FvH4_2g26691

WAT1-related protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
21389938 .. 21393153
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g26691.t2

Sequence Viewer

Length: 1107 bp
ATGGGAGACCAAAGTCCATCTGTGTCTAAGCCAAGTGCGTTTCTCAAAAAAATCAAACCTTATTTGGCTATGGTGTCCCTGCAGTTTGGGTATGCAGGCATGTACATCATAAGCATGGTCTCGTTTAAGCATGGCATGAGTCACTTTGTTTTGTCGGTGTACCGTCACGTCGTTGCCCTCTGTGTCATTGCACCCTTCGCGTTGGTTCTTGAAAGGAAAATAAGACCACGGATGACTCTCCCAATATTCCTCAGAATAATGCTGCTTGGATTTCTTGAGCCAGTTCTGGACCAGAACTTATACTTTCTGGGAATGAAGTACACCTCGGCAACATTTGCATCTGCAGTTGTTAATGTTCTTCCTGCCATAACCTTTATTCTGGCACTTTGCTTCAGGTTAGAGACTGTGAACGTCAAGAAGCTACATAGCCTAGCCAAGGTCATCGGAACGGTGGTGACCTTGTCCGGAGCAATGATCATGACTTTGTACAAAGGCCCTATTATTGATATTGTACGGGGACACTCAAACAGCGCCCAAAGTAGCAGCACCGAGTCAAGCGATCAGCATTGGATCGCTGGCCCCTTGATGCTCATAGCCAGCTGCGGCGGTTGGGCAAGTTTCTTCATCCTACAATCGTTCACGTTGAAGAAGTACCCAGCACAGTTGTCTCTCACTGCCTGGATATGCGTAATGGGTGTGTTGGAGGGTGGAGTAGTGACACTTGTGATGGAACGCAATATGAGCGTTTGGGTTATAGGCTGGGACTCCAGGCTTCTTGCTTCTGTTTACTCTGGAGTGATTTGTTCTGGACTTGCATATTATGTGCAAGGCGTTGTGAATAGAGAACGCGGCCCCGTTTTCGTGACATCTTTCAGCCCTCTTTGCATGATCATCACCGCAGTTCTGGGTGCCATCGTTTTAGCTGAGCAAGTCCACCTCGGAAGTATACTCGGAGCTATTCTCATTGTGTTCGGACTCTACACCGTGGTTTGGGGTAAAAGCAAAGACCCTCTGCCCTTGGACGAGCCCCTGAAAGATGAGAAAGGTTCTGTTAACCACGAACTGCCGGTCACTGCTGCAAATAATAGCATCAACGGACGTACATGA

Protein Analysis

369

Amino Acids

40.11

Weight (kDa)

9.31

Isoelectric Point (pI)

30.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 36 - 173 3.2e-09 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 908
AccI GTMKAC 1 cut(s) 946
AccII CGCG 2 cut(s) 200, 849
AccIII TCCGGA 1 cut(s) 464
AciI CCGC 4 cut(s) 603, 606, 849, 897
AclWI GGATC 1 cut(s) 578
AcuI CTGAAG 1 cut(s) 376
AfaI GTAC 7 cut(s) 104, 161, 320, 488, 513, 653, 1102
AfiI CCNNNNNNNGG 2 cut(s) 436, 990
AgsI TTSAA 2 cut(s) 212, 646
AjiI CACGTC 1 cut(s) 169
AjnI CCWGG 2 cut(s) 677, 767
AluBI AGCT 4 cut(s) 421, 600, 923, 956
AluI AGCT 4 cut(s) 421, 600, 923, 956
Alw26I GTCTC 3 cut(s) 124, 395, 672
AlwI GGATC 1 cut(s) 578
Aor13HI TCCGGA 1 cut(s) 464
AoxI GGCC 3 cut(s) 493, 577, 850
ApeKI GCWGC 4 cut(s) 262, 543, 600, 1076
ArsI GACNNNNNNTTYG 2 cut(s) 1053, 1085
AspLEI GCGC 1 cut(s) 533
AspS9I GGNCC 4 cut(s) 289, 494, 578, 851
AsuHPI GGTGA 2 cut(s) 466, 886
AvaII GGWCC 1 cut(s) 289
BanI GGYRCC 1 cut(s) 908
BanII GRGCYC 1 cut(s) 1029
BbvI GCAGC 4 cut(s) 249, 555, 587, 1063
BccI CCATC 3 cut(s) 25, 721, 920
BciT130I CCWGG 2 cut(s) 679, 769
BclI TGATCA 2 cut(s) 474, 888
BcoDI GTCTC 3 cut(s) 124, 395, 672
BfaI CTAG 1 cut(s) 431
BfmI CTRYAG 2 cut(s) 80, 342
BfoI RGCGCY 1 cut(s) 534
BisI GCNGC 6 cut(s) 263, 544, 601, 604, 850, 1077
BlpI GCTNAGC 1 cut(s) 924
BlsI GCNGC 6 cut(s) 264, 545, 602, 605, 851, 1078
Bme1390I CCNGG 2 cut(s) 679, 769
Bme18I GGWCC 1 cut(s) 289
BmgBI CACGTC 1 cut(s) 169
BmgT120I GGNCC 4 cut(s) 289, 494, 578, 851
BmiI GGNNCC 3 cut(s) 580, 853, 910
BmrFI CCNGG 2 cut(s) 679, 769
BmsI GCATC 3 cut(s) 347, 576, 1098
BoxI GACNNNNGTC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 945, 977
BpmI CTGGAG 2 cut(s) 751, 813
Bpu1102I GCTNAGC 1 cut(s) 924
BpuEI CTTGAG 1 cut(s) 296
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 6 cut(s) 227, 324, 435, 937, 984, 1017
BsaWI WCCGGW 1 cut(s) 464
Bsc4I CCNNNNNNNGG 2 cut(s) 436, 990
Bse118I RCCGGY 1 cut(s) 1066
Bse1I ACTGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 186, 477
BseAI TCCGGA 1 cut(s) 464
BseBI CCWGG 2 cut(s) 679, 769
BseDI CCNNGG 6 cut(s) 227, 324, 435, 937, 984, 1017
BseGI GGATG 2 cut(s) 237, 624
BseLI CCNNNNNNNGG 2 cut(s) 436, 990
BseMI GCAATG 2 cut(s) 186, 477
BseMII CTCAG 2 cut(s) 265, 915
BseNI ACTGG 1 cut(s) 281
BseXI GCAGC 4 cut(s) 249, 555, 587, 1063
BseYI CCCAGC 2 cut(s) 655, 759
Bsh1236I CGCG 2 cut(s) 200, 849
BshFI GGCC 3 cut(s) 495, 579, 852
BshNI GGYRCC 1 cut(s) 908
BsiSI CCGG 2 cut(s) 465, 1067
BslFI GGGAC 3 cut(s) 61, 531, 776
BslI CCNNNNNNNGG 2 cut(s) 436, 990
BsmAI GTCTC 3 cut(s) 124, 395, 672
BsmFI GGGAC 3 cut(s) 61, 531, 776
BsnI GGCC 3 cut(s) 495, 579, 852
Bso31I GGTCTC 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 1029
Bsp13I TCCGGA 1 cut(s) 464
Bsp1407I TGTACA 2 cut(s) 102, 486
Bsp143I GATC 4 cut(s) 474, 559, 570, 888
Bsp1720I GCTNAGC 1 cut(s) 924
BspACI CCGC 4 cut(s) 603, 606, 849, 897
BspANI GGCC 3 cut(s) 495, 579, 852
BspCNI CTCAG 2 cut(s) 264, 916
BspEI TCCGGA 1 cut(s) 464
BspFNI CGCG 2 cut(s) 200, 849
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 3 cut(s) 580, 853, 910
BspMAI CTGCAG 2 cut(s) 84, 346
BspPI GGATC 1 cut(s) 578
BspT107I GGYRCC 1 cut(s) 908
BspTNI GGTCTC 1 cut(s) 124
BsrDI GCAATG 2 cut(s) 186, 477
BsrFI RCCGGY 1 cut(s) 1066
BsrGI TGTACA 2 cut(s) 102, 486
BsrI ACTGG 1 cut(s) 281
BssAI RCCGGY 1 cut(s) 1066
BssECI CCNNGG 6 cut(s) 227, 324, 435, 937, 984, 1017
BssMI GATC 4 cut(s) 474, 559, 570, 888
BssNAI GTATAC 1 cut(s) 947
BssT1I CCWWGG 2 cut(s) 435, 1017
Bst1107I GTATAC 1 cut(s) 947
Bst2UI CCWGG 2 cut(s) 679, 769
Bst4CI ACNGT 5 cut(s) 164, 406, 451, 663, 985
BstAPI GCANNNNNTGC 1 cut(s) 335
BstAUI TGTACA 2 cut(s) 102, 486
BstC8I GCNNGC 3 cut(s) 97, 577, 598
BstDEI CTNAG 3 cut(s) 27, 251, 924
BstDSI CCRYGG 2 cut(s) 227, 984
BstEII GGTNACC 1 cut(s) 454
BstENI CCTNNNNNAGG 1 cut(s) 434
BstF5I GGATG 2 cut(s) 237, 624
BstFNI CGCG 2 cut(s) 200, 849
BstH2I RGCGCY 1 cut(s) 534
BstHHI GCGC 1 cut(s) 533
BstKTI GATC 4 cut(s) 477, 562, 573, 891
BstMAI GTCTC 3 cut(s) 124, 395, 672
BstMBI GATC 4 cut(s) 474, 559, 570, 888
BstMWI GCNNNNNNNGC 4 cut(s) 197, 335, 741, 882
BstNI CCWGG 2 cut(s) 679, 769
BstNSI RCATGY 1 cut(s) 103
BstPAI GACNNNNGTC 1 cut(s) 12
BstPI GGTNACC 1 cut(s) 454
BstSCI CCNGG 2 cut(s) 677, 767
BstSFI CTRYAG 2 cut(s) 80, 342
BstUI CGCG 2 cut(s) 200, 849
BstV1I GCAGC 4 cut(s) 249, 555, 587, 1063
BstZ17I GTATAC 1 cut(s) 947
BsuRI GGCC 3 cut(s) 495, 579, 852
BtgI CCRYGG 2 cut(s) 227, 984
BtrI CACGTC 1 cut(s) 169
BtsCI GGATG 2 cut(s) 237, 624
BtsI GCAGTG 2 cut(s) 672, 1071
BtsIMutI CAGTG 2 cut(s) 672, 1071
Cac8I GCNNGC 3 cut(s) 97, 577, 598
CciI TCATGA 1 cut(s) 477
CfoI GCGC 1 cut(s) 533
Cfr10I RCCGGY 1 cut(s) 1066
Cfr13I GGNCC 4 cut(s) 289, 494, 578, 851
Csp6I GTAC 7 cut(s) 103, 160, 319, 487, 512, 652, 1101
CviAII CATG 7 cut(s) 100, 115, 131, 136, 478, 886, 1104
CviQI GTAC 7 cut(s) 103, 160, 319, 487, 512, 652, 1101
DdeI CTNAG 3 cut(s) 27, 251, 924
DpnI GATC 4 cut(s) 476, 561, 572, 890
DpnII GATC 4 cut(s) 474, 559, 570, 888
Eco130I CCWWGG 2 cut(s) 435, 1017
Eco24I GRGCYC 1 cut(s) 1029
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 289
Eco57I CTGAAG 1 cut(s) 376
Eco91I GGTNACC 1 cut(s) 454
EcoNI CCTNNNNNAGG 1 cut(s) 434
EcoO109I RGGNCCY 1 cut(s) 494
EcoO65I GGTNACC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 677, 767
EcoT14I CCWWGG 2 cut(s) 435, 1017
EcoT38I GRGCYC 1 cut(s) 1029
ErhI CCWWGG 2 cut(s) 435, 1017
FaeI CATG 7 cut(s) 103, 118, 134, 139, 481, 889, 1107
FaqI GGGAC 3 cut(s) 61, 531, 776
FatI CATG 7 cut(s) 99, 114, 130, 135, 477, 885, 1103
FbaI TGATCA 2 cut(s) 474, 888
FblI GTMKAC 1 cut(s) 946
Fnu4HI GCNGC 6 cut(s) 263, 544, 601, 604, 850, 1077
FokI GGATG 2 cut(s) 244, 611
FriOI GRGCYC 1 cut(s) 1029
Fsp4HI GCNGC 6 cut(s) 263, 544, 601, 604, 850, 1077
FspBI CTAG 1 cut(s) 431
GlaI GCGC 1 cut(s) 532
GluI GCNGC 6 cut(s) 263, 544, 601, 604, 850, 1077
GsaI CCCAGC 2 cut(s) 659, 763
GsuI CTGGAG 2 cut(s) 751, 813
HaeII RGCGCY 1 cut(s) 534
HaeIII GGCC 3 cut(s) 495, 579, 852
HapII CCGG 2 cut(s) 465, 1067
HhaI GCGC 1 cut(s) 533
Hin1II CATG 7 cut(s) 103, 118, 134, 139, 481, 889, 1107
Hin6I GCGC 1 cut(s) 531
HinP1I GCGC 1 cut(s) 531
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HinfI GANTC 5 cut(s) 139, 235, 551, 764, 975
HpaI GTTAAC 1 cut(s) 1054
HpaII CCGG 2 cut(s) 465, 1067
HphI GGTGA 2 cut(s) 466, 886
Hpy166II GTNNAC 8 cut(s) 160, 321, 409, 639, 787, 934, 947, 1054
Hpy188I TCNGA 5 cut(s) 254, 446, 941, 953, 974
Hpy188III TCNNGA 9 cut(s) 209, 275, 287, 415, 465, 478, 792, 807, 862
Hpy8I GTNNAC 8 cut(s) 160, 321, 409, 639, 787, 934, 947, 1054
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 5 cut(s) 164, 406, 451, 663, 985
HpyCH4IV ACGT 4 cut(s) 168, 411, 641, 1099
HpyCH4V TGCA 9 cut(s) 82, 95, 191, 338, 344, 815, 826, 885, 1079
HpyF10VI GCNNNNNNNGC 4 cut(s) 197, 335, 741, 882
HpyF3I CTNAG 3 cut(s) 27, 251, 924
HpySE526I ACGT 4 cut(s) 168, 411, 641, 1099
Hsp92II CATG 7 cut(s) 103, 118, 134, 139, 481, 889, 1107
HspAI GCGC 1 cut(s) 531
Kpn2I TCCGGA 1 cut(s) 464
Ksp22I TGATCA 2 cut(s) 474, 888
KspAI GTTAAC 1 cut(s) 1054
Kzo9I GATC 4 cut(s) 474, 559, 570, 888
LmnI GCTCC 2 cut(s) 467, 953
Lsp1109I GCAGC 4 cut(s) 249, 555, 587, 1063
LweI GCATC 3 cut(s) 347, 576, 1098
MaeI CTAG 1 cut(s) 431
MaeII ACGT 4 cut(s) 168, 411, 641, 1099
MaeIII GTNAC 6 cut(s) 140, 164, 454, 715, 862, 1069
MalI GATC 4 cut(s) 476, 561, 572, 890
MboI GATC 4 cut(s) 474, 559, 570, 888
MboII GAAGA 3 cut(s) 350, 613, 658
MhlI GDGCHC 1 cut(s) 1029
MlyI GAGTC 5 cut(s) 148, 229, 560, 758, 969
MmeI TCCRAC 1 cut(s) 681
MnlI CCTC 7 cut(s) 188, 260, 334, 697, 888, 947, 1020
MroI TCCGGA 1 cut(s) 464
MseI TTAA 3 cut(s) 126, 351, 1053
MslI CAYNNNNRTG 1 cut(s) 113
MspA1I CMGCKG 1 cut(s) 600
MspI CCGG 2 cut(s) 465, 1067
MspR9I CCNGG 2 cut(s) 679, 769
MvaI CCWGG 2 cut(s) 679, 769
MvnI CGCG 2 cut(s) 200, 849
MwoI GCNNNNNNNGC 4 cut(s) 197, 335, 741, 882
NdeII GATC 4 cut(s) 474, 559, 570, 888
NlaIII CATG 7 cut(s) 103, 118, 134, 139, 481, 889, 1107
NlaIV GGNNCC 3 cut(s) 580, 853, 910
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 6 cut(s) 140, 164, 454, 715, 862, 1069
NspI RCATGY 1 cut(s) 103
PagI TCATGA 1 cut(s) 477
PflFI GACNNNGTC 1 cut(s) 460
PkrI GCNGC 6 cut(s) 264, 545, 602, 605, 851, 1078
PleI GAGTC 5 cut(s) 147, 229, 559, 758, 969
PpsI GAGTC 5 cut(s) 147, 229, 559, 758, 969
PshAI GACNNNNGTC 1 cut(s) 12
Psp6I CCWGG 2 cut(s) 677, 767
PspEI GGTNACC 1 cut(s) 454
PspFI CCCAGC 2 cut(s) 655, 759
PspGI CCWGG 2 cut(s) 677, 767
PspN4I GGNNCC 3 cut(s) 580, 853, 910
PspPI GGNCC 4 cut(s) 289, 494, 578, 851
PstI CTGCAG 2 cut(s) 84, 346
PsyI GACNNNGTC 1 cut(s) 460
PvuII CAGCTG 1 cut(s) 600
RsaI GTAC 7 cut(s) 104, 161, 320, 488, 513, 653, 1102
RsaNI GTAC 7 cut(s) 103, 160, 319, 487, 512, 652, 1101
RseI CAYNNNNRTG 1 cut(s) 113
SaqAI TTAA 3 cut(s) 126, 351, 1053
SatI GCNGC 6 cut(s) 263, 544, 601, 604, 850, 1077
Sau3AI GATC 4 cut(s) 474, 559, 570, 888
Sau96I GGNCC 4 cut(s) 289, 494, 578, 851
SchI GAGTC 5 cut(s) 148, 229, 560, 758, 969
ScrFI CCNGG 2 cut(s) 679, 769
SduI GDGCHC 1 cut(s) 1029
SfaNI GCATC 3 cut(s) 347, 576, 1098
SfcI CTRYAG 2 cut(s) 80, 342
SinI GGWCC 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 113
SmlI CTYRAG 1 cut(s) 275
SmoI CTYRAG 1 cut(s) 275
SsiI CCGC 4 cut(s) 603, 606, 849, 897
SspI AATATT 1 cut(s) 246
SspMI CTAG 1 cut(s) 431
StyD4I CCNGG 2 cut(s) 677, 767
StyI CCWWGG 2 cut(s) 435, 1017
TaaI ACNGT 5 cut(s) 164, 406, 451, 663, 985
TaiI ACGT 4 cut(s) 171, 414, 644, 1102
TatI WGTACW 3 cut(s) 102, 318, 486
TauI GCSGC 2 cut(s) 606, 852
Tru1I TTAA 3 cut(s) 126, 351, 1053
Tru9I TTAA 3 cut(s) 126, 351, 1053
TscAI CASTG 2 cut(s) 679, 1078
TseFI GTSAC 6 cut(s) 140, 164, 454, 715, 862, 1069
TseI GCWGC 4 cut(s) 262, 543, 600, 1076
Tsp45I GTSAC 6 cut(s) 140, 164, 454, 715, 862, 1069
TspDTI ATGAA 2 cut(s) 329, 613
TspGWI ACGGA 1 cut(s) 244
TspRI CASTG 2 cut(s) 679, 1078
Tth111I GACNNNGTC 1 cut(s) 460
VpaK11BI GGWCC 1 cut(s) 289
XagI CCTNNNNNAGG 1 cut(s) 434
XceI RCATGY 1 cut(s) 103
XmiI GTMKAC 1 cut(s) 946
XspI CTAG 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.