Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003116

Physical Location & Seq

Genomic Coordinates Reverse (-)

39764885 .. 39766945

Gene Structure 2061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0252000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGAGCACGGAGGAAAGCCCATGAAAATGAAAGTCAAGTTTTTCGACGATCAAGTCCCAAAGGCCTCAGACTCAGATGCCATGGCTCTACCTCTCTACATCACCAACGCTGGGTTTTTCACCCTCTTCTTCTCCGTTGTCTACTTCTTGCTCATTAGCTGGCGCGAGAAGATTCGTACCAACACTCCTCTTCACATCATTGATCTCTCTGAGATTGTTGCCATCCTTGCTCTTGTAGCCTCCTTCATCTATCTCCTCGGCTTCTTCGGCATCGATTTTGTTCGGTCCCTCTTTCTGCAGCCCAGTAGTGACATCTGGGCCGCCGACGATGACGAGGAAGAGATTATTCTCAAGGAGGATGCTCGTAAGGTTCCTTGTGGCCAGGCCCTTGATTGTTCATTTCCCGAAATTGCTCCAATTGCTTCATCTAAAGTTTCCCCGAAATTGTTGGATGAAAAACCAGCAATCCAGACCCCACCACCAACCGAAGAAGACGAAGAGATTATCAAGGCTGTGGTGGCTGGAACCATTCCTTCATACTCACTGGAGTCAAAGCTAGGAGATTGCAAGAGGGCAGCTTCTATTAGGCGTGAGGCTTTGCAGAGAGTTACAGGCAAGTCTTTGGAGGGTTTGCCTTTGGAGGGCTTTGATTATGAATCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGGTATATTACCATTCCTATTGGGATTGCTGGGCCTCTTATGCTTGATGGAAGAGAGTTCTCTGTCCCCATGGCCACAACTGAAGGGTGCTTGGTGGCTAGTACTAACCGTGGTTGCAAAGCTATTAACTTGTCCGGTGGAGCTACCAGTGTGCTATTGAAAGATGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCTGCTAAAAGAGCTGCTGAATTGAAGTTTTTCATGGAAGACCCTGCCAATTACGAAACCATTTCCATGGTCTTCAACAAATCAAGCAGATTTGGTAGACTTCAAACTGTGAAGTGTGCAGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGCACAGGCGATGCTATGGGGATGAACATGGTCTCCAAAGGTGTTCAAAATGTCCTCGACTTCCTTCAGAATGACTTCCCTGACATGGATGTAATTGGCATCTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAATCTGTGGTGTGTGAGGCTGTGATCAAGGGAGACATAGTGAGTAAGGTGTTGAAAACCAATGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGTTCTGCCGTTGCTGGTGCTCTAGGTGGTTTCAATGCTCATGCTAGTAACATTGTTTCTGCAGTCTATCTAGCTACTGGTCAAGACCCGGCTCAGAACATTGAGAGTTCTCACTGTATTACCATGATGGAAGCCATCAATGATGGAAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACAGTAGGAGGAGGTACCCAACTTGCATCACAGTCCGCTTGTTTGAACTTGCTTGGAGTGAAGGGAGCTAACAGAGAAGCACCAGGATCAAATGCAAGGCAGTTGGCCAGTGTTGTAGCTGGTTCTGTTCTTGCTGGAGAGCTATCTCTCATGTCTGCCATTGCAGCTGGACAGCTCGTCAAGAGTCACATGAAGTACAACCGATCGAACAAAGATGTTACAGCTGTTGCTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007154 GO:0007165 GO:0008150 GO:0008509 GO:0008514 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0015075 GO:0015171 GO:0015179 GO:0015318 GO:0015562 GO:0015711 GO:0015807 GO:0015849 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0032973 GO:0034220 GO:0034639 GO:0042221 GO:0042592 GO:0043090 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055081 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071702 GO:0071705 GO:0071944 GO:0080144 GO:0098656 GO:0099568 GO:0140115 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

580

Amino Acids

61.98

Weight (kDa)

5.61

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	193 - 569	5.8e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21890 AT1G21890 AT1G44800 AT4G08300
fragaria_vesca	FvH4_2g26691 FvH4_2g26691 FvH4_2g26691 FvH4_2g26700
malus_domestica	MD00G1157200.v1.1 MD15G1351700.v1.1 MD15G1351800.v1.1
prunus_persica	Prupe.1G500400_v2.0.a1 Prupe.1G500400_v2.0.a1 Prupe.1G500500_v2.0.a1
pyrus_communis	pycom08g14190 pycom15g31510
rosa_chinensis	RchiOBHm_Chr6g0295541 RchiOBHm_Chr6g0295571
rosa_laevigata	RLG00000011789 RLG00000011792
rosa_multiflora	Rmu_sc0005000.1_g000009 Rmu_sc0005000.1_g000012
rosa_roxburghii	Rroxscaffold_7G00172360 Rroxscaffold_7G00172380
rosa_rugosa	Rorug06G0251800 Rorug06G0251900 Rorug06G0252000 Rorug06G0252100
rosa_samantha	Rh6AG365000 Rh6AG365200 Rh6BG373400 Rh6CG379600 Rh6CG379800 Rh6DG366100 Rh6DG366400
rosa_wichuraiana	Rw6G031880 Rw6G031890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	53
Acc65I	GGTACC	1 cut(s)	1517
AccB1I	GGYRCC	1 cut(s)	1517
AccI	GTMKAC	2 cut(s)	141, 985
AccII	CGCG	1 cut(s)	165
AciI	CCGC	3 cut(s)	321, 1274, 1539
AclWI	GGATC	3 cut(s)	1199, 1470, 1597
AcoI	YGGCCR	3 cut(s)	379, 762, 1608
AcuI	CTGAAG	2 cut(s)	792, 1094
AfaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
AfiI	CCNNNNNNNGG	3 cut(s)	111, 641, 1129
AgsI	TTSAA	9 cut(s)	850, 886, 913, 964, 992, 1091, 1261, 1345, 1549
AhdI	GACNNNNNGTC	1 cut(s)	1679
AjiI	CACGTC	1 cut(s)	1471
AjnI	CCWGG	2 cut(s)	381, 1585
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
AloI	GAACNNNNNNTCC	2 cut(s)	1061, 1093
Alw21I	GWGCWC	3 cut(s)	9, 871, 1333
Alw26I	GTCTC	3 cut(s)	1081, 1233, 1477
AlwI	GGATC	3 cut(s)	1199, 1470, 1597
AlwNI	CAGNNNCTG	1 cut(s)	1013
AoxI	GGCC	9 cut(s)	63, 318, 379, 384, 722, 762, 1198, 1275, 1608
ApeKI	GCWGC	7 cut(s)	298, 575, 902, 1041, 1044, 1178, 1667
Asp700I	GAANNNNTTC	2 cut(s)	917, 1118
Asp718I	GGTACC	1 cut(s)	1517
AspLEI	GCGC	1 cut(s)	165
AspS9I	GGNCC	4 cut(s)	285, 318, 385, 722
AsuC2I	CCSGG	1 cut(s)	1400
AsuHPI	GGTGA	2 cut(s)	94, 112
AvaII	GGWCC	1 cut(s)	285
BalI	TGGCCA	3 cut(s)	381, 764, 1610
BanI	GGYRCC	1 cut(s)	1517
BarI	GAAGNNNNNNTAC	2 cut(s)	1010, 1042
BbsI	GAAGAC	3 cut(s)	498, 933, 952
Bbv12I	GWGCWC	3 cut(s)	9, 871, 1333
BbvI	GCAGC	7 cut(s)	310, 587, 889, 1028, 1056, 1165, 1679
BccI	CCATC	6 cut(s)	230, 731, 848, 1432, 1448, 1454
BceAI	ACGGC	2 cut(s)	1185, 1304
BciT130I	CCWGG	2 cut(s)	383, 1587
BclI	TGATCA	1 cut(s)	1230
BcnI	CCSGG	1 cut(s)	1400
BcoDI	GTCTC	3 cut(s)	1081, 1233, 1477
BfaI	CTAG	5 cut(s)	557, 789, 1334, 1356, 1382
BfmI	CTRYAG	3 cut(s)	296, 1042, 1371
BisI	GCNGC	9 cut(s)	299, 321, 576, 903, 1042, 1045, 1179, 1275, 1668
BlsI	GCNGC	9 cut(s)	300, 322, 577, 904, 1043, 1046, 1180, 1276, 1669
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	3 cut(s)	383, 1400, 1587
Bme18I	GGWCC	1 cut(s)	285
BmeRI	GACNNNNNGTC	1 cut(s)	1679
BmgBI	CACGTC	1 cut(s)	1471
BmgT120I	GGNCC	4 cut(s)	285, 318, 385, 722
BmiI	GGNNCC	4 cut(s)	287, 372, 526, 1519
BmrFI	CCNGG	3 cut(s)	383, 1400, 1587
BmrI	ACTGGG	1 cut(s)	297
BmsI	GCATC	6 cut(s)	67, 279, 349, 1045, 1152, 1538
BmuI	ACTGGG	1 cut(s)	297
BpiI	GAAGAC	3 cut(s)	498, 933, 952
BpmI	CTGGAG	2 cut(s)	566, 1659
BpuEI	CTTGAG	2 cut(s)	335, 1283
BpuMI	CCSGG	1 cut(s)	1400
Bsa29I	ATCGAT	1 cut(s)	273
BsaI	GGTCTC	1 cut(s)	1081
BsaJI	CCNNGG	7 cut(s)	81, 256, 759, 799, 954, 1201, 1278
BsaWI	WCCGGW	1 cut(s)	824
BsaXI	ACNNNNNCTCC	6 cut(s)	169, 199, 1061, 1091, 1230, 1260
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 641, 1129
Bse1I	ACTGG	8 cut(s)	303, 549, 686, 837, 1193, 1315, 1393, 1611
Bse3DI	GCAATG	1 cut(s)	1662
BseBI	CCWGG	2 cut(s)	383, 1587
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	7 cut(s)	81, 256, 759, 799, 954, 1201, 1278
BseGI	GGATG	5 cut(s)	222, 364, 457, 1071, 1138
BseLI	CCNNNNNNNGG	3 cut(s)	111, 641, 1129
BseMI	GCAATG	1 cut(s)	1662
BseMII	CTCAG	6 cut(s)	81, 87, 201, 1176, 1418, 1488
BseNI	ACTGG	8 cut(s)	303, 549, 686, 837, 1193, 1315, 1393, 1611
BseRI	GAGGAG	3 cut(s)	177, 245, 1527
BseXI	GCAGC	7 cut(s)	310, 587, 889, 1028, 1056, 1165, 1679
BseYI	CCCAGC	3 cut(s)	110, 719, 1013
BsgI	GTGCAG	1 cut(s)	1026
Bsh1236I	CGCG	1 cut(s)	165
Bsh1285I	CGRYCG	1 cut(s)	1709
BshFI	GGCC	9 cut(s)	65, 320, 381, 386, 724, 764, 1200, 1277, 1610
BshNI	GGYRCC	1 cut(s)	1517
BshVI	ATCGAT	1 cut(s)	273
BsiEI	CGRYCG	1 cut(s)	1709
BsiHKAI	GWGCWC	3 cut(s)	9, 871, 1333
BsiSI	CCGG	2 cut(s)	825, 1400
BslFI	GGGAC	3 cut(s)	41, 271, 740
BslI	CCNNNNNNNGG	3 cut(s)	111, 641, 1129
BsmAI	GTCTC	3 cut(s)	1081, 1233, 1477
BsmBI	CGTCTC	1 cut(s)	1477
BsmFI	GGGAC	3 cut(s)	41, 271, 740
BsnI	GGCC	9 cut(s)	65, 320, 381, 386, 724, 764, 1200, 1277, 1610
Bso31I	GGTCTC	1 cut(s)	1081
Bsp1286I	GDGCHC	3 cut(s)	9, 871, 1333
Bsp1407I	TGTACA	1 cut(s)	1026
Bsp143I	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
Bsp19I	CCATGG	3 cut(s)	81, 759, 954
BspACI	CCGC	3 cut(s)	321, 1274, 1539
BspANI	GGCC	9 cut(s)	65, 320, 381, 386, 724, 764, 1200, 1277, 1610
BspCNI	CTCAG	6 cut(s)	80, 86, 202, 1175, 1417, 1487
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	165
BspLI	GGNNCC	4 cut(s)	287, 372, 526, 1519
BspMAI	CTGCAG	3 cut(s)	300, 1046, 1375
BspPI	GGATC	3 cut(s)	1199, 1470, 1597
BspT107I	GGYRCC	1 cut(s)	1517
BspTNI	GGTCTC	1 cut(s)	1081
BsrDI	GCAATG	1 cut(s)	1662
BsrGI	TGTACA	1 cut(s)	1026
BsrI	ACTGG	8 cut(s)	303, 549, 686, 837, 1193, 1315, 1393, 1611
BssECI	CCNNGG	7 cut(s)	81, 256, 759, 799, 954, 1201, 1278
BssMI	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
BssT1I	CCWWGG	4 cut(s)	81, 759, 954, 1278
Bst2UI	CCWGG	2 cut(s)	383, 1587
Bst4CI	ACNGT	5 cut(s)	800, 997, 1427, 1507, 1536
Bst6I	CTCTTC	5 cut(s)	131, 195, 333, 492, 736
BstAUI	TGTACA	1 cut(s)	1026
BstC8I	GCNNGC	2 cut(s)	161, 1176
BstDEI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
BstDSI	CCRYGG	5 cut(s)	81, 759, 799, 954, 1201
BstF5I	GGATG	5 cut(s)	222, 364, 457, 1071, 1138
BstFNI	CGCG	1 cut(s)	165
BstHHI	GCGC	1 cut(s)	165
BstKTI	GATC	7 cut(s)	52, 205, 1194, 1233, 1465, 1592, 1709
BstMAI	GTCTC	3 cut(s)	1081, 1233, 1477
BstMBI	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
BstMCI	CGRYCG	1 cut(s)	1709
BstNI	CCWGG	2 cut(s)	383, 1587
BstNSI	RCATGY	1 cut(s)	1297
BstSCI	CCNGG	3 cut(s)	381, 1398, 1585
BstSFI	CTRYAG	3 cut(s)	296, 1042, 1371
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	7 cut(s)	310, 587, 889, 1028, 1056, 1165, 1679
BstV2I	GAAGAC	3 cut(s)	498, 933, 952
BstX2I	RGATCY	1 cut(s)	1462
BstXI	CCANNNNNNTGG	1 cut(s)	955
BstYI	RGATCY	1 cut(s)	1462
Bsu15I	ATCGAT	1 cut(s)	273
BsuRI	GGCC	9 cut(s)	65, 320, 381, 386, 724, 764, 1200, 1277, 1610
BsuTUI	ATCGAT	1 cut(s)	273
BtgI	CCRYGG	5 cut(s)	81, 759, 799, 954, 1201
BtgZI	GCGATG	1 cut(s)	1068
BtrI	CACGTC	1 cut(s)	1471
BtsCI	GGATG	5 cut(s)	222, 364, 457, 1071, 1138
BtsIMutI	CAGTG	5 cut(s)	542, 844, 1423, 1482, 1618
Cac8I	GCNNGC	2 cut(s)	161, 1176
CaiI	CAGNNNCTG	1 cut(s)	1013
CfoI	GCGC	1 cut(s)	165
Cfr13I	GGNCC	4 cut(s)	285, 318, 385, 722
ClaI	ATCGAT	1 cut(s)	273
Csp6I	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
CviQI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
DdeI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
DpnI	GATC	7 cut(s)	51, 204, 1193, 1232, 1464, 1591, 1708
DpnII	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
DrdI	GACNNNNNNGTC	1 cut(s)	53
DriI	GACNNNNNGTC	1 cut(s)	1679
DseDI	GACNNNNNNGTC	1 cut(s)	53
EaeI	YGGCCR	3 cut(s)	379, 762, 1608
Eam1104I	CTCTTC	5 cut(s)	131, 195, 333, 492, 736
Eam1105I	GACNNNNNGTC	1 cut(s)	1679
EarI	CTCTTC	5 cut(s)	131, 195, 333, 492, 736
Eco130I	CCWWGG	4 cut(s)	81, 759, 954, 1278
Eco147I	AGGCCT	1 cut(s)	65
Eco31I	GGTCTC	1 cut(s)	1081
Eco47I	GGWCC	1 cut(s)	285
Eco57I	CTGAAG	2 cut(s)	792, 1094
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	2 cut(s)	381, 1585
EcoT14I	CCWWGG	4 cut(s)	81, 759, 954, 1278
ErhI	CCWWGG	4 cut(s)	81, 759, 954, 1278
Esp3I	CGTCTC	1 cut(s)	1477
FaqI	GGGAC	3 cut(s)	41, 271, 740
FbaI	TGATCA	1 cut(s)	1230
FblI	GTMKAC	2 cut(s)	141, 985
Fnu4HI	GCNGC	9 cut(s)	299, 321, 576, 903, 1042, 1045, 1179, 1275, 1668
FokI	GGATG	5 cut(s)	209, 371, 464, 1078, 1145
Fsp4HI	GCNGC	9 cut(s)	299, 321, 576, 903, 1042, 1045, 1179, 1275, 1668
FspBI	CTAG	5 cut(s)	557, 789, 1334, 1356, 1382
GlaI	GCGC	1 cut(s)	164
GluI	GCNGC	9 cut(s)	299, 321, 576, 903, 1042, 1045, 1179, 1275, 1668
GsaI	CCCAGC	3 cut(s)	114, 723, 1017
GsuI	CTGGAG	2 cut(s)	566, 1659
HaeIII	GGCC	9 cut(s)	65, 320, 381, 386, 724, 764, 1200, 1277, 1610
HapII	CCGG	2 cut(s)	825, 1400
HhaI	GCGC	1 cut(s)	165
Hin6I	GCGC	1 cut(s)	163
HinP1I	GCGC	1 cut(s)	163
HincII	GTYRAC	1 cut(s)	1186
HindII	GTYRAC	1 cut(s)	1186
HinfI	GANTC	7 cut(s)	71, 172, 548, 656, 882, 1035, 1687
HpaII	CCGG	2 cut(s)	825, 1400
HphI	GGTGA	2 cut(s)	94, 112
Hpy166II	GTNNAC	3 cut(s)	142, 986, 1186
Hpy188I	TCNGA	7 cut(s)	70, 76, 211, 881, 1113, 1165, 1407
Hpy188III	TCNNGA	5 cut(s)	404, 469, 1300, 1394, 1684
Hpy8I	GTNNAC	3 cut(s)	142, 986, 1186
Hpy99I	CGWCG	2 cut(s)	50, 329
HpyAV	CCTTC	7 cut(s)	253, 543, 767, 1118, 1190, 1497, 1558
HpyCH4III	ACNGT	5 cut(s)	800, 997, 1427, 1507, 1536
HpyCH4IV	ACGT	1 cut(s)	1470
HpyF3I	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
HpySE526I	ACGT	1 cut(s)	1470
HspAI	GCGC	1 cut(s)	163
KpnI	GGTACC	1 cut(s)	1521
Ksp22I	TGATCA	1 cut(s)	1230
Kzo9I	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
LmnI	GCTCC	5 cut(s)	4, 418, 830, 1285, 1568
Lsp1109I	GCAGC	7 cut(s)	310, 587, 889, 1028, 1056, 1165, 1679
LweI	GCATC	6 cut(s)	67, 279, 349, 1045, 1152, 1538
MaeI	CTAG	5 cut(s)	557, 789, 1334, 1356, 1382
MaeII	ACGT	1 cut(s)	1470
MaeIII	GTNAC	7 cut(s)	308, 607, 1151, 1358, 1477, 1688, 1720
MalI	GATC	7 cut(s)	51, 204, 1193, 1232, 1464, 1591, 1708
MboI	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
MfeI	CAATTG	1 cut(s)	417
MflI	RGATCY	1 cut(s)	1462
MhlI	GDGCHC	3 cut(s)	9, 871, 1333
MlsI	TGGCCA	3 cut(s)	381, 764, 1610
MluCI	AATT	6 cut(s)	408, 417, 443, 908, 937, 1137
MluNI	TGGCCA	3 cut(s)	381, 764, 1610
MlyI	GAGTC	3 cut(s)	65, 557, 1696
MmeI	TCCRAC	1 cut(s)	429
Mox20I	TGGCCA	3 cut(s)	381, 764, 1610
MroXI	GAANNNNTTC	2 cut(s)	917, 1118
MscI	TGGCCA	3 cut(s)	381, 764, 1610
MseI	TTAA	3 cut(s)	816, 1290, 1741
MslI	CAYNNNNRTG	2 cut(s)	26, 953
Msp20I	TGGCCA	3 cut(s)	381, 764, 1610
MspA1I	CMGCKG	2 cut(s)	1670, 1727
MspI	CCGG	2 cut(s)	825, 1400
MspR9I	CCNGG	3 cut(s)	383, 1400, 1587
MunI	CAATTG	1 cut(s)	417
MvaI	CCWGG	2 cut(s)	383, 1587
MvnI	CGCG	1 cut(s)	165
NciI	CCSGG	1 cut(s)	1400
NcoI	CCATGG	3 cut(s)	81, 759, 954
NdeII	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
NlaIV	GGNNCC	4 cut(s)	287, 372, 526, 1519
NmeAIII	GCCGAG	1 cut(s)	237
NmuCI	GTSAC	3 cut(s)	308, 1477, 1688
NspI	RCATGY	1 cut(s)	1297
PceI	AGGCCT	1 cut(s)	65
PdmI	GAANNNNTTC	2 cut(s)	917, 1118
PfeI	GAWTC	4 cut(s)	172, 656, 882, 1035
PkrI	GCNGC	9 cut(s)	300, 322, 577, 904, 1043, 1046, 1180, 1276, 1669
Ple19I	CGATCG	1 cut(s)	1709
PleI	GAGTC	3 cut(s)	65, 556, 1695
PpsI	GAGTC	3 cut(s)	65, 556, 1695
Psp6I	CCWGG	2 cut(s)	381, 1585
PspFI	CCCAGC	3 cut(s)	110, 719, 1013
PspGI	CCWGG	2 cut(s)	381, 1585
PspN4I	GGNNCC	4 cut(s)	287, 372, 526, 1519
PspPI	GGNCC	4 cut(s)	285, 318, 385, 722
PstI	CTGCAG	3 cut(s)	300, 1046, 1375
PstNI	CAGNNNCTG	1 cut(s)	1013
PsuI	RGATCY	1 cut(s)	1462
PvuI	CGATCG	1 cut(s)	1709
PvuII	CAGCTG	2 cut(s)	1670, 1727
RsaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
RsaNI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
RseI	CAYNNNNRTG	2 cut(s)	26, 953
SaqAI	TTAA	3 cut(s)	816, 1290, 1741
SatI	GCNGC	9 cut(s)	299, 321, 576, 903, 1042, 1045, 1179, 1275, 1668
Sau3AI	GATC	7 cut(s)	49, 202, 1191, 1230, 1462, 1589, 1706
Sau96I	GGNCC	4 cut(s)	285, 318, 385, 722
ScaI	AGTACT	1 cut(s)	793
SchI	GAGTC	3 cut(s)	65, 557, 1696
ScrFI	CCNGG	3 cut(s)	383, 1400, 1587
SduI	GDGCHC	3 cut(s)	9, 871, 1333
SfaNI	GCATC	6 cut(s)	67, 279, 349, 1045, 1152, 1538
SfcI	CTRYAG	3 cut(s)	296, 1042, 1371
SinI	GGWCC	1 cut(s)	285
SmiMI	CAYNNNNRTG	2 cut(s)	26, 953
SmlI	CTYRAG	2 cut(s)	350, 1298
SmoI	CTYRAG	2 cut(s)	350, 1298
Sse9I	AATT	6 cut(s)	408, 417, 443, 908, 937, 1137
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	3 cut(s)	321, 1274, 1539
SspMI	CTAG	5 cut(s)	557, 789, 1334, 1356, 1382
StuI	AGGCCT	1 cut(s)	65
StyD4I	CCNGG	3 cut(s)	381, 1398, 1585
StyI	CCWWGG	4 cut(s)	81, 759, 954, 1278
TaaI	ACNGT	5 cut(s)	800, 997, 1427, 1507, 1536
TaiI	ACGT	1 cut(s)	1473
TaqI	TCGA	5 cut(s)	45, 273, 1101, 1194, 1709
TaqII	GACCGA	1 cut(s)	273
TasI	AATT	6 cut(s)	408, 417, 443, 908, 937, 1137
TatI	WGTACW	3 cut(s)	791, 1026, 1698
TauI	GCSGC	2 cut(s)	323, 1277
TfiI	GAWTC	4 cut(s)	172, 656, 882, 1035
Tru1I	TTAA	3 cut(s)	816, 1290, 1741
Tru9I	TTAA	3 cut(s)	816, 1290, 1741
TscAI	CASTG	5 cut(s)	549, 844, 1430, 1482, 1618
TseFI	GTSAC	3 cut(s)	308, 1477, 1688
TseI	GCWGC	7 cut(s)	298, 575, 902, 1041, 1044, 1178, 1667
Tsp45I	GTSAC	3 cut(s)	308, 1477, 1688
TspGWI	ACGGA	2 cut(s)	24, 124
TspRI	CASTG	5 cut(s)	549, 844, 1430, 1482, 1618
VpaK11BI	GGWCC	1 cut(s)	285
XceI	RCATGY	1 cut(s)	1297
XmiI	GTMKAC	2 cut(s)	141, 985
XmnI	GAANNNNTTC	2 cut(s)	917, 1118
XspI	CTAG	5 cut(s)	557, 789, 1334, 1356, 1382
ZrmI	AGTACT	1 cut(s)	793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.