Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Reverse (-)

7076171 .. 7080524

Gene Structure 4354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g11980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3171 bp

ATGGAGAGAGGAAGAGGCGGTTACGGCGGAAGAGGGAACAACGGAGGAAGAGGCGGAGGAGAGAGAGGGAGCAGAGGCGGTTATGTAAACAGAGGAGGGAGAGTTGGTGGTTATGCTGACGTGGTTTACGGCGGCGGGAATGGCGGTCGAGGAGGAGCTGAGGGAGGAAGAGGCGGTTATGGTGGCGGCGGCGGTGAGAGAGGAAGAGGCGGTTATGGCGGAGGCGGCGAGAGAGGAAGAGGCGGTTATGGCGGAGGTTACAACCGTCAACAACCGCAAGATCAGAGGAGTAATCAGAGCCGCGGCCAGCCTGGGAGGTCTGATCAGCAATCTTGGAGGTCGCCTTCTTCGGCTTCTTCTCAGCCGCAAGATCAGCAGTCTTGGAGGTCTCCGGCTGCTTCTCAGCCGCAGGATCAGCAGGCTTGGAGGCCTTCTGGTCAACCGCCGCAGGAGCAGCAGTCGAGTCAGAATCGCGGCCAGTCTTGGAGGCCTAATCCGGCACCGTCTACCCCATCGTTTAACGATGCTCTTGTTTCTGGAGTGCAATCGCTGAAAATCTCGAAGCAGACACCATCTCCACCTTCGTTGAACAGTGCAGATAAACTTACACCTGCGAGACGACCTGATAAAGGAGGCGAAAGGTCTGTTAAGACTGTTGGGCTTCGTGCTAATCACTTCAATGTCTCGTACGATCCTCAGAGTACTATAATGCACTATGATATTCGTGTCAAACCAGTGAATGCTACAAGGAATGGCAGACCAGTTAGAATTATGAAGTCTGATCTTGCTGCAATCAGAAACAAGTTGTCCTCTGATAATCCAGCACAATTTCCGTTATTGATGACTGCTTATGATGGTGAGAAGAACATTTTCAGTGCTGTGACATTACCCACTGGAGAGTTCAGGGTGGAGGTTCCTGAGGAAGAAGGCACACGTTTAAGTTCGTATATAGTTACCATAAAGCTTGTAAACGAGCTCAAGCTTTGCAAGCTGAGGGAGTACTTAAATCGTGAGCTGTCCTCTATCCCTCGTGATATAATGCAGGGCATGGATTTAGTGATGAAGGAGAACCCGTCCCGGCGCTTGATTCCTGTTGGCCGCAGCTTTTACCCTGCGGAGTTTAATCCTGACGATGACCTTGGACAGGGTACTGCTGCATTTAGAGGGTTTCAGCATAGTTTAAGGCTCACTTCCCAGGGTCCTGCTCTGTGTCTGGACTACTCAGTTTTGGCATTTTATAAGCGCATGCCAGTTATAGATTTTCTCCATGAAAAGATATGGGGTTTTTCTTTAAATGATTTCAGGAGGTTTAGGAGAGAGGTTGAGAATGTTTTAAGGGGATTGAAAGTTACTGTGACTCATCGTCCAACCAAGCAGAAGTATGTCATCAAGGGGCTAACTGATAGGAATGCAGGGGACATTACATTTGATGCTGTTGATGTTGATGGCCTGGTTCCACCTAAGAGGCTTAGACTTGTTGATTACTTCAGAGACAAATACCAGGATATCAAGTACAAAAACATTCCTTGCTTGGATTTGGGAAAAAATGGTAGGAGGAATGATACACCGTTGGAATTCTGTGTCTTAGTTGAAGGGCAAAGGTACCCCAAGGAGCATTTGGGCAGAGATGCAGCAATTATGTTGAAGAACATGTCATTGGCTGCACCAAGGGTTAGAGAGAGTAACATACGCAACATGGTACGGTCGGAAGATGGACCTTGTGGTGGCGGCATCATCCAGAACTTTGGAATTGAAGTCAACATGAATATGACACAAGTAACAGGGCGTGTCATTGGCCCACCTGAGTTGAGGCTGGGTGCTTTTGGTGGCAAGGTGACTAAGGTAACAGTTGACAGTGAGAAATGTCACTGGAATCTAGTTGGCAAGTCATTAGTAGAAGGAAAACCAATATCTCGTTGGGCTGTACTTGACTTTAGCAGCCAAGACCGGGATGCACTGGACCCTAATCAATTCATCCCAAAGCTCATTGCTCGGTGCAACAAATTGGGAATGAGAATGGAAGGGCCTCGCTTTTATGAGACCACTTCAATGAGACCATTTTCTAGTGTTAACCTGCTTCGGGAACTGCTTGAAACTGTCAATGGGAAGGTACTTCAAGAAGGCTGGGGCCACTTACAATTACTTGTTTGTGTCATGTCCAGAAAAGACCCTGGTTACAAGTATCTGAAGTGGATCTGTGAGACTCAAATTGGTATAGTGACGCAGTGCTGCTTGTCAAAGATGGCCACCAAAGCCAGTGACCAGTTTCTTTCAAATCTTGCACTGAAGATCAATGCAAAGCTTGGAGGCAGTAATGTAGAGCTGATTGACAGGCTCCCGCTCTTTGAGGGTGCTGGCCCTGTCATGTTTGTGGGCGCAGACGTTAATCATCCTGCGGCTCGTAACACAACTAGTCCATCTATAGCAGCTGTGGTTGCCACTATAAACTGGCCTGCTGTGAATCGTTATGCTGCACGAGTTCGACCACAGTACCATCGTAAGGAGAGCATATTGAATTTTGGAGACATGGTTTTGGAGCTTGTTAAATCTTATTATCGAATGAATAAGGTCTTGCCCGAAAAAATTGTTGTTTTTCGAGATGGAGTATCTGAGGGGCAATTTGATATGGTACTTAATGAAGAGTTGGTAGATCTGAAGAGGGCTTTGGGAAGTATACAATATTATCCAACCATTACTCTGATTGTTGCTCAGAAACGGCATCATACGCGGCTGTTTCAGGAGAATGGGAGTTCCAATGTATCTCCAGGTACTGTTGTGGACACAACGATCGTGCACCCATTTGAGTTTGATTTCTATCTCTGCAGTCACTATGGAAGCCTTGGGACAAGCAAGCCGACGCACTACCATGTTCTTTGGGATGAGCACTCCTTTACTTCTGACCAGTTGCAGAAGCTCATATATGACTTGTGCTATACCTTTGCAAGGTGCACAAAACCCGTCTCTTTGGTTCCACCAGTGTACTATGCTGACCTTGTGGCCTACCGAGGGAGATTGTACCATGAGACCATGACGGAGGGACTCTCTCCAGGTTCCATAACATCCTCCTCCTCAGCATCATCATCGGCAACTTCAACACTGTCAGTGGGTTCTGTCGATGACGGGTTTTACAGATTGCATGCTGACCTGGAAGACATTATGTTTTTCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1057

Amino Acids

117.11

Weight (kDa)

9.42

Isoelectric Point (pI)

46.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	218 - 354	5.6e-22	N-terminal domain of argonaute
ArgoL1	PF08699	364 - 414	9.4e-13	Argonaute linker 1 domain
PAZ	PF02170	434 - 540	8.5e-21	PAZ domain
ArgoL2	PF16488	559 - 604	5.6e-07	Argonaute linker 2 domain
Piwi	PF02171	715 - 1004	3.2e-96	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1239
AarI	CACCTGC	1 cut(s)	619
Acc36I	ACCTGC	2 cut(s)	619, 2082
Acc65I	GGTACC	1 cut(s)	1602
AccB1I	GGYRCC	2 cut(s)	499, 1602
AccBSI	CCGCTC	1 cut(s)	2341
AccI	GTMKAC	2 cut(s)	506, 2674
AccII	CGCG	3 cut(s)	303, 474, 2728
AclWI	GGATC	3 cut(s)	420, 686, 2201
AcoI	YGGCCR	4 cut(s)	304, 475, 1096, 2244
AcsI	RAATTY	2 cut(s)	1574, 2515
AcuI	CTGAAG	4 cut(s)	1471, 2207, 2306, 2675
AfiI	CCNNNNNNNGG	8 cut(s)	629, 1144, 1724, 1948, 2080, 2500, 2943, 3006
AflIII	ACRYGT	2 cut(s)	932, 1650
AhdI	GACNNNNNGTC	1 cut(s)	1362
AhlI	ACTAGT	1 cut(s)	2411
AjiI	CACGTC	1 cut(s)	121
AjnI	CCWGG	8 cut(s)	310, 1194, 1449, 1500, 2170, 2764, 3046, 3144
AjuI	GAANNNNNNNTTGG	4 cut(s)	1640, 1672, 2648, 2680
Alw21I	GWGCWC	4 cut(s)	978, 2796, 2886, 2951
Alw44I	GTGCAC	2 cut(s)	2792, 2947
AlwI	GGATC	3 cut(s)	420, 686, 2201
AlwNI	CAGNNNCTG	1 cut(s)	2771
ApaLI	GTGCAC	2 cut(s)	2792, 2947
ApoI	RAATTY	2 cut(s)	1574, 2515
ArsI	GACNNNNNNTTYG	2 cut(s)	1409, 1441
Asp700I	GAANNNNTTC	1 cut(s)	869
Asp718I	GGTACC	1 cut(s)	1602
AspLEI	GCGC	3 cut(s)	1083, 1245, 2378
AspS9I	GGNCC	7 cut(s)	1199, 1715, 1796, 1960, 2024, 2128, 2357
AsuC2I	CCSGG	2 cut(s)	1078, 1949
AsuHPI	GGTGA	3 cut(s)	206, 869, 1846
AvaII	GGWCC	3 cut(s)	1199, 1715, 1960
AxyI	CCTNAGG	1 cut(s)	918
BaeGI	GKGCMC	2 cut(s)	2796, 2951
BaeI	ACNNNNGTAYC	4 cut(s)	2474, 2507, 2760, 2793
BalI	TGGCCA	1 cut(s)	2246
BanI	GGYRCC	2 cut(s)	499, 1602
BanII	GRGCYC	1 cut(s)	978
BauI	CACGAG	2 cut(s)	1029, 2475
BbsI	GAAGAC	1 cut(s)	3156
Bbv12I	GWGCWC	4 cut(s)	978, 2796, 2886, 2951
BbvCI	CCTCAGC	3 cut(s)	159, 992, 3070
BccI	CCATC	9 cut(s)	520, 580, 848, 1439, 1706, 2236, 2425, 2502, 2594
BceAI	ACGGC	3 cut(s)	40, 145, 2732
BcgI	CGANNNNNNTGC	2 cut(s)	3063, 3097
BciT130I	CCWGG	8 cut(s)	312, 1196, 1451, 1502, 2172, 2766, 3048, 3146
BclI	TGATCA	1 cut(s)	322
BcnI	CCSGG	2 cut(s)	1078, 1949
BcuI	ACTAGT	1 cut(s)	2411
BfaI	CTAG	3 cut(s)	1877, 2064, 2412
BfmI	CTRYAG	2 cut(s)	2421, 2821
BfoI	RGCGCY	1 cut(s)	1084
BfuAI	ACCTGC	2 cut(s)	619, 2082
BglII	AGATCT	1 cut(s)	2650
BmcAI	AGTACT	2 cut(s)	703, 1001
Bme18I	GGWCC	3 cut(s)	1199, 1715, 1960
BmeRI	GACNNNNNGTC	1 cut(s)	1362
BmgBI	CACGTC	1 cut(s)	121
BmgT120I	GGNCC	7 cut(s)	1199, 1715, 1796, 1960, 2024, 2128, 2357
BmsI	GCATC	7 cut(s)	514, 1420, 1618, 1740, 1942, 2728, 3083
BpiI	GAAGAC	1 cut(s)	3156
BplI	GAGNNNNNCTC	4 cut(s)	1004, 1036, 3026, 3058
BpmI	CTGGAG	4 cut(s)	558, 915, 2748, 3030
Bpu10I	CCTNAGC	3 cut(s)	159, 992, 3070
BpuEI	CTTGAG	1 cut(s)	962
BpuMI	CCSGG	2 cut(s)	1078, 1949
BsaBI	GATNNNNATC	1 cut(s)	2814
BsaI	GGTCTC	4 cut(s)	393, 2033, 2047, 3017
Bsc4I	CCNNNNNNNGG	8 cut(s)	629, 1144, 1724, 1948, 2080, 2500, 2943, 3006
Bse21I	CCTNAGG	1 cut(s)	918
Bse3DI	GCAATG	1 cut(s)	1986
Bse8I	GATNNNNATC	1 cut(s)	2814
BseBI	CCWGG	8 cut(s)	312, 1196, 1451, 1502, 2172, 2766, 3048, 3146
BseGI	GGATG	6 cut(s)	1734, 1957, 1974, 2389, 2884, 3059
BseJI	GATNNNNATC	1 cut(s)	2814
BseLI	CCNNNNNNNGG	8 cut(s)	629, 1144, 1724, 1948, 2080, 2500, 2943, 3006
BseMI	GCAATG	1 cut(s)	1986
BseRI	GAGGAG	7 cut(s)	72, 108, 165, 168, 301, 3055, 3058
BseSI	GKGCMC	2 cut(s)	2796, 2951
BseYI	CCCAGC	2 cut(s)	1813, 2124
BsgI	GTGCAG	3 cut(s)	615, 1647, 2457
Bsh1236I	CGCG	3 cut(s)	303, 474, 2728
Bsh1285I	CGRYCG	3 cut(s)	148, 1706, 2790
BshNI	GGYRCC	2 cut(s)	499, 1602
BsiEI	CGRYCG	3 cut(s)	148, 1706, 2790
BsiHKAI	GWGCWC	4 cut(s)	978, 2796, 2886, 2951
BsiSI	CCGG	4 cut(s)	392, 497, 1078, 1948
BsiWI	CGTACG	1 cut(s)	687
BslFI	GGGAC	4 cut(s)	1060, 1430, 2857, 3051
BslI	CCNNNNNNNGG	8 cut(s)	629, 1144, 1724, 1948, 2080, 2500, 2943, 3006
BsmBI	CGTCTC	2 cut(s)	610, 2965
BsmFI	GGGAC	4 cut(s)	1060, 1430, 2857, 3051
BsmI	GAATGC	2 cut(s)	745, 1414
Bso31I	GGTCTC	4 cut(s)	393, 2033, 2047, 3017
Bsp1286I	GDGCHC	4 cut(s)	978, 2796, 2886, 2951
BspFNI	CGCG	3 cut(s)	303, 474, 2728
BspMAI	CTGCAG	1 cut(s)	2825
BspMI	ACCTGC	2 cut(s)	619, 2082
BspPI	GGATC	3 cut(s)	420, 686, 2201
BspT107I	GGYRCC	2 cut(s)	499, 1602
BspTNI	GGTCTC	4 cut(s)	393, 2033, 2047, 3017
BsrBI	CCGCTC	1 cut(s)	2341
BsrDI	GCAATG	1 cut(s)	1986
BssNAI	GTATAC	1 cut(s)	2675
BssSI	CACGAG	2 cut(s)	1029, 2475
BssT1I	CCWWGG	4 cut(s)	1138, 1608, 1667, 2839
Bst1107I	GTATAC	1 cut(s)	2675
Bst2BI	CACGAG	2 cut(s)	1029, 2475
Bst2UI	CCWGG	8 cut(s)	312, 1196, 1451, 1502, 2172, 2766, 3048, 3146
Bst6I	CTCTTC	8 cut(s)	7, 25, 43, 163, 199, 232, 2634, 2651
BstC8I	GCNNGC	8 cut(s)	308, 420, 989, 1247, 2356, 2454, 2852, 3138
BstDSI	CCRYGG	1 cut(s)	301
BstENI	CCTNNNNNAGG	3 cut(s)	627, 1142, 2941
BstF5I	GGATG	6 cut(s)	1734, 1957, 1974, 2389, 2884, 3059
BstFNI	CGCG	3 cut(s)	303, 474, 2728
BstH2I	RGCGCY	1 cut(s)	1084
BstHHI	GCGC	3 cut(s)	1083, 1245, 2378
BstMCI	CGRYCG	3 cut(s)	148, 1706, 2790
BstNI	CCWGG	8 cut(s)	312, 1196, 1451, 1502, 2172, 2766, 3048, 3146
BstNSI	RCATGY	3 cut(s)	1249, 1654, 3140
BstSFI	CTRYAG	2 cut(s)	2421, 2821
BstSLI	GKGCMC	2 cut(s)	2796, 2951
BstUI	CGCG	3 cut(s)	303, 474, 2728
BstV2I	GAAGAC	1 cut(s)	3156
BstX2I	RGATCY	2 cut(s)	2193, 2650
BstXI	CCANNNNNNTGG	1 cut(s)	1745
BstYI	RGATCY	2 cut(s)	2193, 2650
BstZ17I	GTATAC	1 cut(s)	2675
Bsu36I	CCTNAGG	1 cut(s)	918
BtgI	CCRYGG	1 cut(s)	301
BtrI	CACGTC	1 cut(s)	121
BtsCI	GGATG	6 cut(s)	1734, 1957, 1974, 2389, 2884, 3059
BtsI	GCAGTG	1 cut(s)	2231
BveI	ACCTGC	2 cut(s)	619, 2082
Cac8I	GCNNGC	8 cut(s)	308, 420, 989, 1247, 2356, 2454, 2852, 3138
CaiI	CAGNNNCTG	1 cut(s)	2771
CfoI	GCGC	3 cut(s)	1083, 1245, 2378
Cfr13I	GGNCC	7 cut(s)	1199, 1715, 1796, 1960, 2024, 2128, 2357
Cfr42I	CCGCGG	1 cut(s)	304
CseI	GACGC	2 cut(s)	2230, 2866
CspCI	CAANNNNNGTGG	4 cut(s)	567, 602, 1788, 1823
DraI	TTTAAA	1 cut(s)	1293
DriI	GACNNNNNGTC	1 cut(s)	1362
EaeI	YGGCCR	4 cut(s)	304, 475, 1096, 2244
Eam1104I	CTCTTC	8 cut(s)	7, 25, 43, 163, 199, 232, 2634, 2651
Eam1105I	GACNNNNNGTC	1 cut(s)	1362
EarI	CTCTTC	8 cut(s)	7, 25, 43, 163, 199, 232, 2634, 2651
EciI	GGCGGA	4 cut(s)	42, 69, 234, 267
Ecl136II	GAGCTC	1 cut(s)	976
Eco130I	CCWWGG	4 cut(s)	1138, 1608, 1667, 2839
Eco147I	AGGCCT	2 cut(s)	430, 490
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	4 cut(s)	393, 2033, 2047, 3017
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	3 cut(s)	1199, 1715, 1960
Eco53kI	GAGCTC	1 cut(s)	976
Eco57I	CTGAAG	4 cut(s)	1471, 2207, 2306, 2675
Eco81I	CCTNAGG	1 cut(s)	918
EcoICRI	GAGCTC	1 cut(s)	976
EcoNI	CCTNNNNNAGG	3 cut(s)	627, 1142, 2941
EcoO109I	RGGNCCY	2 cut(s)	1199, 2024
EcoRI	GAATTC	1 cut(s)	1574
EcoRII	CCWGG	8 cut(s)	310, 1194, 1449, 1500, 2170, 2764, 3046, 3144
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	4 cut(s)	1138, 1608, 1667, 2839
EcoT38I	GRGCYC	1 cut(s)	978
ErhI	CCWWGG	4 cut(s)	1138, 1608, 1667, 2839
Esp3I	CGTCTC	2 cut(s)	610, 2965
FalI	AAGNNNNNCTT	2 cut(s)	1174, 1206
FaqI	GGGAC	4 cut(s)	1060, 1430, 2857, 3051
FauI	CCCGC	2 cut(s)	128, 2346
FbaI	TGATCA	1 cut(s)	322
FblI	GTMKAC	2 cut(s)	506, 2674
FokI	GGATG	6 cut(s)	1721, 1961, 1964, 2376, 2891, 3046
FriOI	GRGCYC	1 cut(s)	978
FspBI	CTAG	3 cut(s)	1877, 2064, 2412
GlaI	GCGC	3 cut(s)	1082, 1244, 2377
GsaI	CCCAGC	2 cut(s)	1817, 2128
GsuI	CTGGAG	4 cut(s)	558, 915, 2748, 3030
HaeII	RGCGCY	1 cut(s)	1084
HapII	CCGG	4 cut(s)	392, 497, 1078, 1948
HgaI	GACGC	2 cut(s)	2230, 2866
HhaI	GCGC	3 cut(s)	1083, 1245, 2378
Hin6I	GCGC	3 cut(s)	1081, 1243, 2376
HinP1I	GCGC	3 cut(s)	1081, 1243, 2376
HincII	GTYRAC	5 cut(s)	269, 440, 1759, 1852, 2071
HindII	GTYRAC	5 cut(s)	269, 440, 1759, 1852, 2071
HindIII	AAGCTT	3 cut(s)	962, 980, 2300
HinfI	GANTC	8 cut(s)	463, 469, 1087, 1357, 1873, 2203, 2461, 3039
HpaI	GTTAAC	1 cut(s)	2071
HpaII	CCGG	4 cut(s)	392, 497, 1078, 1948
HphI	GGTGA	3 cut(s)	206, 869, 1846
Hpy99I	CGWCG	1 cut(s)	2860
HpyCH4IV	ACGT	3 cut(s)	120, 934, 2382
HpySE526I	ACGT	3 cut(s)	120, 934, 2382
HspAI	GCGC	3 cut(s)	1081, 1243, 2376
KpnI	GGTACC	1 cut(s)	1606
Ksp22I	TGATCA	1 cut(s)	322
KspAI	GTTAAC	1 cut(s)	2071
KspI	CCGCGG	1 cut(s)	304
LmnI	GCTCC	6 cut(s)	69, 155, 451, 1612, 2340, 2536
LweI	GCATC	7 cut(s)	514, 1420, 1618, 1740, 1942, 2728, 3083
MaeI	CTAG	3 cut(s)	1877, 2064, 2412
MaeII	ACGT	3 cut(s)	120, 934, 2382
MbiI	CCGCTC	1 cut(s)	2341
MflI	RGATCY	2 cut(s)	2193, 2650
MhlI	GDGCHC	4 cut(s)	978, 2796, 2886, 2951
MlsI	TGGCCA	1 cut(s)	2246
MluNI	TGGCCA	1 cut(s)	2246
MlyI	GAGTC	4 cut(s)	472, 1351, 2197, 3033
MmeI	TCCRAC	4 cut(s)	1391, 1551, 1686, 2711
Mox20I	TGGCCA	1 cut(s)	2246
MroXI	GAANNNNTTC	1 cut(s)	869
MscI	TGGCCA	1 cut(s)	2246
MslI	CAYNNNNRTG	5 cut(s)	678, 1766, 2048, 2369, 2865
Msp20I	TGGCCA	1 cut(s)	2246
MspA1I	CMGCKG	2 cut(s)	303, 2429
MspI	CCGG	4 cut(s)	392, 497, 1078, 1948
Mva1269I	GAATGC	2 cut(s)	745, 1414
MvaI	CCWGG	8 cut(s)	312, 1196, 1451, 1502, 2172, 2766, 3048, 3146
MvnI	CGCG	3 cut(s)	303, 474, 2728
NciI	CCSGG	2 cut(s)	1078, 1949
NmuCI	GTSAC	7 cut(s)	880, 1354, 1834, 1865, 2218, 2258, 2825
NspI	RCATGY	3 cut(s)	1249, 1654, 3140
PaeI	GCATGC	2 cut(s)	1249, 3140
PaqCI	CACCTGC	1 cut(s)	619
PasI	CCCWGGG	1 cut(s)	1195
PceI	AGGCCT	2 cut(s)	430, 490
PciI	ACATGT	1 cut(s)	1650
PctI	GAATGC	2 cut(s)	745, 1414
PdmI	GAANNNNTTC	1 cut(s)	869
PfeI	GAWTC	4 cut(s)	469, 1087, 1873, 2461
Pfl23II	CGTACG	1 cut(s)	687
Ple19I	CGATCG	1 cut(s)	2790
PleI	GAGTC	4 cut(s)	471, 1351, 2197, 3033
PpsI	GAGTC	4 cut(s)	471, 1351, 2197, 3033
PpuMI	RGGWCCY	1 cut(s)	1199
PscI	ACATGT	1 cut(s)	1650
PsiI	TTATAA	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	978
Psp5II	RGGWCCY	1 cut(s)	1199
Psp6I	CCWGG	8 cut(s)	310, 1194, 1449, 1500, 2170, 2764, 3046, 3144
PspFI	CCCAGC	2 cut(s)	1813, 2124
PspGI	CCWGG	8 cut(s)	310, 1194, 1449, 1500, 2170, 2764, 3046, 3144
PspLI	CGTACG	1 cut(s)	687
PspPI	GGNCC	7 cut(s)	1199, 1715, 1796, 1960, 2024, 2128, 2357
PspPPI	RGGWCCY	1 cut(s)	1199
PstI	CTGCAG	1 cut(s)	2825
PstNI	CAGNNNCTG	1 cut(s)	2771
PsuI	RGATCY	2 cut(s)	2193, 2650
PvuI	CGATCG	1 cut(s)	2790
PvuII	CAGCTG	1 cut(s)	2429
RseI	CAYNNNNRTG	5 cut(s)	678, 1766, 2048, 2369, 2865
SacI	GAGCTC	1 cut(s)	978
SacII	CCGCGG	1 cut(s)	304
Sau96I	GGNCC	7 cut(s)	1199, 1715, 1796, 1960, 2024, 2128, 2357
ScaI	AGTACT	2 cut(s)	703, 1001
SchI	GAGTC	4 cut(s)	472, 1351, 2197, 3033
SduI	GDGCHC	4 cut(s)	978, 2796, 2886, 2951
SfaNI	GCATC	7 cut(s)	514, 1420, 1618, 1740, 1942, 2728, 3083
SfcI	CTRYAG	2 cut(s)	2421, 2821
Sfr303I	CCGCGG	1 cut(s)	304
SgrBI	CCGCGG	1 cut(s)	304
SinI	GGWCC	3 cut(s)	1199, 1715, 1960
SmiMI	CAYNNNNRTG	5 cut(s)	678, 1766, 2048, 2369, 2865
SmlI	CTYRAG	1 cut(s)	977
SmoI	CTYRAG	1 cut(s)	977
SpeI	ACTAGT	1 cut(s)	2411
SphI	GCATGC	2 cut(s)	1249, 3140
SseBI	AGGCCT	2 cut(s)	430, 490
SspI	AATATT	1 cut(s)	2681
SspMI	CTAG	3 cut(s)	1877, 2064, 2412
SstI	GAGCTC	1 cut(s)	978
StuI	AGGCCT	2 cut(s)	430, 490
StyI	CCWWGG	4 cut(s)	1138, 1608, 1667, 2839
TaiI	ACGT	3 cut(s)	123, 937, 2385
TaqI	TCGA	7 cut(s)	148, 461, 560, 2482, 2557, 2596, 3114
TatI	WGTACW	5 cut(s)	701, 999, 1512, 1924, 2979
TfiI	GAWTC	4 cut(s)	469, 1087, 1873, 2461
TseFI	GTSAC	7 cut(s)	880, 1354, 1834, 1865, 2218, 2258, 2825
Tsp45I	GTSAC	7 cut(s)	880, 1354, 1834, 1865, 2218, 2258, 2825
TspDTI	ATGAA	8 cut(s)	788, 1076, 1284, 1778, 1963, 2576, 2652, 3154
TspGWI	ACGGA	3 cut(s)	57, 822, 3047
VneI	GTGCAC	2 cut(s)	2792, 2947
VpaK11BI	GGWCC	3 cut(s)	1199, 1715, 1960
XagI	CCTNNNNNAGG	3 cut(s)	627, 1142, 2941
XapI	RAATTY	2 cut(s)	1574, 2515
XceI	RCATGY	3 cut(s)	1249, 1654, 3140
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1615, 1914
XmiI	GTMKAC	2 cut(s)	506, 2674
XmnI	GAANNNNTTC	1 cut(s)	869
XspI	CTAG	3 cut(s)	1877, 2064, 2412
ZrmI	AGTACT	2 cut(s)	703, 1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.