Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Forward (+)

11188120 .. 11192585

Gene Structure 4466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G31290.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3585 bp

ATGGATCGAGGTGGTTACCGAGGAGGTCGTGGTGATGGCCGTGGCAGAGGCGGCGGCGGAGATCGTGGTCGTGGTTACAGCGGTCGTGGTGATGGCCGTGGCAGAGGCGGCGACGGAGATCGTGGTTACAGCGGTCGTGGTGATGGCCATGGCAGAGGCGGCGGCGGAGATCGTGGTCGTGGTTACAGCGGTCGTGGTGATGGCCGTGGCAGAGGCGGCGGCGGAGATCGTGGTCGTGGTTACAGCGGTCGTGGTGATGGCCATGGCAGAGGCGGCGGCGGAGATCGTGGTCGTGGTTACAGCGGTCGTGGTCGTGGCTTTGTTCAAGATAGGGATGGTGGTTGGGTAAATCCAGGGCAAAGTTCAGGTGGTCATGTTCGTGGTCGTGGGACGCAGTTGCAACAACCTCCGCCACAGGAAGTTCCTCCGTCGTCGTCGCAAGCTCAAGTGAGTCAAGGCGTTGCACCAGGAGACGTGGGTCAAGGCGGCGTCGGAGACGTGGGTAGAGACGGCGTCGGAGACGTGGGTAGAGACGGCGTCGGAGACGTGGGTCAAGGTGGCGTCGGAGACGTGGGTCAAGTAGGCGTCGGAGACGTGGGTCAAGGCGGCGTCGGAGACGTGGGTCAAGGCGGCGTCGGAGACGTGGGTAGAGACGGCGTCGGAGACGTGGGTAGAGACGGCGTCGGAGACGTGGGTAGAGGCGGCGTCGGAGACCGTGGACAGAGTCAGTCGGGACTATCGTCGGGTCACTTTGGTCGTGGGACGCAGTTGCAACAACCTCAGCCACAGGCGGTTTCTCAGTCGTCTTCGCAGGGTCAAGTGAGTCAATCCTTTGCAACAGGAGGCGTGGGTTTAGGCGCGTGGGCTCGTAAGCCTCAACTTTTCTCTGATTCGACGGTCTTACCTTCTAGTTCTTCGTCTAACGTCGTTGCTTCTCACACCGCTAGTGGTTCTCAAGTTATGACTCCGAAACCATCTTCTTCTGATAAGAAAGAACCAGTAAAGCGTCCTGATAAAGGTGGTAATATAAAAGTGAAAGGCGTAATTAATCTCTCCGTCAATCATTTTAGAGTGAGTTTCTCAACAGAAAGTGTCATAAGGCACTACGATGTTGATATCAAAGGAGAAAATTCTTCAAAAAAGATATCAAGATTTGAGCTAGCTATGGTCAAAGAAAAGCTGTTCAAGGACAATAATGACTTTCCTAACGCCATGACAGCGTACGATGGTCAGAAGAACATTTTCAGCGCTGTTGAATTACCTACGGGATCATTTAAAGTTGATTTCTCAGAAACCGAGGAGATCATGAGAGGTAGAAGCTATACGTTCATCATCAAACAAGTGAAAGAGCTAAAGTTACTTGACTTGCAAGCCTACATAGATGGACGTTCCACTTTTATTCCGCGTGATGTGTTGCAAGGAATGGATGTTGTGATGAAGGAACATCCTTCAAAACGTATGATCACTGTTGGTAAAAGATTCTTTAGTACTCGGCTAGAGATTGACTTTGGATACGGAGTTGGAGCTGCGAAAGGGTTTCACCACACTCTCAAGCCCACAGTACAAGGTTTATCATTATGTTTGAACTCCTCTTTGTTGGCGTTCCGCAAAGCAATTTCAGTCATCGAATACCTGAAGTTGTACTTTGGGTGGAGAAATATACGTCAGTTTAAGAATTGTAGGCCTGATGACGTGGTACAAGAATTGATTGGTTTGAAAGTCACTGTTGATCATCGAAAGACCAAACAGAAATTCATCATTATGGGGTTGAGTAAGGACGACACAAAAGATATCAAATTCGATTTTATTGATCATGCTGGAAACCAGCCTCCAAGGAAAATATCCATTGTTGAGTATTTCAAGGAAAAGTATGGAAGAGACATTGATCACAAGGATATTCCTTGCTTGAATTTGGGGAAAAAGGGTCGGGAAAATTTTGTACCCATGGAGTTCTGTAACTTAGTCGAGGGGCAGATTTTTCCAAAAGAGAAATTGTATAGAGATTCAGCCGCGTGGTTAAAGGAGCTTTCACTAGTCACTCCACAACAAAGACTGGAGAATATAAATAAGATGATAAAGTCTAGTGATGGACCTAGAGGTGGAGATATCATTGGAAACTTCGGATTGAGAGTGGATCCAAACATGACAACGGTGGAAGGTCGTGTACTCGAGGCTCCTACACTGAAATTGACTGATCGGAGAGGCAATCCTATCCATGAGAAACTCATGAGCGAGAGCAATCAATGGAACCTTACGACAAAGGGAGTCACAAAGGGTTCAATAATCAAGCATTGGGCTGTTCTTGACTTCACTGCATCCGAGAGTTTGAAAAAAAAGATGCCTGGTTACTTTGTAAATAAACTCATCGAACGTTGTAAGGGACTTGGGATGCAGATGGAGGCTCCTATCGTTTGCAAAACATCGAGTATGGAAACACTTTATGATGGTAATGCTCTTGAGGAATTGCTTCGATCCGTGATAGATGAGGCTTCTCATAACCATGGTGGGGCTTGTCCAACTCTTGTTCTGTGTGCTATGACTGGGAAGCACGATGGATACAAGACTCTGAAATGGATAGCCGAGACCAAACTTGGTCTAGTGACTCAGTGTTTCTTGACCATATCTGCCATTAAAGGAGAAACCGTTTCTGATCAGTACTTGGCAAATCTCGCCCTCAAGATAAACGCAAAGGTTGGTGGAACGAACGTGGAGTTGGTGGATAATATTTTCTCTTTCTTCAAAAAAGAAGATAAGGTCATGTTCATTGGTGCTGATGTCAATCATCCCGCTGCTCACGACAATATGAGTCCATCCATTGTTGCTGTTGTAGGCACTCTTAACTGGCCTGAAGCTAACCGCTACGCAGCTAGAGTCAAAGCTCAGAGTCACCGTAAAGAAGAGATACAAGGGTTTGGTGAAACTTGCTGGGAGCTTATCGAAGCTCATTCTCAGGCCCCCGAGAAACGACCTAACAAGATTGTGATATTCCGTGATGGTGTCAGCGATGGTCAGTTCGATATGGTTCTCAATGTGGAGTTACAGAATGTTAAGGACGTTTTTGCCAAGGTTGGCTATAATCCGCAGATAACTGTAATTGTGGCACAGAAACGTCATCAAACCCGTTTCTTCCCCGCCACAACTAGCAAAGATGGAAGGGCTAAGGGCAATGTGCCTTCAGGTACGGTCGTTGATACCACGATCATTCACCCGTTTGAGTATGATTTCTACCTCTGTAGTCAACATGGAGCGATAGGTACAAGCAAACCAACTCATTATTATGTTCTTTCGGACGAAATCGGGTTCAACTCGAATCAGATTCAGAAACTCATCTTTGACTTGTGCTTCACGTTTACTCGCTGCACCAAACCGGTCGCTCTGGTTCCTCCGGTTTCTTATGCTGACAAGGCTGCTTCTAGAGGAAGGGTGTACTACGAGGCAAGCTTAATGAAGAAGAATTCTAAGCAGTCGCGTGGAGCGTCTTCGTCTTCTGCCTCGGTTGCCTCTTCATCCTCTTCTGTCACAATGGAGGACAAAGAGATCTTCAAGGTTCACGCAGGCATCGAGAACTTTATGTTCTTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1194

Amino Acids

129.18

Weight (kDa)

9.33

Isoelectric Point (pI)

30.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	275 - 405	1.2e-25	N-terminal domain of argonaute
ArgoL1	PF08699	416 - 463	2.5e-08	Argonaute linker 1 domain
PAZ	PF02170	469 - 591	4e-25	PAZ domain
ArgoL2	PF16488	609 - 655	3e-10	Argonaute linker 2 domain
Piwi	PF02171	768 - 1070	3.2e-86	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	4 cut(s)	860, 1405, 2012, 3469
AclI	AACGTT	1 cut(s)	2371
AclWI	GGATC	5 cut(s)	12, 1276, 2129, 2142, 2466
AcoI	YGGCCR	5 cut(s)	37, 94, 145, 202, 259
AcsI	RAATTY	6 cut(s)	1129, 1751, 1796, 1909, 1933, 3454
AcuI	CTGAAG	3 cut(s)	1655, 2868, 3159
AfeI	AGCGCT	1 cut(s)	1249
AfiI	CCNNNNNNNGG	3 cut(s)	1016, 2099, 2506
AgeI	ACCGGT	1 cut(s)	3367
AhlI	ACTAGT	1 cut(s)	2032
AjnI	CCWGG	3 cut(s)	352, 466, 2341
AjuI	GAANNNNNNNTTGG	4 cut(s)	1736, 1768, 2696, 2728
AlwI	GGATC	5 cut(s)	12, 1276, 2129, 2142, 2466
Ama87I	CYCGRG	2 cut(s)	2168, 2957
Aor51HI	AGCGCT	1 cut(s)	1249
AoxI	GGCC	8 cut(s)	37, 94, 145, 202, 259, 1682, 2843, 2952
ApeKI	GCWGC	5 cut(s)	1526, 2789, 2864, 3357, 3407
ApoI	RAATTY	6 cut(s)	1129, 1751, 1796, 1909, 1933, 3454
AseI	ATTAAT	1 cut(s)	1047
AsiGI	ACCGGT	1 cut(s)	3367
Asp700I	GAANNNNTTC	2 cut(s)	1241, 2466
AspLEI	GCGC	2 cut(s)	860, 1250
AspS9I	GGNCC	2 cut(s)	2090, 2953
AsuHPI	GGTGA	9 cut(s)	44, 101, 152, 209, 266, 1532, 2879, 2927, 3197
AsuNHI	GCTAGC	1 cut(s)	1159
AvaI	CYCGRG	2 cut(s)	2168, 2957
AvaII	GGWCC	1 cut(s)	2090
BaeI	ACNNNNGTAYC	4 cut(s)	2894, 2927, 3171, 3204
BalI	TGGCCA	2 cut(s)	147, 261
BamHI	GGATCC	1 cut(s)	2134
BanII	GRGCYC	1 cut(s)	868
BarI	GAAGNNNNNNTAC	2 cut(s)	2148, 2180
BbsI	GAAGAC	3 cut(s)	798, 3471, 3477
BbvCI	CCTCAGC	1 cut(s)	780
BbvI	GCAGC	5 cut(s)	1513, 2776, 2876, 3344, 3394
BceAI	ACGGC	7 cut(s)	24, 81, 189, 526, 550, 670, 694
BciT130I	CCWGG	3 cut(s)	354, 468, 2343
BciVI	GTATCC	2 cut(s)	1505, 2549
BclI	TGATCA	5 cut(s)	1461, 1729, 1810, 1885, 2650
BcuI	ACTAGT	1 cut(s)	2032
BfmI	CTRYAG	1 cut(s)	3232
BfoI	RGCGCY	1 cut(s)	1251
BfuI	GTATCC	2 cut(s)	1505, 2549
BglII	AGATCT	1 cut(s)	3537
BmcAI	AGTACT	2 cut(s)	1489, 2657
Bme1390I	CCNGG	3 cut(s)	354, 468, 2343
Bme18I	GGWCC	1 cut(s)	2090
BmeT110I	CYCGRG	2 cut(s)	2168, 2957
BmgT120I	GGNCC	2 cut(s)	2090, 2953
BmiI	GGNNCC	6 cut(s)	2136, 2175, 2249, 2403, 2955, 3381
BmrFI	CCNGG	3 cut(s)	354, 468, 2343
BmrI	ACTGGG	1 cut(s)	2550
BmsI	GCATC	4 cut(s)	2324, 2328, 2379, 3567
BmtI	GCTAGC	1 cut(s)	1163
BmuI	ACTGGG	1 cut(s)	2550
BoxI	GACNNNNGTC	6 cut(s)	477, 549, 573, 597, 621, 739
BpiI	GAAGAC	3 cut(s)	798, 3471, 3477
BpmI	CTGGAG	1 cut(s)	2075
Bpu10I	CCTNAGC	2 cut(s)	780, 3159
BpuEI	CTTGAG	5 cut(s)	429, 939, 1535, 2477, 2660
BsaBI	GATNNNNATC	1 cut(s)	2778
BsaI	GGTCTC	2 cut(s)	705, 2576
BsaWI	WCCGGW	2 cut(s)	3367, 3385
BsaXI	ACNNNNNCTCC	2 cut(s)	2628, 2658
Bsc4I	CCNNNNNNNGG	3 cut(s)	1016, 2099, 2506
Bse118I	RCCGGY	1 cut(s)	3367
Bse1I	ACTGG	4 cut(s)	998, 2058, 2545, 2846
Bse3DI	GCAATG	1 cut(s)	3172
Bse8I	GATNNNNATC	1 cut(s)	2778
BseBI	CCWGG	3 cut(s)	354, 468, 2343
BseGI	GGATG	8 cut(s)	340, 1432, 1444, 2315, 2394, 2782, 2810, 3506
BseJI	GATNNNNATC	1 cut(s)	2778
BseLI	CCNNNNNNNGG	3 cut(s)	1016, 2099, 2506
BseMI	GCAATG	1 cut(s)	3172
BseMII	CTCAG	6 cut(s)	794, 812, 1302, 2618, 2894, 2963
BseNI	ACTGG	4 cut(s)	998, 2058, 2545, 2846
BseRI	GAGGAG	3 cut(s)	36, 1313, 1579
BseXI	GCAGC	5 cut(s)	1513, 2776, 2876, 3344, 3394
BseYI	CCCAGC	1 cut(s)	2925
BsgI	GTGCAG	1 cut(s)	3343
Bsh1236I	CGCG	4 cut(s)	860, 1405, 2012, 3469
Bsh1285I	CGRYCG	7 cut(s)	85, 136, 193, 250, 307, 3186, 3372
BshFI	GGCC	8 cut(s)	39, 96, 147, 204, 261, 1684, 2845, 2954
BshTI	ACCGGT	1 cut(s)	3367
BsiEI	CGRYCG	7 cut(s)	85, 136, 193, 250, 307, 3186, 3372
BsiHKCI	CYCGRG	2 cut(s)	2168, 2957
BsiSI	CCGG	2 cut(s)	3368, 3386
BsiWI	CGTACG	1 cut(s)	1221
BslFI	GGGAC	4 cut(s)	403, 747, 775, 2394
BslI	CCNNNNNNNGG	3 cut(s)	1016, 2099, 2506
BsmFI	GGGAC	4 cut(s)	403, 747, 775, 2394
BsnI	GGCC	8 cut(s)	39, 96, 147, 204, 261, 1684, 2845, 2954
Bso31I	GGTCTC	2 cut(s)	705, 2576
BsoBI	CYCGRG	2 cut(s)	2168, 2957
Bsp1286I	GDGCHC	1 cut(s)	868
Bsp19I	CCATGG	4 cut(s)	148, 262, 1944, 2500
BspANI	GGCC	8 cut(s)	39, 96, 147, 204, 261, 1684, 2845, 2954
BspCNI	CTCAG	6 cut(s)	793, 811, 1301, 2617, 2893, 2962
BspFNI	CGCG	4 cut(s)	860, 1405, 2012, 3469
BspHI	TCATGA	2 cut(s)	1305, 2226
BspLI	GGNNCC	6 cut(s)	2136, 2175, 2249, 2403, 2955, 3381
BspOI	GCTAGC	1 cut(s)	1163
BspPI	GGATC	5 cut(s)	12, 1276, 2129, 2142, 2466
BspTNI	GGTCTC	2 cut(s)	705, 2576
BsrDI	GCAATG	1 cut(s)	3172
BsrFI	RCCGGY	1 cut(s)	3367
BsrI	ACTGG	4 cut(s)	998, 2058, 2545, 2846
BssAI	RCCGGY	1 cut(s)	3367
BssT1I	CCWWGG	6 cut(s)	148, 262, 1832, 1944, 2500, 3063
Bst2UI	CCWGG	3 cut(s)	354, 468, 2343
Bst6I	CTCTTC	4 cut(s)	1870, 2892, 3508, 3517
BstC8I	GCNNGC	5 cut(s)	441, 1161, 1371, 3439, 3556
BstDEI	CTNAG	9 cut(s)	780, 798, 1288, 1960, 2604, 2880, 2949, 3159, 3459
BstDSI	CCRYGG	8 cut(s)	40, 97, 148, 205, 262, 715, 1944, 2500
BstEII	GGTNACC	1 cut(s)	14
BstENI	CCTNNNNNAGG	1 cut(s)	1014
BstF5I	GGATG	8 cut(s)	340, 1432, 1444, 2315, 2394, 2782, 2810, 3506
BstFNI	CGCG	4 cut(s)	860, 1405, 2012, 3469
BstH2I	RGCGCY	1 cut(s)	1251
BstHHI	GCGC	2 cut(s)	860, 1250
BstMCI	CGRYCG	7 cut(s)	85, 136, 193, 250, 307, 3186, 3372
BstMWI	GCNNNNNNNGC	9 cut(s)	51, 108, 159, 216, 273, 1217, 2669, 3404, 3497
BstNI	CCWGG	3 cut(s)	354, 468, 2343
BstPAI	GACNNNNGTC	6 cut(s)	477, 549, 573, 597, 621, 739
BstPI	GGTNACC	1 cut(s)	14
BstSCI	CCNGG	3 cut(s)	352, 466, 2341
BstSFI	CTRYAG	1 cut(s)	3232
BstUI	CGCG	4 cut(s)	860, 1405, 2012, 3469
BstV1I	GCAGC	5 cut(s)	1513, 2776, 2876, 3344, 3394
BstV2I	GAAGAC	3 cut(s)	798, 3471, 3477
BstX2I	RGATCY	2 cut(s)	2134, 3537
BstYI	RGATCY	2 cut(s)	2134, 3537
BsuI	GTATCC	2 cut(s)	1505, 2549
BsuRI	GGCC	8 cut(s)	39, 96, 147, 204, 261, 1684, 2845, 2954
BtgI	CCRYGG	8 cut(s)	40, 97, 148, 205, 262, 715, 1944, 2500
BtgZI	GCGATG	1 cut(s)	3018
BtsCI	GGATG	8 cut(s)	340, 1432, 1444, 2315, 2394, 2782, 2810, 3506
BtsI	GCAGTG	1 cut(s)	2310
BtsIMutI	CAGTG	5 cut(s)	1464, 1722, 2180, 2310, 2612
Cac8I	GCNNGC	5 cut(s)	441, 1161, 1371, 3439, 3556
CciI	TCATGA	2 cut(s)	1305, 2226
CfoI	GCGC	2 cut(s)	860, 1250
Cfr10I	RCCGGY	1 cut(s)	3367
Cfr13I	GGNCC	2 cut(s)	2090, 2953
CspAI	ACCGGT	1 cut(s)	3367
DdeI	CTNAG	9 cut(s)	780, 798, 1288, 1960, 2604, 2880, 2949, 3159, 3459
DraI	TTTAAA	1 cut(s)	1276
EaeI	YGGCCR	5 cut(s)	37, 94, 145, 202, 259
Eam1104I	CTCTTC	4 cut(s)	1870, 2892, 3508, 3517
EarI	CTCTTC	4 cut(s)	1870, 2892, 3508, 3517
EciI	GGCGGA	5 cut(s)	72, 180, 237, 294, 399
Eco130I	CCWWGG	6 cut(s)	148, 262, 1832, 1944, 2500, 3063
Eco147I	AGGCCT	1 cut(s)	1684
Eco24I	GRGCYC	1 cut(s)	868
Eco31I	GGTCTC	2 cut(s)	705, 2576
Eco32I	GATATC	4 cut(s)	1117, 1146, 1792, 2107
Eco47I	GGWCC	1 cut(s)	2090
Eco47III	AGCGCT	1 cut(s)	1249
Eco57I	CTGAAG	3 cut(s)	1655, 2868, 3159
Eco88I	CYCGRG	2 cut(s)	2168, 2957
Eco91I	GGTNACC	1 cut(s)	14
EcoNI	CCTNNNNNAGG	1 cut(s)	1014
EcoO109I	RGGNCCY	1 cut(s)	2953
EcoO65I	GGTNACC	1 cut(s)	14
EcoRI	GAATTC	1 cut(s)	3454
EcoRII	CCWGG	3 cut(s)	352, 466, 2341
EcoRV	GATATC	4 cut(s)	1117, 1146, 1792, 2107
EcoT14I	CCWWGG	6 cut(s)	148, 262, 1832, 1944, 2500, 3063
EcoT38I	GRGCYC	1 cut(s)	868
ErhI	CCWWGG	6 cut(s)	148, 262, 1832, 1944, 2500, 3063
FalI	AAGNNNNNCTT	2 cut(s)	1628, 1660
FaqI	GGGAC	4 cut(s)	403, 747, 775, 2394
FauI	CCCGC	2 cut(s)	2794, 3139
FbaI	TGATCA	5 cut(s)	1461, 1729, 1810, 1885, 2650
FokI	GGATG	8 cut(s)	347, 1431, 1439, 2302, 2401, 2769, 2797, 3493
FriOI	GRGCYC	1 cut(s)	868
GlaI	GCGC	2 cut(s)	859, 1249
GsaI	CCCAGC	1 cut(s)	2929
GsuI	CTGGAG	1 cut(s)	2075
HaeII	RGCGCY	1 cut(s)	1251
HaeIII	GGCC	8 cut(s)	39, 96, 147, 204, 261, 1684, 2845, 2954
HapII	CCGG	2 cut(s)	3368, 3386
HhaI	GCGC	2 cut(s)	860, 1250
Hin6I	GCGC	2 cut(s)	858, 1248
HinP1I	GCGC	2 cut(s)	858, 1248
HincII	GTYRAC	1 cut(s)	3239
HindII	GTYRAC	1 cut(s)	3239
HindIII	AAGCTT	1 cut(s)	3439
HpaII	CCGG	2 cut(s)	3368, 3386
HphI	GGTGA	9 cut(s)	44, 101, 152, 209, 266, 1532, 2879, 2927, 3197
Hpy166II	GTNNAC	6 cut(s)	719, 2165, 3239, 3351, 3427, 3550
Hpy8I	GTNNAC	6 cut(s)	719, 2165, 3239, 3351, 3427, 3550
HpyAV	CCTTC	7 cut(s)	915, 1432, 1458, 2150, 3147, 3183, 3414
HpyF10VI	GCNNNNNNNGC	9 cut(s)	51, 108, 159, 216, 273, 1217, 2669, 3404, 3497
HpyF3I	CTNAG	9 cut(s)	780, 798, 1288, 1960, 2604, 2880, 2949, 3159, 3459
HspAI	GCGC	2 cut(s)	858, 1248
Ksp22I	TGATCA	5 cut(s)	1461, 1729, 1810, 1885, 2650
LmnI	GCTCC	7 cut(s)	1523, 2023, 2179, 2407, 2929, 3245, 3473
Lsp1109I	GCAGC	5 cut(s)	1513, 2776, 2876, 3344, 3394
LweI	GCATC	4 cut(s)	2324, 2328, 2379, 3567
MflI	RGATCY	2 cut(s)	2134, 3537
MhlI	GDGCHC	1 cut(s)	868
MlsI	TGGCCA	2 cut(s)	147, 261
MluNI	TGGCCA	2 cut(s)	147, 261
Mox20I	TGGCCA	2 cut(s)	147, 261
MroXI	GAANNNNTTC	2 cut(s)	1241, 2466
MscI	TGGCCA	2 cut(s)	147, 261
MseI	TTAA	8 cut(s)	1047, 1275, 1671, 2018, 2631, 2838, 3048, 3443
MslI	CAYNNNNRTG	5 cut(s)	378, 1107, 1760, 2499, 3276
Msp20I	TGGCCA	2 cut(s)	147, 261
MspA1I	CMGCKG	6 cut(s)	81, 132, 189, 246, 303, 2789
MspI	CCGG	2 cut(s)	3368, 3386
MspR9I	CCNGG	3 cut(s)	354, 468, 2343
MvaI	CCWGG	3 cut(s)	354, 468, 2343
MvnI	CGCG	4 cut(s)	860, 1405, 2012, 3469
MwoI	GCNNNNNNNGC	9 cut(s)	51, 108, 159, 216, 273, 1217, 2669, 3404, 3497
NcoI	CCATGG	4 cut(s)	148, 262, 1944, 2500
NheI	GCTAGC	1 cut(s)	1159
NlaIV	GGNNCC	6 cut(s)	2136, 2175, 2249, 2403, 2955, 3381
NmeAIII	GCCGAG	2 cut(s)	1471, 2605
NmuCI	GTSAC	7 cut(s)	746, 1720, 2035, 2266, 2599, 2885, 3517
PaeR7I	CTCGAG	1 cut(s)	2168
PagI	TCATGA	2 cut(s)	1305, 2226
PceI	AGGCCT	1 cut(s)	1684
PcsI	WCGNNNNNNNCGW	3 cut(s)	737, 3473, 3558
PdmI	GAANNNNTTC	2 cut(s)	1241, 2466
PfeI	GAWTC	5 cut(s)	890, 1479, 2003, 3310, 3316
Pfl23II	CGTACG	1 cut(s)	1221
PflFI	GACNNNGTC	5 cut(s)	512, 536, 656, 680, 723
PinAI	ACCGGT	1 cut(s)	3367
PshAI	GACNNNNGTC	6 cut(s)	477, 549, 573, 597, 621, 739
PshBI	ATTAAT	1 cut(s)	1047
Psp1406I	AACGTT	1 cut(s)	2371
Psp6I	CCWGG	3 cut(s)	352, 466, 2341
PspEI	GGTNACC	1 cut(s)	14
PspFI	CCCAGC	1 cut(s)	2925
PspGI	CCWGG	3 cut(s)	352, 466, 2341
PspLI	CGTACG	1 cut(s)	1221
PspN4I	GGNNCC	6 cut(s)	2136, 2175, 2249, 2403, 2955, 3381
PspPI	GGNCC	2 cut(s)	2090, 2953
PspXI	VCTCGAGB	1 cut(s)	2168
PsuI	RGATCY	2 cut(s)	2134, 3537
PsyI	GACNNNGTC	5 cut(s)	512, 536, 656, 680, 723
RseI	CAYNNNNRTG	5 cut(s)	378, 1107, 1760, 2499, 3276
SaqAI	TTAA	8 cut(s)	1047, 1275, 1671, 2018, 2631, 2838, 3048, 3443
Sau96I	GGNCC	2 cut(s)	2090, 2953
ScaI	AGTACT	2 cut(s)	1489, 2657
ScrFI	CCNGG	3 cut(s)	354, 468, 2343
SduI	GDGCHC	1 cut(s)	868
SfaNI	GCATC	4 cut(s)	2324, 2328, 2379, 3567
SfcI	CTRYAG	1 cut(s)	3232
Sfr274I	CTCGAG	1 cut(s)	2168
SinI	GGWCC	1 cut(s)	2090
SlaI	CTCGAG	1 cut(s)	2168
SmiMI	CAYNNNNRTG	5 cut(s)	378, 1107, 1760, 2499, 3276
SmlI	CTYRAG	6 cut(s)	444, 954, 1550, 2168, 2456, 2675
SmoI	CTYRAG	6 cut(s)	444, 954, 1550, 2168, 2456, 2675
SpeI	ACTAGT	1 cut(s)	2032
SseBI	AGGCCT	1 cut(s)	1684
SspI	AATATT	1 cut(s)	2725
StuI	AGGCCT	1 cut(s)	1684
StyD4I	CCNGG	3 cut(s)	352, 466, 2341
StyI	CCWWGG	6 cut(s)	148, 262, 1832, 1944, 2500, 3063
TatI	WGTACW	6 cut(s)	1487, 1561, 1641, 2164, 2655, 3426
TfiI	GAWTC	5 cut(s)	890, 1479, 2003, 3310, 3316
Tru1I	TTAA	8 cut(s)	1047, 1275, 1671, 2018, 2631, 2838, 3048, 3443
Tru9I	TTAA	8 cut(s)	1047, 1275, 1671, 2018, 2631, 2838, 3048, 3443
TscAI	CASTG	5 cut(s)	1471, 1729, 2187, 2317, 2612
TseFI	GTSAC	7 cut(s)	746, 1720, 2035, 2266, 2599, 2885, 3517
TseI	GCWGC	5 cut(s)	1526, 2789, 2864, 3357, 3407
Tsp45I	GTSAC	7 cut(s)	746, 1720, 2035, 2266, 2599, 2885, 3517
TspDTI	ATGAA	6 cut(s)	1318, 1451, 1744, 2752, 3461, 3495
TspGWI	ACGGA	6 cut(s)	129, 417, 1045, 1530, 2464, 2978
TspRI	CASTG	5 cut(s)	1471, 1729, 2187, 2317, 2612
Tth111I	GACNNNGTC	5 cut(s)	512, 536, 656, 680, 723
VpaK11BI	GGWCC	1 cut(s)	2090
VspI	ATTAAT	1 cut(s)	1047
XagI	CCTNNNNNAGG	1 cut(s)	1014
XapI	RAATTY	6 cut(s)	1129, 1751, 1796, 1909, 1933, 3454
XbaI	TCTAGA	1 cut(s)	3413
XhoI	CTCGAG	1 cut(s)	2168
XmnI	GAANNNNTTC	2 cut(s)	1241, 2466
ZrmI	AGTACT	2 cut(s)	1489, 2657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.