642
Hpy99I CGWCG 2 cut(s) 284, 682
HpyAV CCTTC 5 cut(s) 341, 355, 385, 701, 1118
HpyCH4III ACNGT 5 cut(s) 424, 433, 539, 733, 988
HpyCH4IV ACGT 8 cut(s) 120, 209, 279, 296, 680, 701, 736, 825
HpyCH4V TGCA 6 cut(s) 55, 143, 524, 545, 829, 1041
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 170, 308, 551
HpyF3I CTNAG 3 cut(s) 37, 663, 1093
HpySE526I ACGT 8 cut(s) 120, 209, 279, 296, 680, 701, 736, 825
Hsp92II CATG 6 cut(s) 91, 107, 112, 143, 185, 454
HspAI GCGC 1 cut(s) 233
Kpn2I TCCGGA 1 cut(s) 437
Ksp22I TGATCA 2 cut(s) 262, 426
Kzo9I GATC 3 cut(s) 262, 426, 530
LmnI GCTCC 3 cut(s) 169, 440, 548
Lsp1109I GCAGC 4 cut(s) 222, 566, 772, 889
MaeI CTAG 1 cut(s) 125
MaeII ACGT 8 cut(s) 120, 209, 279, 296, 680, 701, 736, 825
MaeIII GTNAC 2 cut(s) 727, 737
MalI GATC 3 cut(s) 264, 428, 532
MbiI CCGCTC 1 cut(s) 551
MboI GATC 3 cut(s) 262, 426, 530
MboII GAAGA 4 cut(s) 612, 616, 769, 1046
MfeI CAATTG 1 cut(s) 144
MflI RGATCY 1 cut(s) 530
MhlI GDGCHC 1 cut(s) 445
MlsI TGGCCA 1 cut(s) 356
MluCI AATT 2 cut(s) 144, 228
MluNI TGGCCA 1 cut(s) 356
MlyI GAGTC 2 cut(s) 448, 761
MnlI CCTC 9 cut(s) 233, 281, 494, 497, 500, 503, 521, 845, 1126
Mox20I TGGCCA 1 cut(s) 356
MroI TCCGGA 1 cut(s) 437
MroXI GAANNNNTTC 1 cut(s) 933
MscI TGGCCA 1 cut(s) 356
MseI TTAA 9 cut(s) 14, 99, 387, 674, 683, 692, 876, 1056, 1068
MslI CAYNNNNRTG 1 cut(s) 540
Msp20I TGGCCA 1 cut(s) 356
MspA1I CMGCKG 3 cut(s) 662, 716, 785
MspCI CTTAAG 1 cut(s) 98
MspR9I CCNGG 2 cut(s) 579, 796
MunI CAATTG 1 cut(s) 144
Mva1269I GAATGC 1 cut(s) 933
MwoI GCNNNNNNNGC 4 cut(s) 161, 170, 308, 551
NciI CCSGG 2 cut(s) 579, 796
NcoI CCATGG 1 cut(s) 87
NdeII GATC 3 cut(s) 262, 426, 530
NlaIII CATG 6 cut(s) 91, 107, 112, 143, 185, 454
NlaIV GGNNCC 3 cut(s) 468, 532, 712
NmuCI GTSAC 1 cut(s) 737
OliI CACNNNNGTG 1 cut(s) 540
PagI TCATGA 1 cut(s) 450
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 815
PctI GAATGC 1 cut(s) 933
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 2 cut(s) 489, 574
PfoI TCCNGGA 1 cut(s) 577
PinAI ACCGGT 2 cut(s) 1072, 1082
PkrI GCNGC 7 cut(s) 237, 553, 556, 784, 787, 904, 1099
PleI GAGTC 2 cut(s) 448, 761
PpsI GAGTC 2 cut(s) 448, 761
Ppu21I YACGTR 2 cut(s) 737, 826
PsiI TTATAA 2 cut(s) 896, 968
Psp1406I AACGTT 1 cut(s) 701
PspFI CCCAGC 1 cut(s) 658
PspN4I GGNNCC 3 cut(s) 468, 532, 712
PspPI GGNCC 5 cut(s) 198, 467, 615, 854, 976
PsrI GAACNNNNNNTAC 2 cut(s) 260, 292
PsuI RGATCY 1 cut(s) 530
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 4 cut(s) 77, 396, 656, 735
RsaNI GTAC 4 cut(s) 76, 395, 655, 734
RseI CAYNNNNRTG 1 cut(s) 540
SaqAI TTAA 9 cut(s) 14, 99, 387, 674, 683, 692, 876, 1056, 1068
SatI GCNGC 7 cut(s) 236, 552, 555, 783, 786, 903, 1098
Sau3AI GATC 3 cut(s) 262, 426, 530
Sau96I GGNCC 5 cut(s) 198, 467, 615, 854, 976
SchI GAGTC 2 cut(s) 448, 761
ScrFI CCNGG 2 cut(s) 579, 796
SduI GDGCHC 1 cut(s) 445
SinI GGWCC 2 cut(s) 467, 854
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 3 cut(s) 98, 742, 1155
SmoI CTYRAG 3 cut(s) 98, 742, 1155
Sse9I AATT 2 cut(s) 144, 228
SsiI CCGC 5 cut(s) 495, 551, 714, 783, 1098
SspI AATATT 1 cut(s) 219
SspMI CTAG 1 cut(s) 125
StyD4I CCNGG 2 cut(s) 577, 794
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 5 cut(s) 424, 433, 539, 733, 988
TaiI ACGT 8 cut(s) 123, 212, 282, 299, 683, 704, 739, 828
TaqI TCGA 1 cut(s) 765
TasI AATT 2 cut(s) 144, 228
TatI WGTACW 1 cut(s) 75
TauI GCSGC 3 cut(s) 554, 785, 1100
TfiI GAWTC 2 cut(s) 489, 574
Tru1I TTAA 9 cut(s) 14, 99, 387, 674, 683, 692, 876, 1056, 1068
Tru9I TTAA 9 cut(s) 14, 99, 387, 674, 683, 692, 876, 1056, 1068
TscAI CASTG 4 cut(s) 157, 575, 651, 991
TseFI GTSAC 1 cut(s) 737
TseI GCWGC 4 cut(s) 235, 554, 785, 902
Tsp45I GTSAC 1 cut(s) 737
TspDTI ATGAA 7 cut(s) 32, 125, 198, 616, 711, 926, 1127
TspGWI ACGGA 1 cut(s) 1037
TspRI CASTG 4 cut(s) 157, 575, 651, 991
Vha464I CTTAAG 1 cut(s) 98
VpaK11BI GGWCC 2 cut(s) 467, 854
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.