Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Reverse (-)

15417871 .. 15421893

Gene Structure 4023 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032457

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3141 bp

ATGGAAAGAGGAAGAGGCGGCGGTTACGGTGGCAGAGGGAACAACGGAGGAAGAGGCGGAGGAGAGAGAGGGAGAGGCGGTTATGGTAACAGAGGAGGGAGAGTTGGCGGGTATGCTGACGTGGTTTACGGCGGTGGGAATGGCGGTCGAGGAGGAGGTGAGAGAGGAAGAGGCGGTTATGGCGGTGGTGGTTACAACCGTCAACAACCGCCGCAGCAAGATCAGCAGTGGAATAATCAGAATCAGAATCGCGGCAGGTCTGATCAGCAAACTTGGAGGCCTTCTTCTCAGCCGCAAGATCAGCAGTCGGGGAGGTATTCGGCCTCTTCTCAACCGCAGGATCAGCAGCCTTGGAGGTCTTCTGGTCAACTGCCGCCACAGGAGCAGCAGTGGAGTCAGAATCGAGGCCAGCCTTGGAGGACGGCCCCGGCACCGGCACCGGCACCGTCTTCTTCTTCATCTCCTTCTCCAACCAAGAACAGTCTTGCTGACACTGTTATTTCTGGAGTGCAATCACTGAAAGTTTCAACGCAGACAGCTTCTCCATCTTCGTTGAACAGTGCAAACAGACATCTGCCTGTGAGACGACCTGATAACGGAGGCACAAAGGCTATTCAAACTGTCAGGCTTCGTGCTAATCACTTCAATGTTTCGTACAATCCTCAGAGTACCATAATGCACTATGATGTTAATGTCAAGCCAGTGAATGCTACAAGGAATGGCAGACCGGTTAGAATTATGAAGTCTGATCTTGTTGCAATTAGAAACAAGTTGTCCTCTGATAATCCTTCAAAATTTCCATTATTGATGACTGCATATGATGGTGAGAAGAATATTTTCAGTGCTGTGACATTACCCACTGGAGAGTTTAAGGTGGAGGTTCCTGAGGAAGAAGGCACACGCTTAAGTTCTTATATAGTTACTATAAAACTTGTAAATGAGCTCAAGCTTTGCAAGCTGAAGGAGTACTTAAGTGGGCAGCTGTTGTCTATCCCTCGTGATATATTGCAGGGGATGGATTTAGTGATGAAGGAGAATCCTACTCGGCGGTTAATTCCTGTTGGCCGCAGCTTTTACCCTGCTGAATTTAATCCAGACGATGACCTTGGACAGGGTACTGCTGCATTTAGAGGGTCTCAGCATAGTATAAGGCTCACTTCCCAGGGTCCTGTTATGTGTCTGGACTACTCAGTCTTGGCATTTTATAAGCGCATGCCAGTTATAGATTTTCTCCATGAAAAGATAAGGGGTTTTACTTTAAATAATTTCAGGAGGTTTAGGAGAGATGTTGAGAATGTTTTAAGGGGTTTGAAAGTTACCGTGACTCATCGTCCAACCAAGCAGAAGTATGTAATCAAGGGGCTAACTGATATGAATGCAGGGGACATTACATTTGAAGCTGTTGATGTTGATGGCCAGGTTCCACCTAGAAGGCTTAGACTTGTTGATTATTTCAGAGACAAATACAAGGATATAAAGTACAAAGACATTCCTTGCTTGGATTTGGGGAAAAATGGTAGGAGGAATGATACACCGTTGGAATTTTGTGTCTTAGTTGAAGGGCAAAGGTACCCTAAGGAGCAGTTGGGCAGAGATGAAGCCATTATGCTGAAGAACTTGTCATTGGTTGCACCAGGGGTTAGAGAGAGCAACATACGCAACATGGTACGGTCAGGAGATGGACCTTGTGGTGGCGGCATTATCCAGAACTTTGGAATTGAAGTCAACATGAATATGACACAAGTAACAGGGCGTGTCATTGGCCCACCTGAATTGAAGCTGGGGGCTTTTGGTGGCAAGTTGACTAAGATAACAGTTGACAATGTGAAATGTCATTGGAATTTAGTTGGTAAGTCTTTAGTGGAAGGAAAACCAATAGCTCGCTGGGCTGTGCTTGACTTTAGCTGTTATGATCGGGACAGACTGGACCCTGATCAATTCATCCCAAAGCTCATCACTCGGTGCAACAAATTGGGAATGAGAATGGAAGAGCCTCGCTTGTATGAAACCTCTTCCATGAGACCATTTTCTAGTGTCAACTTGCTTCGGGAACTGCTTGAAACTGTTAATGGGAAGGTACTTCAAGAAGGCAAGGGCCACTTACAACTACTTGTTTGTGTAATGTCTAGAAAAGACCCTGGTTACAAGTATCTGAAGTGGATCTGTGAGACTCAAATTGGTATAGTGACGCAGTGCTGTTTGTCAAAGATGGCCACCAGGCCCAGTGATCAGTTTCTTGCAAATCTTGCACTGAAGATCAATGCGAAGCTTGGAGGCAGTAATGTAGAGCTGGTTGACCGGCTCCCACTCTTTGAGGGTGCTGGCCCTGTTATGTTTGTGGGGGCTGACGTTAATCATCCTGCGGCTCGGAACACAACAAGTCCATCAATAGCAGCTGTGGTTGCCACTATAAACTGGCCTGCTGTGAATCGTTATGCTGCACGAGTTCGACCCCAGTATCATCGTACTGAGAGCATATCAAATTTTGGAGACATGGTTTTGGAGCTTGTTGAATCATATTCTAGAATAAATAAAGTGAAGCCTGAAAAAATTGTTGTTTTCCGAGATGGTGTAAGTGAGGGGCAATTTGATATGGTTCTCAATGAAGAGTTACTAGATCTGAAGAGGGCTTTGGGAACTATAAACTACTTTCCAACCATCACTCTGATTGTTGCTCAAAAGCGGCATCATACCCGGCTGTTTCAGGAGAATGGGAGTTCCAATGTATCTCCAGGAACTGTTGTGGACACAAGGATCGTGCACCCATTTGAGTTTGACTTCTATCTCTGCAGTCACTATGGAAGCCTTGGGACAAGCAAGCCGACACACTACTATGTACTTTGGGATGAGCACAGTTTTACTTCCGACCAGTTGCAGAAGCTCATATATGACTTGTGCTTTACCTTTGCAAGGTGCACCAAACCTGTCTCTTTGGTTCCGCCAGTGTACTATGCTGACCTTGTGGCCTACAGAGGGAGATTGTACCATGAGACTGTGACCGAGGGACTGTCTCCAGGTTCCGTGACATCCTCCTCCTCCTCAGCATCATCATCGGCATCTTCAACACTGTCAGTGGGTTCTCGGGATGAAAGGTTTTATAGATTGCATGCTGACCTGGAAAACATTATGTTTTTCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1047

Amino Acids

116.42

Weight (kDa)

9.48

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	207 - 343	3.5e-23	N-terminal domain of argonaute
ArgoL1	PF08699	353 - 403	8.4e-11	Argonaute linker 1 domain
PAZ	PF02170	423 - 529	7.3e-21	PAZ domain
ArgoL2	PF16488	548 - 593	6.4e-07	Argonaute linker 2 domain
Piwi	PF02171	704 - 993	1.9e-93	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1206
AasI	GACNNNNNNGTC	1 cut(s)	1190
Acc36I	ACCTGC	1 cut(s)	246
Acc65I	GGTACC	1 cut(s)	1569
AccB1I	GGYRCC	4 cut(s)	430, 436, 442, 1569
AccII	CGCG	1 cut(s)	252
AclWI	GGATC	3 cut(s)	348, 2168, 2762
AcoI	YGGCCR	3 cut(s)	1063, 1414, 2211
AcsI	RAATTY	5 cut(s)	794, 1085, 1541, 1840, 2482
AcuI	CTGAAG	5 cut(s)	980, 1631, 2174, 2273, 2642
AdeI	CACNNNGTG	1 cut(s)	1962
AfiI	CCNNNNNNNGG	6 cut(s)	433, 596, 1111, 1691, 2910, 2973
AflII	CTTAAG	2 cut(s)	904, 970
AgeI	ACCGGT	1 cut(s)	727
AhdI	GACNNNNNGTC	1 cut(s)	1329
AjiI	CACGTC	1 cut(s)	121
AjnI	CCWGG	8 cut(s)	1161, 1416, 1633, 2137, 2216, 2731, 3013, 3114
AjuI	GAANNNNNNNTTGG	4 cut(s)	1607, 1639, 2615, 2647
Alw21I	GWGCWC	4 cut(s)	945, 2763, 2853, 2918
Alw26I	GTCTC	9 cut(s)	577, 1140, 1452, 2014, 2162, 2484, 2932, 2984, 3015
Alw44I	GTGCAC	2 cut(s)	2759, 2914
AlwI	GGATC	3 cut(s)	348, 2168, 2762
AlwNI	CAGNNNCTG	1 cut(s)	2738
Ama87I	CYCGRG	1 cut(s)	3081
ApaLI	GTGCAC	2 cut(s)	2759, 2914
ApeKI	GCWGC	8 cut(s)	214, 346, 385, 979, 1068, 1121, 2393, 2438
ApoI	RAATTY	5 cut(s)	794, 1085, 1541, 1840, 2482
ArsI	GACNNNNNNTTYG	2 cut(s)	1376, 1408
AsiGI	ACCGGT	1 cut(s)	727
Asp700I	GAANNNNTTC	1 cut(s)	836
Asp718I	GGTACC	1 cut(s)	1569
AspLEI	GCGC	1 cut(s)	1212
AspS9I	GGNCC	8 cut(s)	424, 1166, 1682, 1763, 1927, 2095, 2220, 2324
AsuC2I	CCSGG	2 cut(s)	428, 2695
AsuHPI	GGTGA	2 cut(s)	170, 836
AvaI	CYCGRG	1 cut(s)	3081
AvaII	GGWCC	3 cut(s)	1166, 1682, 1927
AxyI	CCTNAGG	2 cut(s)	885, 1575
BaeGI	GKGCMC	2 cut(s)	2763, 2918
BaeI	ACNNNNGTAYC	2 cut(s)	2441, 2474
BalI	TGGCCA	2 cut(s)	1416, 2213
BanI	GGYRCC	4 cut(s)	430, 436, 442, 1569
BanII	GRGCYC	1 cut(s)	945
BauI	CACGAG	2 cut(s)	996, 2442
BbsI	GAAGAC	2 cut(s)	351, 441
Bbv12I	GWGCWC	4 cut(s)	945, 2763, 2853, 2918
BbvCI	CCTCAGC	1 cut(s)	3040
BbvI	GCAGC	8 cut(s)	226, 358, 397, 991, 1080, 1108, 2405, 2425
BccI	CCATC	9 cut(s)	553, 815, 1009, 1406, 1673, 2203, 2392, 2561, 2666
BceAI	ACGGC	2 cut(s)	145, 438
BcgI	CGANNNNNNTGC	2 cut(s)	3033, 3067
BciT130I	CCWGG	8 cut(s)	1163, 1418, 1635, 2139, 2218, 2733, 3015, 3116
BclI	TGATCA	3 cut(s)	262, 1933, 2227
BcnI	CCSGG	2 cut(s)	428, 2695
BcoDI	GTCTC	9 cut(s)	577, 1140, 1452, 2014, 2162, 2484, 2932, 2984, 3015
BfaI	CTAG	5 cut(s)	1428, 2031, 2127, 2523, 2615
BfmI	CTRYAG	2 cut(s)	2788, 2968
BfrI	CTTAAG	2 cut(s)	904, 970
BfuAI	ACCTGC	1 cut(s)	246
BglII	AGATCT	1 cut(s)	2617
BmcAI	AGTACT	1 cut(s)	968
Bme18I	GGWCC	3 cut(s)	1166, 1682, 1927
BmeRI	GACNNNNNGTC	1 cut(s)	1329
BmeT110I	CYCGRG	1 cut(s)	3081
BmgBI	CACGTC	1 cut(s)	121
BmgT120I	GGNCC	8 cut(s)	424, 1166, 1682, 1763, 1927, 2095, 2220, 2324
BmrI	ACTGGG	2 cut(s)	2217, 2449
BmsI	GCATC	3 cut(s)	2695, 3053, 3065
BmuI	ACTGGG	2 cut(s)	2217, 2449
BpiI	GAAGAC	2 cut(s)	351, 441
BpmI	CTGGAG	4 cut(s)	525, 882, 2715, 2997
Bpu10I	CCTNAGC	1 cut(s)	3040
BpuEI	CTTGAG	1 cut(s)	929
BpuMI	CCSGG	2 cut(s)	428, 2695
BsaI	GGTCTC	2 cut(s)	1140, 2014
BsaWI	WCCGGW	1 cut(s)	727
Bsc4I	CCNNNNNNNGG	6 cut(s)	433, 596, 1111, 1691, 2910, 2973
Bse118I	RCCGGY	4 cut(s)	433, 439, 727, 2298
Bse1I	ACTGG	9 cut(s)	701, 865, 1217, 1929, 2223, 2420, 2455, 2869, 2942
Bse21I	CCTNAGG	2 cut(s)	885, 1575
BseBI	CCWGG	8 cut(s)	1163, 1418, 1635, 2139, 2218, 2733, 3015, 3116
BseGI	GGATG	6 cut(s)	1020, 1941, 2356, 2851, 3026, 3091
BseLI	CCNNNNNNNGG	6 cut(s)	433, 596, 1111, 1691, 2910, 2973
BseMII	CTCAG	7 cut(s)	302, 677, 876, 1151, 1203, 2460, 3054
BseNI	ACTGG	9 cut(s)	701, 865, 1217, 1929, 2223, 2420, 2455, 2869, 2942
BseRI	GAGGAG	7 cut(s)	75, 108, 165, 168, 3022, 3025, 3028
BseSI	GKGCMC	2 cut(s)	2763, 2918
BseXI	GCAGC	8 cut(s)	226, 358, 397, 991, 1080, 1108, 2405, 2425
BseYI	CCCAGC	2 cut(s)	1780, 1884
BsgI	GTGCAG	1 cut(s)	2424
Bsh1236I	CGCG	1 cut(s)	252
Bsh1285I	CGRYCG	1 cut(s)	148
BshNI	GGYRCC	4 cut(s)	430, 436, 442, 1569
BshTI	ACCGGT	1 cut(s)	727
BsiEI	CGRYCG	1 cut(s)	148
BsiHKAI	GWGCWC	4 cut(s)	945, 2763, 2853, 2918
BsiHKCI	CYCGRG	1 cut(s)	3081
BsiSI	CCGG	6 cut(s)	428, 434, 440, 728, 2299, 2695
BslFI	GGGAC	4 cut(s)	1397, 1931, 2824, 3018
BslI	CCNNNNNNNGG	6 cut(s)	433, 596, 1111, 1691, 2910, 2973
BsmAI	GTCTC	9 cut(s)	577, 1140, 1452, 2014, 2162, 2484, 2932, 2984, 3015
BsmBI	CGTCTC	1 cut(s)	577
BsmFI	GGGAC	4 cut(s)	1397, 1931, 2824, 3018
BsmI	GAATGC	2 cut(s)	712, 1381
Bso31I	GGTCTC	2 cut(s)	1140, 2014
BsoBI	CYCGRG	1 cut(s)	3081
Bsp1286I	GDGCHC	4 cut(s)	945, 2763, 2853, 2918
BspCNI	CTCAG	7 cut(s)	301, 676, 877, 1150, 1202, 2461, 3053
BspFNI	CGCG	1 cut(s)	252
BspMAI	CTGCAG	1 cut(s)	2792
BspMI	ACCTGC	1 cut(s)	246
BspPI	GGATC	3 cut(s)	348, 2168, 2762
BspQI	GCTCTTC	1 cut(s)	1983
BspT107I	GGYRCC	4 cut(s)	430, 436, 442, 1569
BspTI	CTTAAG	2 cut(s)	904, 970
BspTNI	GGTCTC	2 cut(s)	1140, 2014
BsrFI	RCCGGY	4 cut(s)	433, 439, 727, 2298
BsrI	ACTGG	9 cut(s)	701, 865, 1217, 1929, 2223, 2420, 2455, 2869, 2942
BssAI	RCCGGY	4 cut(s)	433, 439, 727, 2298
BssSI	CACGAG	2 cut(s)	996, 2442
BssT1I	CCWWGG	4 cut(s)	350, 413, 1105, 2806
Bst2BI	CACGAG	2 cut(s)	996, 2442
Bst2UI	CCWGG	8 cut(s)	1163, 1418, 1635, 2139, 2218, 2733, 3015, 3116
Bst6I	CTCTTC	8 cut(s)	7, 46, 163, 331, 1983, 2017, 2601, 2618
BstAFI	CTTAAG	2 cut(s)	904, 970
BstAPI	GCANNNNNTGC	1 cut(s)	2246
BstC8I	GCNNGC	8 cut(s)	410, 956, 1214, 1882, 2323, 2421, 2819, 3108
BstENI	CCTNNNNNAGG	2 cut(s)	1109, 2908
BstF5I	GGATG	6 cut(s)	1020, 1941, 2356, 2851, 3026, 3091
BstFNI	CGCG	1 cut(s)	252
BstHHI	GCGC	1 cut(s)	1212
BstMAI	GTCTC	9 cut(s)	577, 1140, 1452, 2014, 2162, 2484, 2932, 2984, 3015
BstMCI	CGRYCG	1 cut(s)	148
BstNI	CCWGG	8 cut(s)	1163, 1418, 1635, 2139, 2218, 2733, 3015, 3116
BstNSI	RCATGY	2 cut(s)	1216, 3110
BstSFI	CTRYAG	2 cut(s)	2788, 2968
BstSLI	GKGCMC	2 cut(s)	2763, 2918
BstUI	CGCG	1 cut(s)	252
BstV1I	GCAGC	8 cut(s)	226, 358, 397, 991, 1080, 1108, 2405, 2425
BstV2I	GAAGAC	2 cut(s)	351, 441
BstX2I	RGATCY	2 cut(s)	2160, 2617
BstXI	CCANNNNNNTGG	1 cut(s)	1712
BstYI	RGATCY	2 cut(s)	2160, 2617
Bsu36I	CCTNAGG	2 cut(s)	885, 1575
BtrI	CACGTC	1 cut(s)	121
BtsCI	GGATG	6 cut(s)	1020, 1941, 2356, 2851, 3026, 3091
BtsI	GCAGTG	3 cut(s)	233, 395, 2198
BveI	ACCTGC	1 cut(s)	246
Cac8I	GCNNGC	8 cut(s)	410, 956, 1214, 1882, 2323, 2421, 2819, 3108
CaiI	CAGNNNCTG	1 cut(s)	2738
CfoI	GCGC	1 cut(s)	1212
Cfr10I	RCCGGY	4 cut(s)	433, 439, 727, 2298
Cfr13I	GGNCC	8 cut(s)	424, 1166, 1682, 1763, 1927, 2095, 2220, 2324
CseI	GACGC	1 cut(s)	2197
CspAI	ACCGGT	1 cut(s)	727
CspCI	CAANNNNNGTGG	2 cut(s)	1755, 1790
CviAII	CATG	8 cut(s)	1213, 1235, 1663, 1729, 2017, 2494, 2987, 3107
DraI	TTTAAA	1 cut(s)	1260
DraIII	CACNNNGTG	1 cut(s)	1962
DrdI	GACNNNNNNGTC	1 cut(s)	1190
DriI	GACNNNNNGTC	1 cut(s)	1329
DseDI	GACNNNNNNGTC	1 cut(s)	1190
EaeI	YGGCCR	3 cut(s)	1063, 1414, 2211
Eam1104I	CTCTTC	8 cut(s)	7, 46, 163, 331, 1983, 2017, 2601, 2618
Eam1105I	GACNNNNNGTC	1 cut(s)	1329
EarI	CTCTTC	8 cut(s)	7, 46, 163, 331, 1983, 2017, 2601, 2618
EciI	GGCGGA	2 cut(s)	72, 2928
Ecl136II	GAGCTC	1 cut(s)	943
Eco130I	CCWWGG	4 cut(s)	350, 413, 1105, 2806
Eco147I	AGGCCT	1 cut(s)	280
Eco24I	GRGCYC	1 cut(s)	945
Eco31I	GGTCTC	2 cut(s)	1140, 2014
Eco47I	GGWCC	3 cut(s)	1166, 1682, 1927
Eco53kI	GAGCTC	1 cut(s)	943
Eco57I	CTGAAG	5 cut(s)	980, 1631, 2174, 2273, 2642
Eco81I	CCTNAGG	2 cut(s)	885, 1575
Eco88I	CYCGRG	1 cut(s)	3081
EcoICRI	GAGCTC	1 cut(s)	943
EcoNI	CCTNNNNNAGG	2 cut(s)	1109, 2908
EcoO109I	RGGNCCY	1 cut(s)	1166
EcoRII	CCWGG	8 cut(s)	1161, 1416, 1633, 2137, 2216, 2731, 3013, 3114
EcoT14I	CCWWGG	4 cut(s)	350, 413, 1105, 2806
EcoT38I	GRGCYC	1 cut(s)	945
ErhI	CCWWGG	4 cut(s)	350, 413, 1105, 2806
Esp3I	CGTCTC	1 cut(s)	577
FaeI	CATG	8 cut(s)	1216, 1238, 1666, 1732, 2020, 2497, 2990, 3110
FalI	AAGNNNNNCTT	6 cut(s)	953, 985, 1141, 1173, 2084, 2116
FaqI	GGGAC	4 cut(s)	1397, 1931, 2824, 3018
FatI	CATG	8 cut(s)	1212, 1234, 1662, 1728, 2016, 2493, 2986, 3106
FauI	CCCGC	1 cut(s)	101
FauNDI	CATATG	1 cut(s)	817
FbaI	TGATCA	3 cut(s)	262, 1933, 2227
FokI	GGATG	6 cut(s)	1027, 1928, 2343, 2858, 3013, 3098
FriOI	GRGCYC	1 cut(s)	945
FspBI	CTAG	5 cut(s)	1428, 2031, 2127, 2523, 2615
GlaI	GCGC	1 cut(s)	1211
GsaI	CCCAGC	2 cut(s)	1784, 1888
GsuI	CTGGAG	4 cut(s)	525, 882, 2715, 2997
HapII	CCGG	6 cut(s)	428, 434, 440, 728, 2299, 2695
HgaI	GACGC	1 cut(s)	2197
HhaI	GCGC	1 cut(s)	1212
Hin1II	CATG	8 cut(s)	1216, 1238, 1666, 1732, 2020, 2497, 2990, 3110
Hin6I	GCGC	1 cut(s)	1210
HinP1I	GCGC	1 cut(s)	1210
HincII	GTYRAC	7 cut(s)	203, 368, 1726, 1803, 1819, 2038, 2296
HindII	GTYRAC	7 cut(s)	203, 368, 1726, 1803, 1819, 2038, 2296
HindIII	AAGCTT	2 cut(s)	947, 2267
HinfI	GANTC	9 cut(s)	241, 247, 394, 400, 1036, 1324, 2170, 2428, 2513
HpaII	CCGG	6 cut(s)	428, 434, 440, 728, 2299, 2695
HphI	GGTGA	2 cut(s)	170, 836
HpyCH4IV	ACGT	2 cut(s)	120, 2349
HpySE526I	ACGT	2 cut(s)	120, 2349
Hsp92II	CATG	8 cut(s)	1216, 1238, 1666, 1732, 2020, 2497, 2990, 3110
HspAI	GCGC	1 cut(s)	1210
KpnI	GGTACC	1 cut(s)	1573
Ksp22I	TGATCA	3 cut(s)	262, 1933, 2227
LguI	GCTCTTC	1 cut(s)	1983
LmnI	GCTCC	4 cut(s)	382, 1579, 2307, 2503
Lsp1109I	GCAGC	8 cut(s)	226, 358, 397, 991, 1080, 1108, 2405, 2425
LweI	GCATC	3 cut(s)	2695, 3053, 3065
MaeI	CTAG	5 cut(s)	1428, 2031, 2127, 2523, 2615
MaeII	ACGT	2 cut(s)	120, 2349
MflI	RGATCY	2 cut(s)	2160, 2617
MhlI	GDGCHC	4 cut(s)	945, 2763, 2853, 2918
MlsI	TGGCCA	2 cut(s)	1416, 2213
MluNI	TGGCCA	2 cut(s)	1416, 2213
MlyI	GAGTC	3 cut(s)	403, 1318, 2164
MmeI	TCCRAC	5 cut(s)	494, 1358, 1518, 2678, 2889
Mox20I	TGGCCA	2 cut(s)	1416, 2213
MroXI	GAANNNNTTC	1 cut(s)	836
MscI	TGGCCA	2 cut(s)	1416, 2213
MslI	CAYNNNNRTG	4 cut(s)	645, 684, 1733, 2832
Msp20I	TGGCCA	2 cut(s)	1416, 2213
MspA1I	CMGCKG	2 cut(s)	982, 2396
MspCI	CTTAAG	2 cut(s)	904, 970
MspI	CCGG	6 cut(s)	428, 434, 440, 728, 2299, 2695
Mva1269I	GAATGC	2 cut(s)	712, 1381
MvaI	CCWGG	8 cut(s)	1163, 1418, 1635, 2139, 2218, 2733, 3015, 3116
MvnI	CGCG	1 cut(s)	252
NciI	CCSGG	2 cut(s)	428, 2695
NdeI	CATATG	1 cut(s)	817
NlaIII	CATG	8 cut(s)	1216, 1238, 1666, 1732, 2020, 2497, 2990, 3110
NmeAIII	GCCGAG	1 cut(s)	1024
NmuCI	GTSAC	6 cut(s)	847, 1321, 2185, 2792, 2995, 3022
NspI	RCATGY	2 cut(s)	1216, 3110
PaeI	GCATGC	2 cut(s)	1216, 3110
PasI	CCCWGGG	1 cut(s)	1162
PceI	AGGCCT	1 cut(s)	280
PciSI	GCTCTTC	1 cut(s)	1983
PctI	GAATGC	2 cut(s)	712, 1381
PdmI	GAANNNNTTC	1 cut(s)	836
PfeI	GAWTC	6 cut(s)	241, 247, 400, 1036, 2428, 2513
PfoI	TCCNGGA	1 cut(s)	2731
PinAI	ACCGGT	1 cut(s)	727
PleI	GAGTC	3 cut(s)	402, 1318, 2164
PpsI	GAGTC	3 cut(s)	402, 1318, 2164
PpuMI	RGGWCCY	1 cut(s)	1166
PsiI	TTATAA	1 cut(s)	1206
Psp124BI	GAGCTC	1 cut(s)	945
Psp5II	RGGWCCY	1 cut(s)	1166
Psp6I	CCWGG	8 cut(s)	1161, 1416, 1633, 2137, 2216, 2731, 3013, 3114
PspFI	CCCAGC	2 cut(s)	1780, 1884
PspGI	CCWGG	8 cut(s)	1161, 1416, 1633, 2137, 2216, 2731, 3013, 3114
PspPI	GGNCC	8 cut(s)	424, 1166, 1682, 1763, 1927, 2095, 2220, 2324
PspPPI	RGGWCCY	1 cut(s)	1166
PstI	CTGCAG	1 cut(s)	2792
PstNI	CAGNNNCTG	1 cut(s)	2738
PsuI	RGATCY	2 cut(s)	2160, 2617
PvuII	CAGCTG	2 cut(s)	982, 2396
RseI	CAYNNNNRTG	4 cut(s)	645, 684, 1733, 2832
SacI	GAGCTC	1 cut(s)	945
SapI	GCTCTTC	1 cut(s)	1983
Sau96I	GGNCC	8 cut(s)	424, 1166, 1682, 1763, 1927, 2095, 2220, 2324
ScaI	AGTACT	1 cut(s)	968
SchI	GAGTC	3 cut(s)	403, 1318, 2164
SduI	GDGCHC	4 cut(s)	945, 2763, 2853, 2918
SfaNI	GCATC	3 cut(s)	2695, 3053, 3065
SfcI	CTRYAG	2 cut(s)	2788, 2968
SinI	GGWCC	3 cut(s)	1166, 1682, 1927
SmiMI	CAYNNNNRTG	4 cut(s)	645, 684, 1733, 2832
SmlI	CTYRAG	3 cut(s)	904, 944, 970
SmoI	CTYRAG	3 cut(s)	904, 944, 970
SphI	GCATGC	2 cut(s)	1216, 3110
SseBI	AGGCCT	1 cut(s)	280
SspI	AATATT	1 cut(s)	835
SspMI	CTAG	5 cut(s)	1428, 2031, 2127, 2523, 2615
SstI	GAGCTC	1 cut(s)	945
StuI	AGGCCT	1 cut(s)	280
StyI	CCWWGG	4 cut(s)	350, 413, 1105, 2806
TaiI	ACGT	2 cut(s)	123, 2352
TaqI	TCGA	3 cut(s)	148, 403, 2449
TaqII	GACCGA	1 cut(s)	3014
TatI	WGTACW	4 cut(s)	966, 1479, 2836, 2946
TauI	GCSGC	9 cut(s)	21, 214, 255, 295, 376, 1068, 1698, 2366, 2686
TfiI	GAWTC	6 cut(s)	241, 247, 400, 1036, 2428, 2513
TseFI	GTSAC	6 cut(s)	847, 1321, 2185, 2792, 2995, 3022
TseI	GCWGC	8 cut(s)	214, 346, 385, 979, 1068, 1121, 2393, 2438
Tsp45I	GTSAC	6 cut(s)	847, 1321, 2185, 2792, 2995, 3022
TspGWI	ACGGA	3 cut(s)	60, 612, 3010
Vha464I	CTTAAG	2 cut(s)	904, 970
VneI	GTGCAC	2 cut(s)	2759, 2914
VpaK11BI	GGWCC	3 cut(s)	1166, 1682, 1927
XagI	CCTNNNNNAGG	2 cut(s)	1109, 2908
XapI	RAATTY	5 cut(s)	794, 1085, 1541, 1840, 2482
XbaI	TCTAGA	2 cut(s)	2126, 2522
XceI	RCATGY	2 cut(s)	1216, 3110
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1881
XmnI	GAANNNNTTC	1 cut(s)	836
XspI	CTAG	5 cut(s)	1428, 2031, 2127, 2523, 2615
ZrmI	AGTACT	1 cut(s)	968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.