MD15G1351700.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
41840212 .. 41842687
2476 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1351700.v1.1.491

Sequence Viewer

Length: 1173 bp
ATGGGAGACCAAATTGCAAATGGAAAATTGAGTCTCTTTCTTTATAAGATAAAGCCTTACGTGGCTATGGTTTCTTTGCAATTTGGATATGCAGGAATGTATATTATCAGCATGGTTGGTTTGAAGCGTGGCATCAATCACTTTGTTCTTTCTGTGTACAGGCATTTGATTGCCTTTGCTGTTATTGCACCATTCGCACTTGTCCTTGAAAGGAAAATAAGGCCAAAACTGACTCTTGGGATCTTCCTAAGAATAATGGTGCTTGGTTTTCTCGAGCCTGTTTTTGCTCAGAACTTGTACTTTGTGGGAATGACATACACCTCAGCAACATTTGCATCTGCCACTGCTAATATCCTCCCTGCCATTACCTTCATTTTTGCACTTATTTTCAGGTTAGAAAAAATCAATTTCAAGAGGCTGCCTAGTGTAGCAAAGGTGATCGGGACTGCAATCACAGTCGCAGGAGCGATGGTGATGACGTGGTACAAAGGGCCCATCATTGAACTTATAAGTGGACAATCACAAAGCCACCACACCAGCACCGCATCCGGTGAACAACATTGGGTCACCGGCACCATGATGCTCCTAGCCCGTTCTTGTGGTTGGTCCGGTTTCTTCATTGTACAATCTTTCACACTAAAGCTATACCCAGCCGAGCTCTCTCTCACTGCTTTGATATGCTTAATGGGTGCATTGGAAGGTGCCGTTGCCACGTTCGTAGTGGAACACAGCATGAGTGTTTGGGTTATCGGATGGGACTCCAGGCTTCTAGCAGCTGCTTACTCTGGGATAGTTTGCTCCGGGATTGCATATTATGTGCAAGGTGTTGTGATGAAGGAACAAGGTCCAGTTTTCGTGACAGCTTTCAGCCCACTGGCCATGATCATCACGGCCGCTCTGGCCGCCATCATTTTAGCTGAGCAAGTGCGCCTCGGAAGCATACTTGGAACTATTCTCATAGTCATCGGCCTCTATGCTGTTGTTTGGGGTAAAAGCAAAGATCCTACGGCCTCTGCCTTATTGATCAAAGACGGGAAAGCTGTTGCTCATGAATTGCCAATCACGGACGACAGTAATAGGTCATCAATCACTGGCGGTAACAACACTAAGGATAGTACTACTATTGGAGCTGCTGGGGACTTCAAGGTTCCAATCAAAGCACAAGAATCGTGA

Protein Analysis

391

Amino Acids

42.02

Weight (kDa)

9.43

Isoelectric Point (pI)

28.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 23 - 160 9e-13 EamA-like transporter family
EamA PF00892 191 - 328 2.1e-08 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 45, 509
AccB1I GGYRCC 2 cut(s) 572, 701
AccBSI CCGCTC 1 cut(s) 896
AciI CCGC 4 cut(s) 543, 894, 903, 1095
AclWI GGATC 2 cut(s) 248, 995
AcoI YGGCCR 3 cut(s) 876, 891, 900
AfaI GTAC 5 cut(s) 158, 299, 485, 624, 1117
AgsI TTSAA 5 cut(s) 124, 209, 412, 503, 1144
AjiI CACGTC 1 cut(s) 480
AjnI CCWGG 1 cut(s) 761
AluBI AGCT 7 cut(s) 643, 658, 776, 863, 917, 1040, 1130
AluI AGCT 7 cut(s) 643, 658, 776, 863, 917, 1040, 1130
Alw21I GWGCWC 1 cut(s) 660
Alw26I GTCTC 1 cut(s) 38
AlwI GGATC 2 cut(s) 248, 995
Ama87I CYCGRG 1 cut(s) 272
AoxI GGCC 7 cut(s) 221, 491, 876, 891, 900, 967, 1008
ApaI GGGCCC 1 cut(s) 495
ApeKI GCWGC 4 cut(s) 418, 773, 776, 1130
AspLEI GCGC 1 cut(s) 930
AspS9I GGNCC 4 cut(s) 491, 492, 606, 845
AsuC2I CCSGG 1 cut(s) 802
AsuHPI GGTGA 4 cut(s) 448, 484, 559, 563
AvaI CYCGRG 1 cut(s) 272
AvaII GGWCC 2 cut(s) 606, 845
BaeGI GKGCMC 1 cut(s) 495
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 2 cut(s) 572, 701
BanII GRGCYC 2 cut(s) 495, 660
Bbv12I GWGCWC 1 cut(s) 660
BbvCI CCTCAGC 1 cut(s) 322
BbvI GCAGC 4 cut(s) 405, 763, 785, 1117
BccI CCATC 4 cut(s) 463, 503, 747, 914
BceAI ACGGC 3 cut(s) 689, 906, 1023
BcgI CGANNNNNNTGC 1 cut(s) 1149
BciT130I CCWGG 1 cut(s) 763
BclI TGATCA 2 cut(s) 882, 1023
BcnI CCSGG 1 cut(s) 802
BcoDI GTCTC 1 cut(s) 38
BfaI CTAG 3 cut(s) 423, 587, 770
BglI GCCNNNNNGGC 1 cut(s) 899
BisI GCNGC 6 cut(s) 419, 774, 777, 894, 903, 1131
BlpI GCTNAGC 1 cut(s) 918
BlsI GCNGC 6 cut(s) 420, 775, 778, 895, 904, 1132
BmcAI AGTACT 1 cut(s) 1117
Bme1390I CCNGG 2 cut(s) 763, 802
Bme18I GGWCC 2 cut(s) 606, 845
BmeT110I CYCGRG 1 cut(s) 272
BmgBI CACGTC 1 cut(s) 480
BmgT120I GGNCC 4 cut(s) 491, 492, 606, 845
BmiI GGNNCC 4 cut(s) 493, 574, 703, 1149
BmrFI CCNGG 2 cut(s) 763, 802
BmsI GCATC 4 cut(s) 141, 344, 554, 570
BpmI CTGGAG 1 cut(s) 745
Bpu10I CCTNAGC 1 cut(s) 322
Bpu1102I GCTNAGC 1 cut(s) 918
BpuMI CCSGG 1 cut(s) 802
BsaAI YACGTR 1 cut(s) 61
BsaJI CCNNGG 1 cut(s) 931
BsaWI WCCGGW 2 cut(s) 548, 608
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bse118I RCCGGY 1 cut(s) 569
Bse1I ACTGG 3 cut(s) 848, 879, 1096
BseBI CCWGG 1 cut(s) 763
BseDI CCNNGG 1 cut(s) 931
BseGI GGATG 2 cut(s) 545, 758
BseMII CTCAG 3 cut(s) 302, 336, 909
BseNI ACTGG 3 cut(s) 848, 879, 1096
BseSI GKGCMC 1 cut(s) 495
BseX3I CGGCCG 1 cut(s) 891
BseXI GCAGC 4 cut(s) 405, 763, 785, 1117
BseYI CCCAGC 2 cut(s) 649, 1133
Bsh1285I CGRYCG 1 cut(s) 894
BshFI GGCC 7 cut(s) 223, 493, 878, 893, 902, 969, 1010
BshNI GGYRCC 2 cut(s) 572, 701
BsiEI CGRYCG 1 cut(s) 894
BsiHKAI GWGCWC 1 cut(s) 660
BsiHKCI CYCGRG 1 cut(s) 272
BsiSI CCGG 4 cut(s) 549, 570, 609, 801
BslFI GGGAC 3 cut(s) 457, 770, 1151
BsmAI GTCTC 1 cut(s) 38
BsmFI GGGAC 3 cut(s) 457, 770, 1151
BsnI GGCC 7 cut(s) 223, 493, 878, 893, 902, 969, 1010
BsoBI CYCGRG 1 cut(s) 272
Bsp120I GGGCCC 1 cut(s) 491
Bsp1286I GDGCHC 2 cut(s) 495, 660
Bsp1407I TGTACA 2 cut(s) 156, 622
Bsp143I GATC 5 cut(s) 240, 438, 882, 1000, 1023
Bsp1720I GCTNAGC 1 cut(s) 918
BspACI CCGC 4 cut(s) 543, 894, 903, 1095
BspANI GGCC 7 cut(s) 223, 493, 878, 893, 902, 969, 1010
BspCNI CTCAG 3 cut(s) 301, 335, 910
BspHI TCATGA 1 cut(s) 1048
BspLI GGNNCC 4 cut(s) 493, 574, 703, 1149
BspPI GGATC 2 cut(s) 248, 995
BspT107I GGYRCC 2 cut(s) 572, 701
BsrBI CCGCTC 1 cut(s) 896
BsrFI RCCGGY 1 cut(s) 569
BsrGI TGTACA 2 cut(s) 156, 622
BsrI ACTGG 3 cut(s) 848, 879, 1096
BssAI RCCGGY 1 cut(s) 569
BssECI CCNNGG 1 cut(s) 931
BssMI GATC 5 cut(s) 240, 438, 882, 1000, 1023
Bst2UI CCWGG 1 cut(s) 763
Bst4CI ACNGT 2 cut(s) 457, 1073
BstAPI GCANNNNNTGC 1 cut(s) 332
BstAUI TGTACA 2 cut(s) 156, 622
BstBAI YACGTR 1 cut(s) 61
BstDEI CTNAG 5 cut(s) 248, 288, 322, 918, 1107
BstEII GGTNACC 1 cut(s) 565
BstF5I GGATG 2 cut(s) 545, 758
BstHHI GCGC 1 cut(s) 930
BstKTI GATC 5 cut(s) 243, 441, 885, 1003, 1026
BstMAI GTCTC 1 cut(s) 38
BstMBI GATC 5 cut(s) 240, 438, 882, 1000, 1023
BstMCI CGRYCG 1 cut(s) 894
BstMWI GCNNNNNNNGC 6 cut(s) 185, 194, 332, 899, 902, 936
BstNI CCWGG 1 cut(s) 763
BstPI GGTNACC 1 cut(s) 565
BstSCI CCNGG 2 cut(s) 761, 800
BstSLI GKGCMC 1 cut(s) 495
BstV1I GCAGC 4 cut(s) 405, 763, 785, 1117
BstX2I RGATCY 2 cut(s) 240, 1000
BstYI RGATCY 2 cut(s) 240, 1000
BstZI CGGCCG 1 cut(s) 891
BsuRI GGCC 7 cut(s) 223, 493, 878, 893, 902, 969, 1010
BtgZI GCGATG 1 cut(s) 482
BtrI CACGTC 1 cut(s) 480
BtsCI GGATG 2 cut(s) 545, 758
BtsI GCAGTG 2 cut(s) 342, 666
BtsIMutI CAGTG 4 cut(s) 342, 666, 872, 1089
CciI TCATGA 1 cut(s) 1048
CfoI GCGC 1 cut(s) 930
Cfr10I RCCGGY 1 cut(s) 569
Cfr13I GGNCC 4 cut(s) 491, 492, 606, 845
Csp6I GTAC 5 cut(s) 157, 298, 484, 623, 1116
CviAII CATG 5 cut(s) 112, 577, 733, 880, 1049
CviQI GTAC 5 cut(s) 157, 298, 484, 623, 1116
DdeI CTNAG 5 cut(s) 248, 288, 322, 918, 1107
DpnI GATC 5 cut(s) 242, 440, 884, 1002, 1025
DpnII GATC 5 cut(s) 240, 438, 882, 1000, 1023
EaeI YGGCCR 3 cut(s) 876, 891, 900
EagI CGGCCG 1 cut(s) 891
Ecl136II GAGCTC 1 cut(s) 658
EclXI CGGCCG 1 cut(s) 891
Eco24I GRGCYC 2 cut(s) 495, 660
Eco47I GGWCC 2 cut(s) 606, 845
Eco52I CGGCCG 1 cut(s) 891
Eco53kI GAGCTC 1 cut(s) 658
Eco88I CYCGRG 1 cut(s) 272
Eco91I GGTNACC 1 cut(s) 565
EcoICRI GAGCTC 1 cut(s) 658
EcoO109I RGGNCCY 1 cut(s) 491
EcoO65I GGTNACC 1 cut(s) 565
EcoRII CCWGG 1 cut(s) 761
EcoT38I GRGCYC 2 cut(s) 495, 660
FaeI CATG 5 cut(s) 115, 580, 736, 883, 1052
FaqI GGGAC 3 cut(s) 457, 770, 1151
FatI CATG 5 cut(s) 111, 576, 732, 879, 1048
FbaI TGATCA 2 cut(s) 882, 1023
Fnu4HI GCNGC 6 cut(s) 419, 774, 777, 894, 903, 1131
FokI GGATG 2 cut(s) 532, 765
FriOI GRGCYC 2 cut(s) 495, 660
Fsp4HI GCNGC 6 cut(s) 419, 774, 777, 894, 903, 1131
FspBI CTAG 3 cut(s) 423, 587, 770
GlaI GCGC 1 cut(s) 929
GluI GCNGC 6 cut(s) 419, 774, 777, 894, 903, 1131
GsaI CCCAGC 2 cut(s) 653, 1137
GsuI CTGGAG 1 cut(s) 745
HaeIII GGCC 7 cut(s) 223, 493, 878, 893, 902, 969, 1010
HapII CCGG 4 cut(s) 549, 570, 609, 801
HhaI GCGC 1 cut(s) 930
Hin1II CATG 5 cut(s) 115, 580, 736, 883, 1052
Hin6I GCGC 1 cut(s) 928
HinP1I GCGC 1 cut(s) 928
HinfI GANTC 4 cut(s) 31, 232, 758, 1166
HpaII CCGG 4 cut(s) 549, 570, 609, 801
HphI GGTGA 4 cut(s) 448, 484, 559, 563
Hpy166II GTNNAC 3 cut(s) 157, 515, 554
Hpy188I TCNGA 3 cut(s) 291, 752, 935
Hpy188III TCNNGA 6 cut(s) 272, 412, 442, 856, 1049, 1170
Hpy8I GTNNAC 3 cut(s) 157, 515, 554
HpyAV CCTTC 3 cut(s) 379, 692, 829
HpyCH4III ACNGT 2 cut(s) 457, 1073
HpyCH4IV ACGT 3 cut(s) 60, 479, 713
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 194, 332, 899, 902, 936
HpyF3I CTNAG 5 cut(s) 248, 288, 322, 918, 1107
HpySE526I ACGT 3 cut(s) 60, 479, 713
Hsp92II CATG 5 cut(s) 115, 580, 736, 883, 1052
HspAI GCGC 1 cut(s) 928
Ksp22I TGATCA 2 cut(s) 882, 1023
Kzo9I GATC 5 cut(s) 240, 438, 882, 1000, 1023
LmnI GCTCC 4 cut(s) 464, 588, 803, 1127
Lsp1109I GCAGC 4 cut(s) 405, 763, 785, 1117
LweI GCATC 4 cut(s) 141, 344, 554, 570
MaeI CTAG 3 cut(s) 423, 587, 770
MaeII ACGT 3 cut(s) 60, 479, 713
MaeIII GTNAC 3 cut(s) 565, 856, 1097
MalI GATC 5 cut(s) 242, 440, 884, 1002, 1025
MbiI CCGCTC 1 cut(s) 896
MboI GATC 5 cut(s) 240, 438, 882, 1000, 1023
MboII GAAGA 2 cut(s) 235, 607
MflI RGATCY 2 cut(s) 240, 1000
MhlI GDGCHC 2 cut(s) 495, 660
MlsI TGGCCA 1 cut(s) 878
MluCI AATT 5 cut(s) 12, 26, 80, 406, 1052
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 3 cut(s) 40, 226, 752
MnlI CCTC 6 cut(s) 331, 365, 408, 941, 980, 1021
Mox20I TGGCCA 1 cut(s) 878
MscI TGGCCA 1 cut(s) 878
MseI TTAA 1 cut(s) 683
MslI CAYNNNNRTG 1 cut(s) 578
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 4 cut(s) 549, 570, 609, 801
MspR9I CCNGG 2 cut(s) 763, 802
MvaI CCWGG 1 cut(s) 763
MwoI GCNNNNNNNGC 6 cut(s) 185, 194, 332, 899, 902, 936
NciI CCSGG 1 cut(s) 802
NdeII GATC 5 cut(s) 240, 438, 882, 1000, 1023
NlaIII CATG 5 cut(s) 115, 580, 736, 883, 1052
NlaIV GGNNCC 4 cut(s) 493, 574, 703, 1149
NmeAIII GCCGAG 1 cut(s) 679
NmuCI GTSAC 2 cut(s) 565, 856
PaeR7I CTCGAG 1 cut(s) 272
PagI TCATGA 1 cut(s) 1048
PfeI GAWTC 1 cut(s) 1166
PfoI TCCNGGA 1 cut(s) 800
PkrI GCNGC 6 cut(s) 420, 775, 778, 895, 904, 1132
PleI GAGTC 3 cut(s) 39, 226, 752
PpsI GAGTC 3 cut(s) 39, 226, 752
Ppu21I YACGTR 1 cut(s) 61
PsiI TTATAA 2 cut(s) 45, 509
Psp124BI GAGCTC 1 cut(s) 660
Psp6I CCWGG 1 cut(s) 761
PspEI GGTNACC 1 cut(s) 565
PspFI CCCAGC 2 cut(s) 649, 1133
PspGI CCWGG 1 cut(s) 761
PspN4I GGNNCC 4 cut(s) 493, 574, 703, 1149
PspOMI GGGCCC 1 cut(s) 491
PspPI GGNCC 4 cut(s) 491, 492, 606, 845
PsuI RGATCY 2 cut(s) 240, 1000
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 5 cut(s) 158, 299, 485, 624, 1117
RsaNI GTAC 5 cut(s) 157, 298, 484, 623, 1116
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 1 cut(s) 660
SaqAI TTAA 1 cut(s) 683
SatI GCNGC 6 cut(s) 419, 774, 777, 894, 903, 1131
Sau3AI GATC 5 cut(s) 240, 438, 882, 1000, 1023
Sau96I GGNCC 4 cut(s) 491, 492, 606, 845
ScaI AGTACT 1 cut(s) 1117
SchI GAGTC 3 cut(s) 40, 226, 752
ScrFI CCNGG 2 cut(s) 763, 802
SduI GDGCHC 2 cut(s) 495, 660
SfaNI GCATC 4 cut(s) 141, 344, 554, 570
SfiI GGCCNNNNNGGCC 1 cut(s) 899
Sfr274I CTCGAG 1 cut(s) 272
SinI GGWCC 2 cut(s) 606, 845
SlaI CTCGAG 1 cut(s) 272
SmiMI CAYNNNNRTG 1 cut(s) 578
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
Sse9I AATT 5 cut(s) 12, 26, 80, 406, 1052
SsiI CCGC 4 cut(s) 543, 894, 903, 1095
SspMI CTAG 3 cut(s) 423, 587, 770
SstI GAGCTC 1 cut(s) 660
StyD4I CCNGG 2 cut(s) 761, 800
TaaI ACNGT 2 cut(s) 457, 1073
TaiI ACGT 3 cut(s) 63, 482, 716
TaqI TCGA 1 cut(s) 273
TasI AATT 5 cut(s) 12, 26, 80, 406, 1052
TatI WGTACW 4 cut(s) 156, 297, 622, 1115
TauI GCSGC 2 cut(s) 896, 905
TfiI GAWTC 1 cut(s) 1166
Tru1I TTAA 1 cut(s) 683
Tru9I TTAA 1 cut(s) 683
TscAI CASTG 4 cut(s) 349, 673, 879, 1096
TseFI GTSAC 2 cut(s) 565, 856
TseI GCWGC 4 cut(s) 418, 773, 776, 1130
Tsp45I GTSAC 2 cut(s) 565, 856
TspDTI ATGAA 4 cut(s) 361, 607, 848, 1065
TspGWI ACGGA 1 cut(s) 1079
TspRI CASTG 4 cut(s) 349, 673, 879, 1096
VpaK11BI GGWCC 2 cut(s) 606, 845
XcmI CCANNNNNNNNNTGG 2 cut(s) 17, 718
XhoI CTCGAG 1 cut(s) 272
XspI CTAG 3 cut(s) 423, 587, 770
ZrmI AGTACT 1 cut(s) 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.