Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Forward (+)

80412017 .. 80416436

Gene Structure 4420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00058500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3192 bp

ATGGAAAGAGGAAGAGGCGGCGGTTACGGCGGCCGTAGCGGCGGTTACGGTGGCAGAGGGAACAACGGAGGAAGAGGCGGAGGGGAGAGAGAGAGAGGGAGAGGCGGTTATGGTAATAGAGGAGGAGGGAGAGTCGGCGGTTATGCTGACGTGGTTTACGGCGGTGGGAATGGCGGTCGAGGAGGAGGAGGAGGTGAGAGAGGAAGAGGTGGTTATGGCGGTGGTGGTGGTTACAACCGTCAACAACCACCGCAGCAAGATCAGCAGTGGAATAATCAGAATCGCGGCCAGTCTGGGAGGTCTGATCAGCAAACTTGGAGGTCTTCTTCTCAGCCGCATGATCAGCAGTCTGGGAGGTATTCGGCCTCTTCTCAACCGCAGGATCAGCAGCCTTGGAGGTCTTCTGGTCAACCGCCACAGGAGCAGCAGTGGAGTCAGAATCGAGGCCAGCCTCGGAGGACTACTCCGGCACCGGCACCGTCTTCTTCTTCATCTCCTTCTCCAACCAAGAACAGTCTTGCTGACGCTGTTGTTTCTGGAGTGCAATCACTGAAAATTTCAAAGCAGACATCTCCGCCATCTCCGTTGAACAGTGCAGACAAACTTCTACCTGTGAGACGACCTGATCAGGGAGGCACAAAGGCTGTCCAAACTGTTAGGCTTCGTGCTAATCACTTCAATGTCTCGTACAATCCTCAGAGTACTATAATGCACTATGATGTTAATGTCAAACCAGTGAATGCTACAAGGAATGGCAGACCAGTTAGAATTATGAAGTCTGATCTTGCTGCAATCAGAAGCAAGTTGTCCTCTGATAATCCTTCAAAATTTCCGTTATTGATGACTGCATATGATGGTGAGAAGAATATCTTTAGTGCTGTGACATTACCCACTGGAGAGTTTAAGGTGGAGGTTCCTGAGGAAGAAGGCACACGCATAAGTTCGTATATAGTCACTATAAAACTTGTAAATGAGCTCAAGCTTTGCAAGTTGAAGGAGTACTTAAGTGGTCAGCTGTTGTCTATCCCTCGTGATATATTGCAGGGAATGGATTTAGTGATGAAGGAGAATCCTACTCGGCGGTTGATTCCTGTTGGCCGCAGCTTTTACCCTGCCGAATTTAATCCAGACGATGACCTTGGACAGGGTACTGCTGCATTTAGAGGGTTTCAGCATAGTTTAAGGCTCACTTCCCAGGGTCCTGCTATGTGTCTGGACTACTCAGTCTTGGCATTTCATAAGCGCATGCCAGTTATAGATTTTCTCCATGAAAAGATAAGGAATTTTACTTTAAATAATTTCAGGAGGTTCAGAAGAGATGTTGAGAATGTTTTAAGGGGATTGAAAGTTACTGTGACTCATCGTCCAACCAAGCAGAAGTATGTTATCAAGGGGCTAACTGATAGGAATGCAGGGGACATTACATTTGAAGCTGTTGATGTTGATGGCCAGGTTCCACCTAGAAGGCTTAGACTTGTTGATTATTTCAGAGACAAATACAAGGATATCAAGTACAAAGACATTCCCTGCTTAGATTTGGGGAAAAATGGTAGGAGGAATGATACACCGTTGGAATTTTGTGTCTTAGTTGAAGGGCAAAGATACCCTAAGGAGCAGTTGGGCAGAGATGCAGCCATTATGTTGAAGAACTTGTCATTGGTTGCACCAGGGGTTAGAGAGAACAACATACGCAACATGGTACGGTCGGGAGATGGACCTTGTGGTGGTGGCATTATCCAGAACTTTGGAATTGAAGTCAACATGAATATGACACAAGTAACAGGGCGTGTCCTTGGCCCACCTGAGTTGAAGCTGGGGGATTTTGGTGGCAAGGTGACTAAAGTAAAAGTTGACAATGAGAAATGTCACTGGAATCTAGTTGGCAAGTCATTAGTGGAAGGAAAACCAATAGCTCGCTGGGCTGTGCTTGACTTTAGCTGTCATGATCAAGACTGTTATGATCGGGACAGACTGGACCCTTATCAATTCATCCCACATCTCATCACTCGGTGCAACAAATTGGGAATGAGAATGGAAGAGCCTCGCTTGTATGAAACCTCTTCCATGAGACCATTTTCTAGCGTCAACTTGCTTCGGGAACTGCTTGAAACTGTTAATGGGAAGGTACTTCAAGAAGGCAAGGGCCACTTACAACTACTTGTTTGTGTAATGTCTAGAAAAGACCCTGGTTACAAGTATCTGAAGTGGATCTGTGAGACTCAAATTGGTATAGTGACGCAGTGCTGCTTGTCAAAGATGGCCACCAGGCCCAGTGACCAGTTTCTTGCAAATCTTGCACTGAAGATCAATGCGAAGCTTGGAGGCAGTAATGTAGAGCTGATTGACCGGCTCCCGCTCTTTGAGGGTGCTGGCCCTGTTATGTTTGTGGGGGCTGACGTTAATCATCCTGCGGCTCGGAACACAACAAGTCCATCAATAGCAGCTGTGGTTGCCACTATAAACTGGCCTGCTGTGAATCGTTATGCTGCACGAGTCCGACCCCAGTACCATCGTACTGAGAGCATATCGAATTTTGGAGACATGGTTTTGGAGCTTGTTGAATCGTATTTTAGAATAAATAAAGTGAAGCCGGAAAAAATTGTTGTTTTCCGAGATGGTGTAAGTGAGGGGCAATTTGATATGGTTCTCAATGAAGAGTTACTAGATCTGAAGAGGGCTTTGGGAACTATAAACTACTTTCCAACCATCACTCTGATTGTTGCTCAAAAGCGGCATCATACTCGGCTGTTTCAGGAGAATGGACGTTCCAATGTATCTCCAGGAACTGTTGTGGACACAAGGATTGTGCACCCATTTGAGTTTGACTTCTATCTCTGCAGTCACTATGGAAGCCTTGGGACAAGCAAGCCGACACACTACTATGTTCTTTGGGATGAGCACAGTTTTACTTCCGACCAGTTGCAGAAGCTCATATATGACTTGTGCTTTACCTTTGCAAGGTGCACGAAACCTGTCTCTTTGGTTCCGCCAGTGTACTATGCTGACCTTGTGGCCTACAGAGGGAGATTGTACCATGAGACTATGACTGCGGGACTGTCTCCAGGTTCCGTAACATCCTCCTCCTCATCAGCATCATCATCATCGGCACCTTCAACACTGTCAGTGGGTTCTCTGGATGACAGGTTTTATAGATTGCATGTTGACCTGGAAAACATTATGTTTTTCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1063

Amino Acids

118.21

Weight (kDa)

9.49

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	218 - 354	2.9e-23	N-terminal domain of argonaute
ArgoL1	PF08699	364 - 414	2.4e-11	Argonaute linker 1 domain
PAZ	PF02170	432 - 541	1.7e-21	PAZ domain
ArgoL2	PF16488	559 - 604	3.4e-08	Argonaute linker 2 domain
Piwi	PF02171	720 - 1009	9.3e-93	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1223
AccB1I	GGYRCC	3 cut(s)	469, 475, 3106
AccBSI	CCGCTC	1 cut(s)	2356
AccII	CGCG	1 cut(s)	285
AclWI	GGATC	2 cut(s)	390, 2216
AcoI	YGGCCR	5 cut(s)	31, 286, 1096, 1447, 2259
AcsI	RAATTY	6 cut(s)	555, 827, 1118, 1282, 1574, 2530
AcuI	CTGAAG	3 cut(s)	2222, 2321, 2690
AdeI	CACNNNGTG	1 cut(s)	2010
AfiI	CCNNNNNNNGG	5 cut(s)	629, 1144, 1724, 2958, 3021
AflII	CTTAAG	1 cut(s)	1003
AhdI	GACNNNNNGTC	1 cut(s)	1362
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
AjuI	GAANNNNNNNTTGG	4 cut(s)	1640, 1672, 2663, 2695
Alw21I	GWGCWC	4 cut(s)	978, 2811, 2901, 2966
Alw26I	GTCTC	9 cut(s)	610, 688, 1485, 2062, 2210, 2532, 2980, 3032, 3063
Alw44I	GTGCAC	2 cut(s)	2807, 2962
AlwI	GGATC	2 cut(s)	390, 2216
AlwNI	CAGNNNCTG	1 cut(s)	2786
ApaLI	GTGCAC	2 cut(s)	2807, 2962
ApoI	RAATTY	6 cut(s)	555, 827, 1118, 1282, 1574, 2530
ArsI	GACNNNNNNTTYG	2 cut(s)	1409, 1441
AspLEI	GCGC	1 cut(s)	1245
AspS9I	GGNCC	7 cut(s)	1199, 1715, 1796, 1975, 2143, 2268, 2372
AsuHPI	GGTGA	3 cut(s)	206, 869, 1846
AvaII	GGWCC	3 cut(s)	1199, 1715, 1975
AxyI	CCTNAGG	2 cut(s)	918, 1608
BaeGI	GKGCMC	2 cut(s)	2811, 2966
BaeI	ACNNNNGTAYC	2 cut(s)	2489, 2522
BalI	TGGCCA	2 cut(s)	1449, 2261
BanI	GGYRCC	3 cut(s)	469, 475, 3106
BanII	GRGCYC	1 cut(s)	978
BauI	CACGAG	2 cut(s)	1029, 2490
BbsI	GAAGAC	3 cut(s)	315, 393, 474
Bbv12I	GWGCWC	4 cut(s)	978, 2811, 2901, 2966
BccI	CCATC	9 cut(s)	586, 848, 1439, 1706, 2251, 2440, 2517, 2609, 2714
BceAI	ACGGC	3 cut(s)	18, 43, 175
BcgI	CGANNNNNNTGC	2 cut(s)	2723, 2757
BciT130I	CCWGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
BclI	TGATCA	4 cut(s)	304, 340, 625, 1945
BcoDI	GTCTC	9 cut(s)	610, 688, 1485, 2062, 2210, 2532, 2980, 3032, 3063
BfaI	CTAG	5 cut(s)	1461, 1877, 2079, 2175, 2663
BfmI	CTRYAG	2 cut(s)	2836, 3016
BfrI	CTTAAG	1 cut(s)	1003
BglI	GCCNNNNNGGC	1 cut(s)	39
BglII	AGATCT	1 cut(s)	2665
BmcAI	AGTACT	2 cut(s)	703, 1001
Bme1390I	CCNGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
Bme18I	GGWCC	3 cut(s)	1199, 1715, 1975
BmeRI	GACNNNNNGTC	1 cut(s)	1362
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	7 cut(s)	1199, 1715, 1796, 1975, 2143, 2268, 2372
BmrFI	CCNGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
BmrI	ACTGGG	2 cut(s)	2265, 2497
BmsI	GCATC	3 cut(s)	1618, 2743, 3101
BmuI	ACTGGG	2 cut(s)	2265, 2497
BpiI	GAAGAC	3 cut(s)	315, 393, 474
BplI	GAGNNNNNCTC	2 cut(s)	448, 480
BpmI	CTGGAG	4 cut(s)	558, 915, 2763, 3045
BpuEI	CTTGAG	1 cut(s)	962
BsaI	GGTCTC	1 cut(s)	2062
BsaJI	CCNNGG	9 cut(s)	392, 452, 1138, 1194, 1195, 1667, 1792, 2185, 2854
BsaXI	ACNNNNNCTCC	8 cut(s)	91, 117, 121, 147, 413, 443, 2529, 2559
Bsc4I	CCNNNNNNNGG	5 cut(s)	629, 1144, 1724, 2958, 3021
Bse118I	RCCGGY	2 cut(s)	472, 2346
Bse21I	CCTNAGG	2 cut(s)	918, 1608
BseBI	CCWGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
BseDI	CCNNGG	9 cut(s)	392, 452, 1138, 1194, 1195, 1667, 1792, 2185, 2854
BseGI	GGATG	5 cut(s)	1989, 2404, 2899, 3074, 3142
BseLI	CCNNNNNNNGG	5 cut(s)	629, 1144, 1724, 2958, 3021
BseMII	CTCAG	6 cut(s)	344, 710, 909, 1236, 1794, 2508
BseRI	GAGGAG	8 cut(s)	135, 138, 195, 198, 201, 204, 3070, 3073
BseSI	GKGCMC	2 cut(s)	2811, 2966
BseX3I	CGGCCG	1 cut(s)	31
BseYI	CCCAGC	2 cut(s)	1813, 1917
BsgI	GTGCAG	2 cut(s)	615, 2472
Bsh1236I	CGCG	1 cut(s)	285
Bsh1285I	CGRYCG	3 cut(s)	34, 178, 1706
BshNI	GGYRCC	3 cut(s)	469, 475, 3106
BsiEI	CGRYCG	3 cut(s)	34, 178, 1706
BsiHKAI	GWGCWC	4 cut(s)	978, 2811, 2901, 2966
BsiSI	CCGG	4 cut(s)	467, 473, 2347, 2591
BslFI	GGGAC	4 cut(s)	1430, 1979, 2872, 3066
BslI	CCNNNNNNNGG	5 cut(s)	629, 1144, 1724, 2958, 3021
BsmAI	GTCTC	9 cut(s)	610, 688, 1485, 2062, 2210, 2532, 2980, 3032, 3063
BsmBI	CGTCTC	1 cut(s)	610
BsmFI	GGGAC	4 cut(s)	1430, 1979, 2872, 3066
BsmI	GAATGC	2 cut(s)	745, 1414
Bso31I	GGTCTC	1 cut(s)	2062
Bsp1286I	GDGCHC	4 cut(s)	978, 2811, 2901, 2966
BspCNI	CTCAG	6 cut(s)	343, 709, 910, 1235, 1795, 2509
BspFNI	CGCG	1 cut(s)	285
BspHI	TCATGA	1 cut(s)	1942
BspMAI	CTGCAG	1 cut(s)	2840
BspPI	GGATC	2 cut(s)	390, 2216
BspQI	GCTCTTC	1 cut(s)	2031
BspT107I	GGYRCC	3 cut(s)	469, 475, 3106
BspTI	CTTAAG	1 cut(s)	1003
BspTNI	GGTCTC	1 cut(s)	2062
BsrBI	CCGCTC	1 cut(s)	2356
BsrFI	RCCGGY	2 cut(s)	472, 2346
BssAI	RCCGGY	2 cut(s)	472, 2346
BssECI	CCNNGG	9 cut(s)	392, 452, 1138, 1194, 1195, 1667, 1792, 2185, 2854
BssSI	CACGAG	2 cut(s)	1029, 2490
BssT1I	CCWWGG	4 cut(s)	392, 1138, 1792, 2854
Bst2BI	CACGAG	2 cut(s)	1029, 2490
Bst2UI	CCWGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
Bst6I	CTCTTC	9 cut(s)	7, 67, 199, 373, 1309, 2031, 2065, 2649, 2666
BstAFI	CTTAAG	1 cut(s)	1003
BstAPI	GCANNNNNTGC	1 cut(s)	2294
BstC8I	GCNNGC	6 cut(s)	449, 1247, 1915, 2371, 2469, 2867
BstENI	CCTNNNNNAGG	2 cut(s)	1142, 2956
BstF5I	GGATG	5 cut(s)	1989, 2404, 2899, 3074, 3142
BstFNI	CGCG	1 cut(s)	285
BstHHI	GCGC	1 cut(s)	1245
BstMAI	GTCTC	9 cut(s)	610, 688, 1485, 2062, 2210, 2532, 2980, 3032, 3063
BstMCI	CGRYCG	3 cut(s)	34, 178, 1706
BstNI	CCWGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
BstNSI	RCATGY	2 cut(s)	1249, 3161
BstSCI	CCNGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
BstSFI	CTRYAG	2 cut(s)	2836, 3016
BstSLI	GKGCMC	2 cut(s)	2811, 2966
BstUI	CGCG	1 cut(s)	285
BstV2I	GAAGAC	3 cut(s)	315, 393, 474
BstX2I	RGATCY	2 cut(s)	2208, 2665
BstXI	CCANNNNNNTGG	1 cut(s)	1745
BstYI	RGATCY	2 cut(s)	2208, 2665
BstZI	CGGCCG	1 cut(s)	31
Bsu36I	CCTNAGG	2 cut(s)	918, 1608
BtrI	CACGTC	1 cut(s)	151
BtsCI	GGATG	5 cut(s)	1989, 2404, 2899, 3074, 3142
BtsI	GCAGTG	3 cut(s)	272, 434, 2246
Cac8I	GCNNGC	6 cut(s)	449, 1247, 1915, 2371, 2469, 2867
CaiI	CAGNNNCTG	1 cut(s)	2786
CciI	TCATGA	1 cut(s)	1942
CfoI	GCGC	1 cut(s)	1245
Cfr10I	RCCGGY	2 cut(s)	472, 2346
Cfr13I	GGNCC	7 cut(s)	1199, 1715, 1796, 1975, 2143, 2268, 2372
CseI	GACGC	3 cut(s)	533, 2071, 2245
CspCI	CAANNNNNGTGG	2 cut(s)	1788, 1823
DraI	TTTAAA	1 cut(s)	1293
DraIII	CACNNNGTG	1 cut(s)	2010
DrdI	GACNNNNNNGTC	1 cut(s)	1223
DriI	GACNNNNNGTC	1 cut(s)	1362
DseDI	GACNNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	5 cut(s)	31, 286, 1096, 1447, 2259
EagI	CGGCCG	1 cut(s)	31
Eam1104I	CTCTTC	9 cut(s)	7, 67, 199, 373, 1309, 2031, 2065, 2649, 2666
Eam1105I	GACNNNNNGTC	1 cut(s)	1362
EarI	CTCTTC	9 cut(s)	7, 67, 199, 373, 1309, 2031, 2065, 2649, 2666
EciI	GGCGGA	3 cut(s)	93, 564, 2976
Ecl136II	GAGCTC	1 cut(s)	976
EclXI	CGGCCG	1 cut(s)	31
Eco130I	CCWWGG	4 cut(s)	392, 1138, 1792, 2854
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	1 cut(s)	2062
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	3 cut(s)	1199, 1715, 1975
Eco52I	CGGCCG	1 cut(s)	31
Eco53kI	GAGCTC	1 cut(s)	976
Eco57I	CTGAAG	3 cut(s)	2222, 2321, 2690
Eco81I	CCTNAGG	2 cut(s)	918, 1608
EcoICRI	GAGCTC	1 cut(s)	976
EcoNI	CCTNNNNNAGG	2 cut(s)	1142, 2956
EcoO109I	RGGNCCY	1 cut(s)	1199
EcoRII	CCWGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	4 cut(s)	392, 1138, 1792, 2854
EcoT38I	GRGCYC	1 cut(s)	978
ErhI	CCWWGG	4 cut(s)	392, 1138, 1792, 2854
Esp3I	CGTCTC	1 cut(s)	610
FalI	AAGNNNNNCTT	8 cut(s)	854, 886, 986, 1018, 1174, 1206, 2132, 2164
FaqI	GGGAC	4 cut(s)	1430, 1979, 2872, 3066
FauI	CCCGC	2 cut(s)	2361, 3043
FauNDI	CATATG	1 cut(s)	850
FbaI	TGATCA	4 cut(s)	304, 340, 625, 1945
FokI	GGATG	5 cut(s)	1976, 2391, 2906, 3061, 3149
FriOI	GRGCYC	1 cut(s)	978
FspBI	CTAG	5 cut(s)	1461, 1877, 2079, 2175, 2663
GlaI	GCGC	1 cut(s)	1244
GsaI	CCCAGC	2 cut(s)	1817, 1921
GsuI	CTGGAG	4 cut(s)	558, 915, 2763, 3045
HapII	CCGG	4 cut(s)	467, 473, 2347, 2591
HgaI	GACGC	3 cut(s)	533, 2071, 2245
HhaI	GCGC	1 cut(s)	1245
Hin6I	GCGC	1 cut(s)	1243
HinP1I	GCGC	1 cut(s)	1243
HincII	GTYRAC	6 cut(s)	242, 410, 1759, 1852, 2086, 3163
HindII	GTYRAC	6 cut(s)	242, 410, 1759, 1852, 2086, 3163
HindIII	AAGCTT	2 cut(s)	980, 2315
HpaII	CCGG	4 cut(s)	467, 473, 2347, 2591
HphI	GGTGA	3 cut(s)	206, 869, 1846
HpyCH4IV	ACGT	3 cut(s)	150, 2397, 2764
HpySE526I	ACGT	3 cut(s)	150, 2397, 2764
HspAI	GCGC	1 cut(s)	1243
Ksp22I	TGATCA	4 cut(s)	304, 340, 625, 1945
LguI	GCTCTTC	1 cut(s)	2031
LmnI	GCTCC	4 cut(s)	421, 1612, 2355, 2551
LweI	GCATC	3 cut(s)	1618, 2743, 3101
MaeI	CTAG	5 cut(s)	1461, 1877, 2079, 2175, 2663
MaeII	ACGT	3 cut(s)	150, 2397, 2764
MbiI	CCGCTC	1 cut(s)	2356
MflI	RGATCY	2 cut(s)	2208, 2665
MhlI	GDGCHC	4 cut(s)	978, 2811, 2901, 2966
MlsI	TGGCCA	2 cut(s)	1449, 2261
MluNI	TGGCCA	2 cut(s)	1449, 2261
MlyI	GAGTC	5 cut(s)	141, 442, 1351, 2212, 2502
MmeI	TCCRAC	6 cut(s)	527, 1391, 1551, 2521, 2726, 2937
Mox20I	TGGCCA	2 cut(s)	1449, 2261
MscI	TGGCCA	2 cut(s)	1449, 2261
MseI	TTAA	9 cut(s)	723, 903, 1004, 1122, 1181, 1292, 1334, 2115, 2400
MslI	CAYNNNNRTG	4 cut(s)	678, 717, 1766, 2880
Msp20I	TGGCCA	2 cut(s)	1449, 2261
MspA1I	CMGCKG	2 cut(s)	1015, 2444
MspCI	CTTAAG	1 cut(s)	1003
MspI	CCGG	4 cut(s)	467, 473, 2347, 2591
MspR9I	CCNGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
Mva1269I	GAATGC	2 cut(s)	745, 1414
MvaI	CCWGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
MvnI	CGCG	1 cut(s)	285
NdeI	CATATG	1 cut(s)	850
NmeAIII	GCCGAG	2 cut(s)	1057, 2722
NmuCI	GTSAC	8 cut(s)	880, 952, 1354, 1834, 1865, 2233, 2273, 2840
NspI	RCATGY	2 cut(s)	1249, 3161
PaeI	GCATGC	1 cut(s)	1249
PagI	TCATGA	1 cut(s)	1942
PasI	CCCWGGG	1 cut(s)	1195
PciSI	GCTCTTC	1 cut(s)	2031
PctI	GAATGC	2 cut(s)	745, 1414
PfeI	GAWTC	7 cut(s)	280, 439, 1069, 1087, 1873, 2476, 2561
PfoI	TCCNGGA	1 cut(s)	2779
PleI	GAGTC	5 cut(s)	140, 441, 1351, 2212, 2501
PpsI	GAGTC	5 cut(s)	140, 441, 1351, 2212, 2501
PpuMI	RGGWCCY	1 cut(s)	1199
Psp124BI	GAGCTC	1 cut(s)	978
Psp5II	RGGWCCY	1 cut(s)	1199
Psp6I	CCWGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
PspFI	CCCAGC	2 cut(s)	1813, 1917
PspGI	CCWGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
PspPI	GGNCC	7 cut(s)	1199, 1715, 1796, 1975, 2143, 2268, 2372
PspPPI	RGGWCCY	1 cut(s)	1199
PstI	CTGCAG	1 cut(s)	2840
PstNI	CAGNNNCTG	1 cut(s)	2786
PsuI	RGATCY	2 cut(s)	2208, 2665
PvuII	CAGCTG	2 cut(s)	1015, 2444
RseI	CAYNNNNRTG	4 cut(s)	678, 717, 1766, 2880
SacI	GAGCTC	1 cut(s)	978
SapI	GCTCTTC	1 cut(s)	2031
SaqAI	TTAA	9 cut(s)	723, 903, 1004, 1122, 1181, 1292, 1334, 2115, 2400
Sau96I	GGNCC	7 cut(s)	1199, 1715, 1796, 1975, 2143, 2268, 2372
ScaI	AGTACT	2 cut(s)	703, 1001
SchI	GAGTC	5 cut(s)	141, 442, 1351, 2212, 2502
ScrFI	CCNGG	8 cut(s)	1196, 1451, 1668, 2187, 2266, 2781, 3063, 3167
SduI	GDGCHC	4 cut(s)	978, 2811, 2901, 2966
SfaNI	GCATC	3 cut(s)	1618, 2743, 3101
SfcI	CTRYAG	2 cut(s)	2836, 3016
SinI	GGWCC	3 cut(s)	1199, 1715, 1975
SmiMI	CAYNNNNRTG	4 cut(s)	678, 717, 1766, 2880
SmlI	CTYRAG	2 cut(s)	977, 1003
SmoI	CTYRAG	2 cut(s)	977, 1003
SphI	GCATGC	1 cut(s)	1249
SspMI	CTAG	5 cut(s)	1461, 1877, 2079, 2175, 2663
SstI	GAGCTC	1 cut(s)	978
StyD4I	CCNGG	8 cut(s)	1194, 1449, 1666, 2185, 2264, 2779, 3061, 3165
StyI	CCWWGG	4 cut(s)	392, 1138, 1792, 2854
TaiI	ACGT	3 cut(s)	153, 2400, 2767
TaqI	TCGA	3 cut(s)	178, 442, 2528
TatI	WGTACW	4 cut(s)	701, 999, 1512, 2994
TauI	GCSGC	8 cut(s)	21, 33, 42, 288, 337, 1101, 2414, 2734
TfiI	GAWTC	7 cut(s)	280, 439, 1069, 1087, 1873, 2476, 2561
Tru1I	TTAA	9 cut(s)	723, 903, 1004, 1122, 1181, 1292, 1334, 2115, 2400
Tru9I	TTAA	9 cut(s)	723, 903, 1004, 1122, 1181, 1292, 1334, 2115, 2400
TseFI	GTSAC	8 cut(s)	880, 952, 1354, 1834, 1865, 2233, 2273, 2840
Tsp45I	GTSAC	8 cut(s)	880, 952, 1354, 1834, 1865, 2233, 2273, 2840
TspGWI	ACGGA	4 cut(s)	81, 573, 822, 3058
Vha464I	CTTAAG	1 cut(s)	1003
VneI	GTGCAC	2 cut(s)	2807, 2962
VpaK11BI	GGWCC	3 cut(s)	1199, 1715, 1975
XagI	CCTNNNNNAGG	2 cut(s)	1142, 2956
XapI	RAATTY	6 cut(s)	555, 827, 1118, 1282, 1574, 2530
XbaI	TCTAGA	1 cut(s)	2174
XceI	RCATGY	2 cut(s)	1249, 3161
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1914
XspI	CTAG	5 cut(s)	1461, 1877, 2079, 2175, 2663
ZrmI	AGTACT	2 cut(s)	703, 1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.