pycom15g31510

WAT1-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
29980106 .. 29985036
4931 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g31510.5

Sequence Viewer

Length: 1122 bp
ATGGGAGAGTCGAAGTTGAGTTTATTTCTCATCAAGATCAAGCCTTACTTGGCTATGGTCTCTCTTCAGTTTGGATATTCAGGCATGTACATCATTAGCATGGTCTCGTTTAAACATGGCATGAGTCACTTCGTTCTCTCGGTTTATCGTCACGTTGTTGCCTTCTGTGTCATCGCACCCTTTGCCTTTGTTCTTGAAAGGAAAATAAGACCGAGAATGACACTCCCGATATTCCTCCGAATAGTTATGCTTGGTTTTCTTGAGCCAGTTCTTGATCAAAACTTATACTTTTTGGGAATGAAGTACACCTCAGCGACATTTGCATCTGCTGTTGTCAACGTCCTTCCGGCCATTACCTTCGTAATGGCACTTTGTTTCAGGCTAGAGACTGTGAACGTTAAGAAGCTACATAGCCTGGCGAAGGTGATTGGAACAGTGATCACAGTGGGAGGAGCAATGATCATGACATTATACAAAGGCCCCATTGTGGATATCATACGAGGACACTCACACAGTCACAACAGCAGCACCACCGAATCCAGCGAACAGCATTGGATCGCTGGCCCCTTAATGCTCTTAGGCAGCTGCGGTGGTTGGGCAAGTTTCTTCATTCTTCAATCATTTACGTTGAAGAAGTACCCGGCAGAGCTCTCTCTCACGGCTTGGATATGCTTGATGGGTATGTTGGAAGGTGGAGTAATAACATTTGCAGTGGAACGCAAATTGAGTGTCTGGGTTATAGGCTGGGACTCAAGGCTCCTTGCTTCCGTTTACTCTGGAGTGGTTTGTTCTGGGATGGCATATTATGTGCAAGGAGTTGTCATTAGGGAACGAGGCCCCGTTTTTGTGACCGCTTTCAGTCCCCTCTGCATGATCATCACCGCCGCTCTAGGGGCTATCGTTTTAGCTGAGCAAGTCCACCTCGGAAGTATAATTGGAGCCATTTGCATAGTGTTCGGCCTCTACACTGTGGTCTGGGGCAAAAGCAAGGACCCTCTAGCATCAAGCGCGCCGTTGAAAGATGAGAATACTCGTAACCTTGAGTTGCCAGTGAGTGCCGATCATCACAATAGCATAAATCGATCGTACCTGATCACAAGATTTCATTCCCAAGATTCCTAA

Protein Analysis

374

Amino Acids

41.09

Weight (kDa)

9.26

Isoelectric Point (pI)

29.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 887
AccII CGCG 1 cut(s) 1010
AciI CCGC 4 cut(s) 588, 852, 882, 885
AclI AACGTT 1 cut(s) 396
AclWI GGATC 1 cut(s) 563
AcoI YGGCCR 1 cut(s) 348
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 4 cut(s) 89, 305, 638, 1088
AfiI CCNNNNNNNGG 3 cut(s) 421, 487, 891
AgsI TTSAA 4 cut(s) 197, 617, 631, 1018
AjnI CCWGG 1 cut(s) 414
AluBI AGCT 4 cut(s) 406, 585, 649, 908
AluI AGCT 4 cut(s) 406, 585, 649, 908
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 3 cut(s) 64, 109, 380
AlwI GGATC 1 cut(s) 563
AoxI GGCC 5 cut(s) 348, 478, 562, 835, 958
ApeKI GCWGC 3 cut(s) 525, 582, 585
ArsI GACNNNNNNTTYG 2 cut(s) 714, 746
AspLEI GCGC 2 cut(s) 1010, 1012
AspS9I GGNCC 4 cut(s) 479, 563, 836, 991
AsuC2I CCSGG 1 cut(s) 641
AsuHPI GGTGA 2 cut(s) 436, 871
AvaII GGWCC 1 cut(s) 991
BanII GRGCYC 1 cut(s) 651
Bbv12I GWGCWC 1 cut(s) 651
BbvCI CCTCAGC 1 cut(s) 310
BbvI GCAGC 3 cut(s) 537, 572, 594
BccI CCATC 2 cut(s) 670, 790
BceAI ACGGC 2 cut(s) 675, 997
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 1 cut(s) 416
BclI TGATCA 5 cut(s) 274, 438, 459, 873, 1092
BcnI CCSGG 1 cut(s) 641
BcoDI GTCTC 3 cut(s) 64, 109, 380
BfaI CTAG 3 cut(s) 383, 890, 998
BisI GCNGC 4 cut(s) 526, 583, 586, 885
BlpI GCTNAGC 1 cut(s) 909
BlsI GCNGC 4 cut(s) 527, 584, 587, 886
Bme1390I CCNGG 2 cut(s) 416, 641
Bme18I GGWCC 1 cut(s) 991
BmgT120I GGNCC 4 cut(s) 479, 563, 836, 991
BmiI GGNNCC 6 cut(s) 481, 565, 758, 838, 940, 993
BmrFI CCNGG 2 cut(s) 416, 641
BmsI GCATC 2 cut(s) 332, 1010
BpmI CTGGAG 1 cut(s) 798
Bpu10I CCTNAGC 1 cut(s) 310
Bpu1102I GCTNAGC 1 cut(s) 909
BpuEI CTTGAG 3 cut(s) 281, 736, 1061
BpuMI CCSGG 1 cut(s) 641
Bsa29I ATCGAT 1 cut(s) 1081
BsaI GGTCTC 2 cut(s) 64, 109
BsaJI CCNNGG 1 cut(s) 922
Bsc4I CCNNNNNNNGG 3 cut(s) 421, 487, 891
Bse1I ACTGG 2 cut(s) 266, 1049
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 1 cut(s) 416
BseCI ATCGAT 1 cut(s) 1081
BseDI CCNNGG 1 cut(s) 922
BseGI GGATG 1 cut(s) 801
BseLI CCNNNNNNNGG 3 cut(s) 421, 487, 891
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 2 cut(s) 324, 900
BseNI ACTGG 2 cut(s) 266, 1049
BsePI GCGCGC 1 cut(s) 1008
BseRI GAGGAG 1 cut(s) 465
BseXI GCAGC 3 cut(s) 537, 572, 594
BseYI CCCAGC 1 cut(s) 744
Bsh1236I CGCG 1 cut(s) 1010
Bsh1285I CGRYCG 1 cut(s) 1085
BshFI GGCC 5 cut(s) 350, 480, 564, 837, 960
BshVI ATCGAT 1 cut(s) 1081
BsiEI CGRYCG 1 cut(s) 1085
BsiHKAI GWGCWC 1 cut(s) 651
BsiSI CCGG 2 cut(s) 347, 641
BslFI GGGAC 2 cut(s) 761, 846
BslI CCNNNNNNNGG 3 cut(s) 421, 487, 891
BsmAI GTCTC 3 cut(s) 64, 109, 380
BsmFI GGGAC 2 cut(s) 761, 846
BsnI GGCC 5 cut(s) 350, 480, 564, 837, 960
Bso31I GGTCTC 2 cut(s) 64, 109
Bsp1286I GDGCHC 1 cut(s) 651
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
Bsp1720I GCTNAGC 1 cut(s) 909
BspACI CCGC 4 cut(s) 588, 852, 882, 885
BspANI GGCC 5 cut(s) 350, 480, 564, 837, 960
BspCNI CTCAG 2 cut(s) 323, 901
BspDI ATCGAT 1 cut(s) 1081
BspFNI CGCG 1 cut(s) 1010
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 6 cut(s) 481, 565, 758, 838, 940, 993
BspPI GGATC 1 cut(s) 563
BspTNI GGTCTC 2 cut(s) 64, 109
BsrBI CCGCTC 1 cut(s) 887
BsrDI GCAATG 1 cut(s) 462
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 2 cut(s) 266, 1049
BssECI CCNNGG 1 cut(s) 922
BssHII GCGCGC 1 cut(s) 1008
BssMI GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
Bst2UI CCWGG 1 cut(s) 416
Bst4CI ACNGT 5 cut(s) 391, 436, 445, 515, 970
Bst6I CTCTTC 1 cut(s) 69
BstAPI GCANNNNNTGC 1 cut(s) 182
BstAUI TGTACA 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 562, 1010
BstDEI CTNAG 3 cut(s) 310, 577, 909
BstENI CCTNNNNNAGG 1 cut(s) 419
BstF5I GGATG 1 cut(s) 801
BstFNI CGCG 1 cut(s) 1010
BstHHI GCGC 2 cut(s) 1010, 1012
BstKTI GATC 9 cut(s) 39, 277, 441, 462, 558, 876, 1063, 1085, 1095
BstMAI GTCTC 3 cut(s) 64, 109, 380
BstMBI GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
BstMCI CGRYCG 1 cut(s) 1085
BstMWI GCNNNNNNNGC 4 cut(s) 182, 320, 893, 1007
BstNI CCWGG 1 cut(s) 416
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 2 cut(s) 414, 639
BstUI CGCG 1 cut(s) 1010
BstV1I GCAGC 3 cut(s) 537, 572, 594
Bsu15I ATCGAT 1 cut(s) 1081
BsuRI GGCC 5 cut(s) 350, 480, 564, 837, 960
BsuTUI ATCGAT 1 cut(s) 1081
BtgZI GCGATG 1 cut(s) 157
BtsCI GGATG 1 cut(s) 801
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 5 cut(s) 441, 450, 717, 966, 1056
Cac8I GCNNGC 2 cut(s) 562, 1010
CciI TCATGA 1 cut(s) 462
CfoI GCGC 2 cut(s) 1010, 1012
Cfr13I GGNCC 4 cut(s) 479, 563, 836, 991
ClaI ATCGAT 1 cut(s) 1081
Csp6I GTAC 4 cut(s) 88, 304, 637, 1087
CviAII CATG 6 cut(s) 85, 100, 116, 121, 463, 871
CviQI GTAC 4 cut(s) 88, 304, 637, 1087
DdeI CTNAG 3 cut(s) 310, 577, 909
DpnI GATC 9 cut(s) 38, 276, 440, 461, 557, 875, 1062, 1084, 1094
DpnII GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
DraI TTTAAA 1 cut(s) 112
EaeI YGGCCR 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Ecl136II GAGCTC 1 cut(s) 649
Eco24I GRGCYC 1 cut(s) 651
Eco31I GGTCTC 2 cut(s) 64, 109
Eco32I GATATC 1 cut(s) 493
Eco47I GGWCC 1 cut(s) 991
Eco53kI GAGCTC 1 cut(s) 649
Eco57I CTGAAG 1 cut(s) 50
EcoICRI GAGCTC 1 cut(s) 649
EcoNI CCTNNNNNAGG 1 cut(s) 419
EcoO109I RGGNCCY 3 cut(s) 479, 836, 991
EcoRII CCWGG 1 cut(s) 414
EcoRV GATATC 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 651
FaeI CATG 6 cut(s) 88, 103, 119, 124, 466, 874
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FaqI GGGAC 2 cut(s) 761, 846
FatI CATG 6 cut(s) 84, 99, 115, 120, 462, 870
FbaI TGATCA 5 cut(s) 274, 438, 459, 873, 1092
Fnu4HI GCNGC 4 cut(s) 526, 583, 586, 885
FokI GGATG 1 cut(s) 808
FriOI GRGCYC 1 cut(s) 651
Fsp4HI GCNGC 4 cut(s) 526, 583, 586, 885
FspBI CTAG 3 cut(s) 383, 890, 998
GlaI GCGC 2 cut(s) 1009, 1011
GluI GCNGC 4 cut(s) 526, 583, 586, 885
GsaI CCCAGC 1 cut(s) 748
GsuI CTGGAG 1 cut(s) 798
HaeIII GGCC 5 cut(s) 350, 480, 564, 837, 960
HapII CCGG 2 cut(s) 347, 641
HhaI GCGC 2 cut(s) 1010, 1012
Hin1II CATG 6 cut(s) 88, 103, 119, 124, 466, 874
Hin6I GCGC 2 cut(s) 1008, 1010
HinP1I GCGC 2 cut(s) 1008, 1010
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HinfI GANTC 5 cut(s) 8, 124, 536, 749, 1115
HpaII CCGG 2 cut(s) 347, 641
HphI GGTGA 2 cut(s) 436, 871
Hpy166II GTNNAC 5 cut(s) 306, 337, 394, 772, 919
Hpy188I TCNGA 2 cut(s) 239, 926
Hpy188III TCNNGA 7 cut(s) 34, 194, 226, 260, 272, 463, 777
Hpy8I GTNNAC 5 cut(s) 306, 337, 394, 772, 919
HpyAV CCTTC 5 cut(s) 172, 353, 367, 415, 683
HpyCH4III ACNGT 5 cut(s) 391, 436, 445, 515, 970
HpyCH4IV ACGT 4 cut(s) 153, 339, 396, 626
HpyCH4V TGCA 5 cut(s) 323, 710, 811, 870, 948
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 320, 893, 1007
HpyF3I CTNAG 3 cut(s) 310, 577, 909
HpySE526I ACGT 4 cut(s) 153, 339, 396, 626
Hsp92II CATG 6 cut(s) 88, 103, 119, 124, 466, 874
HspAI GCGC 2 cut(s) 1008, 1010
Ksp22I TGATCA 5 cut(s) 274, 438, 459, 873, 1092
Kzo9I GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
LmnI GCTCC 3 cut(s) 452, 762, 938
Lsp1109I GCAGC 3 cut(s) 537, 572, 594
LweI GCATC 2 cut(s) 332, 1010
MaeI CTAG 3 cut(s) 383, 890, 998
MaeII ACGT 4 cut(s) 153, 339, 396, 626
MaeIII GTNAC 5 cut(s) 125, 149, 515, 847, 1034
MalI GATC 9 cut(s) 38, 276, 440, 461, 557, 875, 1062, 1084, 1094
MbiI CCGCTC 1 cut(s) 887
MboI GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
MboII GAAGA 4 cut(s) 56, 598, 605, 643
MhlI GDGCHC 1 cut(s) 651
MluCI AATT 2 cut(s) 722, 933
MlyI GAGTC 3 cut(s) 17, 133, 743
MmeI TCCRAC 1 cut(s) 666
MnlI CCTC 9 cut(s) 245, 319, 443, 494, 827, 875, 932, 971, 1005
MseI TTAA 3 cut(s) 111, 399, 569
MslI CAYNNNNRTG 1 cut(s) 98
MspA1I CMGCKG 1 cut(s) 585
MspI CCGG 2 cut(s) 347, 641
MspR9I CCNGG 2 cut(s) 416, 641
MssI GTTTAAAC 1 cut(s) 112
MvaI CCWGG 1 cut(s) 416
MvnI CGCG 1 cut(s) 1010
MwoI GCNNNNNNNGC 4 cut(s) 182, 320, 893, 1007
NciI CCSGG 1 cut(s) 641
NdeII GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
NlaIII CATG 6 cut(s) 88, 103, 119, 124, 466, 874
NlaIV GGNNCC 6 cut(s) 481, 565, 758, 838, 940, 993
NmuCI GTSAC 4 cut(s) 125, 149, 515, 847
NspI RCATGY 1 cut(s) 88
PagI TCATGA 1 cut(s) 462
PauI GCGCGC 1 cut(s) 1008
PfeI GAWTC 2 cut(s) 536, 1115
PkrI GCNGC 4 cut(s) 527, 584, 587, 886
Ple19I CGATCG 1 cut(s) 1085
PleI GAGTC 3 cut(s) 16, 132, 743
PmeI GTTTAAAC 1 cut(s) 112
PpsI GAGTC 3 cut(s) 16, 132, 743
PpuMI RGGWCCY 1 cut(s) 991
Psp124BI GAGCTC 1 cut(s) 651
Psp1406I AACGTT 1 cut(s) 396
Psp5II RGGWCCY 1 cut(s) 991
Psp6I CCWGG 1 cut(s) 414
PspFI CCCAGC 1 cut(s) 744
PspGI CCWGG 1 cut(s) 414
PspN4I GGNNCC 6 cut(s) 481, 565, 758, 838, 940, 993
PspPI GGNCC 4 cut(s) 479, 563, 836, 991
PspPPI RGGWCCY 1 cut(s) 991
PteI GCGCGC 1 cut(s) 1008
PvuI CGATCG 1 cut(s) 1085
PvuII CAGCTG 1 cut(s) 585
RsaI GTAC 4 cut(s) 89, 305, 638, 1088
RsaNI GTAC 4 cut(s) 88, 304, 637, 1087
RseI CAYNNNNRTG 1 cut(s) 98
SacI GAGCTC 1 cut(s) 651
SaqAI TTAA 3 cut(s) 111, 399, 569
SatI GCNGC 4 cut(s) 526, 583, 586, 885
Sau3AI GATC 9 cut(s) 36, 274, 438, 459, 555, 873, 1060, 1082, 1092
Sau96I GGNCC 4 cut(s) 479, 563, 836, 991
SchI GAGTC 3 cut(s) 17, 133, 743
ScrFI CCNGG 2 cut(s) 416, 641
SduI GDGCHC 1 cut(s) 651
SfaNI GCATC 2 cut(s) 332, 1010
SinI GGWCC 1 cut(s) 991
SmiMI CAYNNNNRTG 1 cut(s) 98
SmlI CTYRAG 3 cut(s) 260, 751, 1040
SmoI CTYRAG 3 cut(s) 260, 751, 1040
Sse9I AATT 2 cut(s) 722, 933
SsiI CCGC 4 cut(s) 588, 852, 882, 885
SspMI CTAG 3 cut(s) 383, 890, 998
SstI GAGCTC 1 cut(s) 651
StyD4I CCNGG 2 cut(s) 414, 639
TaaI ACNGT 5 cut(s) 391, 436, 445, 515, 970
TaiI ACGT 4 cut(s) 156, 342, 399, 629
TaqI TCGA 2 cut(s) 11, 1081
TaqII GACCGA 1 cut(s) 226
TasI AATT 2 cut(s) 722, 933
TatI WGTACW 2 cut(s) 87, 303
TauI GCSGC 1 cut(s) 887
TfiI GAWTC 2 cut(s) 536, 1115
Tru1I TTAA 3 cut(s) 111, 399, 569
Tru9I TTAA 3 cut(s) 111, 399, 569
TscAI CASTG 5 cut(s) 441, 450, 717, 973, 1056
TseFI GTSAC 4 cut(s) 125, 149, 515, 847
TseI GCWGC 3 cut(s) 525, 582, 585
Tsp45I GTSAC 4 cut(s) 125, 149, 515, 847
TspDTI ATGAA 3 cut(s) 314, 598, 1094
TspGWI ACGGA 1 cut(s) 757
TspRI CASTG 5 cut(s) 441, 450, 717, 973, 1056
VpaK11BI GGWCC 1 cut(s) 991
XagI CCTNNNNNAGG 1 cut(s) 419
XceI RCATGY 1 cut(s) 88
XspI CTAG 3 cut(s) 383, 890, 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.