Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Reverse (-)

5639804 .. 5643302

Gene Structure 3499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G108000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGGTGGTGAAAGAGGTGATTATGGTGGCTACGGCAGAGGAAGTGGAGGAGGAAGAGGTGGTTATGGCGGTCATGGTGGTGGTGGGTCCCAGTACCACCATCAACAACAACCGCTGCAGCAGCAGCAGTATACAACAACCGAATGAGAGTTCGGGCCAGCAAGGGAGGCCTTCTCCATGGAATAGTCCCGCTCCCACCAGAGCAGCCTCTCCTGCTGTATCTCCAGCCCCGATCAACTCTCCTACTCCCGATACTCTTGTTCCTAGAATGCAATCTCTGGAAATTTCGAAACAGGCACTTTCTTCGCCTTCTTTGGATGAAGCAGACAAAAAACTCCCTGTGAGACGGCCTGATAATGGAGGCACAAAATCTATCCGAACTACTAGGCTTCGTGCTAATCATTTTAATCTCTCGTACAATCCTGAGAGTATTATAAGGCACTACGATGTTGATGTCAAGCCAGAGAAGCCTGCTAAAAATGGCCGTCCTGTGAAAATGTCGAAGTCTGAACTCTCTGCAATCAGGAAGAAGTTATCCTATGATAATCCTTCGGATTTTCCCTTGTCAAGTACCGCATGTGATGATGGAAAGAACATCTTCAGTGCAGTGCCATTGCCCACCGGATCATTTAAGGTGGAGGTTTCTGAGGAAGAAGGCACGCGGTTCAGTTCATACATATTTACCATAAATTTGGTAAATGAGCTCAAGCTTTGCAAGTTGAAGGAGTACTGTAGTGGCCAACTCTTGTCTATCCCTCGTGATATATTGCAGGGTATGGATTTGGTGATGAAAGAAAATCCAACTAGGTGCTTGGTTTCTGTTGGGCGAAGCTTTTACCCCGCTACATCAAATCAAAACGATGACCTTGGACATGGTATTGCTGCATTTAGAGGGTTTCAGCAAAGCTCAAGGATGACTTTCCAGGGTCCTGCCTTGTGTCTTGACTACTCAGTCTTGGCATTTTATAAGCGCCTGCCCGTTATAGATTTTCTGCAAGAGCAGATCAGGGGCTTTGATTTAAACAATCTCAACAGGTTTAGGAGAGAGGTTGTGGATGTATTGATGGGATTGAAAGTTACCGTGACACACCTTAGAACCAAGCAAAAGTACATCATCAAGGGGCTGACTGATAAGAATGCAGGAGACATTACATTTGATGCTGCAGGCATAGATGGCCAGTGTACACCTAAGAAAGTTAGGCTGCTTGATTATTTCAGGGAAAAATACCAGGAGATCCAGTACAAAAACATTCCCTGCTTGGATTTGGGGAAAAATGGTAGGAAGAACTATACACCGCTGGAGTTCTGTGTCTTAGTTGAGGGGCAAAGGTATCCAAAGGAGAATTTGGACAGAAATGCAGCTATCAAGCTGAAGGACATGTCATTGGCTTCACCAAAGGTTAGAGAGAACATGATATGTGGCATGGTACAATCTGGTGATGGACCTTGTGGTGGTGGCATCATTGAGAATTTTGGAATTGAAGTCAACATGAATATGACATCAGTAATAGGGCGTGTCATTGTCCCACCTGAGTTGAAGTTGGGTCCTTCTTCTGATGGCAGGATGACTAAGGTAACAGTTGACCGAGAAAAATGCCATTGGAATCTTGTTGGGAAGTCTCTAGTGGAAGGAAAACCAATCAGTCACTGGGCTGTACTTGACTTCAGCAGTTATGATCGATTCTGTCTGGATCCTACTCAATTCATCCCAAAGCTCATCACAAAGTGCAACAAACTGGGAATCATAATGGGAGAGCCTGTTTTGTACGAAGCCATTTCCATGAGACCATTCACTAGTATGCTTCGTCAGCTGCTTGAAAGCATTAATGAACAGGCATACAAAAAAAGCAAAGGCCATTTACAATTACTTGTTTGTGTAATGGCTCGAAAAGATCCTGGTTACAAGTATCTGAAGTGGATCTCTGAGACTCAAATTGGTATAGTGACGCAGTGCTGCTTGTCAAATATGGCTAACAAAGCAAATGACCAGTATCTTTCAAATCTTGCCCTTAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTAAGTGATCGGTTTCCCCTCTTTGGGGTTGCAGGCCATGTTATGTTTGTGGGGGCTGATGTGAATCATCCTGCTGCGCGGAACACGACAAGTCCATCAATTGCAGCTGTTGTTGCCACTGTAAACTGGCCTGCCGCGAATCGTTATGCTGCACGAGTCCGACCCCAGGACCATCGCACTGAGAAGATATTGAATTTTGGAGACATGTGTCTGGAGCTTGTTGAAACTTATGAGCGATTGAATAAAGTCAAGCCGGACAAAATTGTTGTCTTCCGTGATGGAGTCAGTGAGGGCCAGTTTGATATGGTTCGCAATGAAGAGTTACTAGATCTGAAAAGGGCTTTAGGAGGTATAAAATACTATCCAACCATCACACTAATTGTTGCCCAGAAACGGCACCATACTCGTCTCTTTCCGGAGAGTATGAGGGATGGTAGTTCCACAGGCAACGTATTACCGGGAACTGTGGTGGACACAATAATCGTGCACCCATTTCAGTTTGACTTCTATCTCTGCAGTCATTATGGAGCCCTTGGAACAAGCAAACCCACACGCTACCATGTTCTTTGGGATGAACACTGGTTTACTTCTGACCAATTGCAGAAGCTCATATATGACTTGTGCTTCACGTTTGCAAGGTGTACTAAACCGGTATCGTTGGTCCCACCGGTGTATTATGCTGACCTTGTGGCATATAGAGGGCGATTATACCATGAGAGTATGGAGGGACAGTCTCCAGCTTCAGCATCCTCCTCCTCATCATCATCATCCTCAGCATCGTCACCACTATCAGTGGCTTCTCTAGAGAAAAGGTTTTACAAACTGCATGCTGACCTGGAAAACACAATGTTTTTCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

969

Amino Acids

108.05

Weight (kDa)

8.85

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	434, 966
AasI	GACNNNNNNGTC	1 cut(s)	950
AccB1I	GGYRCC	1 cut(s)	2442
AccBSI	CCGCTC	1 cut(s)	191
AccI	GTMKAC	1 cut(s)	130
AccII	CGCG	3 cut(s)	661, 2125, 2183
AccIII	TCCGGA	1 cut(s)	2461
AciI	CCGC	9 cut(s)	68, 112, 189, 573, 661, 840, 1295, 2125, 2181
AclWI	GGATC	6 cut(s)	631, 1228, 1685, 1698, 1886, 1925
AcoI	YGGCCR	3 cut(s)	481, 736, 1174
AcsI	RAATTY	5 cut(s)	282, 688, 1342, 1468, 2239
AcuI	CTGAAG	5 cut(s)	583, 1391, 1648, 1931, 2772
AdeI	CACNNNGTG	1 cut(s)	1725
AfiI	CCNNNNNNNGG	7 cut(s)	356, 1451, 2069, 2070, 2071, 2212, 2439
AflII	CTTAAG	1 cut(s)	2009
AflIII	ACRYGT	2 cut(s)	1377, 2250
AgeI	ACCGGT	2 cut(s)	2695, 2713
AgsI	TTSAA	9 cut(s)	721, 1072, 1481, 1537, 1817, 1998, 2239, 2270, 2287
AhlI	ACTAGT	1 cut(s)	1793
AjnI	CCWGG	5 cut(s)	921, 1227, 1894, 2211, 2880
Alw21I	GWGCWC	2 cut(s)	705, 2535
Alw26I	GTCTC	8 cut(s)	337, 1137, 1623, 1777, 1919, 2241, 2459, 2784
Alw44I	GTGCAC	1 cut(s)	2531
AlwI	GGATC	6 cut(s)	631, 1228, 1685, 1698, 1886, 1925
AlwNI	CAGNNNCTG	1 cut(s)	1647
Aor13HI	TCCGGA	1 cut(s)	2461
ApaLI	GTGCAC	1 cut(s)	2531
ApoI	RAATTY	5 cut(s)	282, 688, 1342, 1468, 2239
ArsI	GACNNNNNNTTYG	4 cut(s)	1136, 1168, 2298, 2330
AseI	ATTAAT	1 cut(s)	1824
AsiGI	ACCGGT	2 cut(s)	2695, 2713
Asp700I	GAANNNNTTC	1 cut(s)	596
AspLEI	GCGC	2 cut(s)	972, 2125
AspS9I	GGNCC	8 cut(s)	86, 154, 926, 1442, 1544, 2215, 2338, 2707
AsuC2I	CCSGG	1 cut(s)	2505
AsuHPI	GGTGA	6 cut(s)	19, 28, 796, 1383, 1448, 2820
AsuII	TTCGAA	1 cut(s)	287
AvaII	GGWCC	6 cut(s)	86, 926, 1442, 1544, 2215, 2707
BaeGI	GKGCMC	1 cut(s)	2535
BaeI	ACNNNNGTAYC	2 cut(s)	243, 276
BalI	TGGCCA	2 cut(s)	738, 1176
BamHI	GGATCC	1 cut(s)	1690
BanI	GGYRCC	1 cut(s)	2442
BanII	GRGCYC	2 cut(s)	705, 2578
BauI	CACGAG	2 cut(s)	756, 2199
BbsI	GAAGAC	1 cut(s)	2308
Bbv12I	GWGCWC	2 cut(s)	705, 2535
BbvCI	CCTCAGC	1 cut(s)	2818
BceAI	ACGGC	4 cut(s)	48, 362, 468, 2456
BcgI	CGANNNNNNTGC	6 cut(s)	285, 319, 1575, 1609, 2432, 2466
BciT130I	CCWGG	5 cut(s)	923, 1229, 1896, 2213, 2882
BciVI	GTATCC	1 cut(s)	1341
BcnI	CCSGG	1 cut(s)	2505
BcoDI	GTCTC	8 cut(s)	337, 1137, 1623, 1777, 1919, 2241, 2459, 2784
BcuI	ACTAGT	1 cut(s)	1793
BfaI	CTAG	7 cut(s)	264, 384, 804, 1622, 1794, 2372, 2849
BfmI	CTRYAG	4 cut(s)	115, 730, 1161, 2560
BfoI	RGCGCY	1 cut(s)	973
BfrI	CTTAAG	1 cut(s)	2009
BfuI	GTATCC	1 cut(s)	1341
BglII	AGATCT	1 cut(s)	2374
BmcAI	AGTACT	1 cut(s)	728
Bme1390I	CCNGG	6 cut(s)	923, 1229, 1896, 2213, 2505, 2882
Bme18I	GGWCC	6 cut(s)	86, 926, 1442, 1544, 2215, 2707
BmgT120I	GGNCC	8 cut(s)	86, 154, 926, 1442, 1544, 2215, 2338, 2707
BmiI	GGNNCC	8 cut(s)	87, 88, 927, 1545, 1692, 2444, 2575, 2709
BmrFI	CCNGG	6 cut(s)	923, 1229, 1896, 2213, 2505, 2882
BmrI	ACTGGG	3 cut(s)	84, 1657, 1745
BmsI	GCATC	4 cut(s)	1147, 1467, 2801, 2831
BmuI	ACTGGG	3 cut(s)	84, 1657, 1745
BoxI	GACNNNNGTC	1 cut(s)	2253
BpiI	GAAGAC	1 cut(s)	2308
BplI	GAGNNNNNCTC	2 cut(s)	157, 189
BpmI	CTGGAG	4 cut(s)	207, 1319, 2279, 2766
Bpu10I	CCTNAGC	1 cut(s)	2818
Bpu14I	TTCGAA	1 cut(s)	287
BpuEI	CTTGAG	2 cut(s)	689, 892
BpuMI	CCSGG	1 cut(s)	2505
Bsa29I	ATCGAT	1 cut(s)	1678
BsaBI	GATNNNNATC	1 cut(s)	2109
BsaI	GGTCTC	1 cut(s)	1777
BsaJI	CCNNGG	5 cut(s)	176, 865, 922, 2211, 2578
BsaWI	WCCGGW	4 cut(s)	620, 2461, 2695, 2713
BsaXI	ACNNNNNCTCC	6 cut(s)	1223, 1253, 1743, 1773, 2762, 2792
Bsc4I	CCNNNNNNNGG	7 cut(s)	356, 1451, 2069, 2070, 2071, 2212, 2439
Bse118I	RCCGGY	2 cut(s)	2695, 2713
Bse1I	ACTGG	9 cut(s)	90, 1177, 1237, 1652, 1740, 1987, 2177, 2341, 2630
Bse3DI	GCAATG	2 cut(s)	611, 2365
Bse8I	GATNNNNATC	1 cut(s)	2109
BseAI	TCCGGA	1 cut(s)	2461
BseBI	CCWGG	5 cut(s)	923, 1229, 1896, 2213, 2882
BseCI	ATCGAT	1 cut(s)	1678
BseDI	CCNNGG	5 cut(s)	176, 865, 922, 2211, 2578
BseJI	GATNNNNATC	1 cut(s)	2109
BseLI	CCNNNNNNNGG	7 cut(s)	356, 1451, 2069, 2070, 2071, 2212, 2439
BseMI	GCAATG	2 cut(s)	611, 2365
BseMII	CTCAG	7 cut(s)	414, 636, 963, 1521, 1914, 2217, 2832
BseNI	ACTGG	9 cut(s)	90, 1177, 1237, 1652, 1740, 1987, 2177, 2341, 2630
BseRI	GAGGAG	3 cut(s)	62, 2788, 2791
BseSI	GKGCMC	1 cut(s)	2535
BsgI	GTGCAG	2 cut(s)	624, 2181
Bsh1236I	CGCG	3 cut(s)	661, 2125, 2183
BshNI	GGYRCC	1 cut(s)	2442
BshTI	ACCGGT	2 cut(s)	2695, 2713
BshVI	ATCGAT	1 cut(s)	1678
BsiHKAI	GWGCWC	2 cut(s)	705, 2535
BsiSI	CCGG	6 cut(s)	621, 2300, 2462, 2504, 2696, 2714
BslFI	GGGAC	5 cut(s)	72, 171, 1508, 2693, 2787
BslI	CCNNNNNNNGG	7 cut(s)	356, 1451, 2069, 2070, 2071, 2212, 2439
BsmAI	GTCTC	8 cut(s)	337, 1137, 1623, 1777, 1919, 2241, 2459, 2784
BsmBI	CGTCTC	2 cut(s)	337, 2459
BsmFI	GGGAC	5 cut(s)	72, 171, 1508, 2693, 2787
BsmI	GAATGC	2 cut(s)	273, 1141
Bso31I	GGTCTC	1 cut(s)	1777
Bsp119I	TTCGAA	1 cut(s)	287
Bsp1286I	GDGCHC	3 cut(s)	705, 2535, 2578
Bsp13I	TCCGGA	1 cut(s)	2461
Bsp1407I	TGTACA	1 cut(s)	1181
Bsp19I	CCATGG	1 cut(s)	176
BspACI	CCGC	9 cut(s)	68, 112, 189, 573, 661, 840, 1295, 2125, 2181
BspCNI	CTCAG	7 cut(s)	415, 637, 962, 1522, 1915, 2218, 2831
BspDI	ATCGAT	1 cut(s)	1678
BspEI	TCCGGA	1 cut(s)	2461
BspFNI	CGCG	3 cut(s)	661, 2125, 2183
BspLI	GGNNCC	8 cut(s)	87, 88, 927, 1545, 1692, 2444, 2575, 2709
BspMAI	CTGCAG	3 cut(s)	119, 1165, 2564
BspPI	GGATC	6 cut(s)	631, 1228, 1685, 1698, 1886, 1925
BspT104I	TTCGAA	1 cut(s)	287
BspT107I	GGYRCC	1 cut(s)	2442
BspTI	CTTAAG	1 cut(s)	2009
BspTNI	GGTCTC	1 cut(s)	1777
BsrBI	CCGCTC	1 cut(s)	191
BsrDI	GCAATG	2 cut(s)	611, 2365
BsrFI	RCCGGY	2 cut(s)	2695, 2713
BsrGI	TGTACA	1 cut(s)	1181
BsrI	ACTGG	9 cut(s)	90, 1177, 1237, 1652, 1740, 1987, 2177, 2341, 2630
BssAI	RCCGGY	2 cut(s)	2695, 2713
BssECI	CCNNGG	5 cut(s)	176, 865, 922, 2211, 2578
BssNAI	GTATAC	1 cut(s)	131
BssSI	CACGAG	2 cut(s)	756, 2199
BssT1I	CCWWGG	3 cut(s)	176, 865, 2578
Bst1107I	GTATAC	1 cut(s)	131
Bst2BI	CACGAG	2 cut(s)	756, 2199
Bst2UI	CCWGG	5 cut(s)	923, 1229, 1896, 2213, 2882
Bst4CI	ACNGT	6 cut(s)	731, 1081, 1579, 2167, 2512, 2778
Bst6I	CTCTTC	2 cut(s)	48, 2358
BstAFI	CTTAAG	1 cut(s)	2009
BstAUI	TGTACA	1 cut(s)	1181
BstBI	TTCGAA	1 cut(s)	287
BstC8I	GCNNGC	8 cut(s)	158, 471, 659, 974, 1165, 2080, 2178, 2874
BstDSI	CCRYGG	1 cut(s)	176
BstFNI	CGCG	3 cut(s)	661, 2125, 2183
BstH2I	RGCGCY	1 cut(s)	973
BstHHI	GCGC	2 cut(s)	972, 2125
BstMAI	GTCTC	8 cut(s)	337, 1137, 1623, 1777, 1919, 2241, 2459, 2784
BstMWI	GCNNNNNNNGC	9 cut(s)	120, 123, 166, 212, 466, 1173, 1807, 1976, 2159
BstNI	CCWGG	5 cut(s)	923, 1229, 1896, 2213, 2882
BstNSI	RCATGY	4 cut(s)	579, 1381, 2254, 2876
BstPAI	GACNNNNGTC	1 cut(s)	2253
BstSCI	CCNGG	6 cut(s)	921, 1227, 1894, 2211, 2503, 2880
BstSFI	CTRYAG	4 cut(s)	115, 730, 1161, 2560
BstSLI	GKGCMC	1 cut(s)	2535
BstUI	CGCG	3 cut(s)	661, 2125, 2183
BstV2I	GAAGAC	1 cut(s)	2308
BstX2I	RGATCY	5 cut(s)	1233, 1690, 1891, 1917, 2374
BstXI	CCANNNNNNTGG	1 cut(s)	691
BstYI	RGATCY	5 cut(s)	1233, 1690, 1891, 1917, 2374
BstZ17I	GTATAC	1 cut(s)	131
Bsu15I	ATCGAT	1 cut(s)	1678
BsuI	GTATCC	1 cut(s)	1341
BsuTUI	ATCGAT	1 cut(s)	1678
BtgI	CCRYGG	1 cut(s)	176
BtgZI	GCGATG	1 cut(s)	2204
BtsI	GCAGTG	2 cut(s)	612, 1955
Cac8I	GCNNGC	8 cut(s)	158, 471, 659, 974, 1165, 2080, 2178, 2874
CaiI	CAGNNNCTG	1 cut(s)	1647
CfoI	GCGC	2 cut(s)	972, 2125
Cfr10I	RCCGGY	2 cut(s)	2695, 2713
Cfr13I	GGNCC	8 cut(s)	86, 154, 926, 1442, 1544, 2215, 2338, 2707
ClaI	ATCGAT	1 cut(s)	1678
CseI	GACGC	1 cut(s)	1954
CspAI	ACCGGT	2 cut(s)	2695, 2713
CspCI	CAANNNNNGTGG	2 cut(s)	1515, 1550
DraI	TTTAAA	1 cut(s)	1020
DraIII	CACNNNGTG	1 cut(s)	1725
DrdI	GACNNNNNNGTC	1 cut(s)	950
DseDI	GACNNNNNNGTC	1 cut(s)	950
EaeI	YGGCCR	3 cut(s)	481, 736, 1174
Eam1104I	CTCTTC	2 cut(s)	48, 2358
EarI	CTCTTC	2 cut(s)	48, 2358
Ecl136II	GAGCTC	1 cut(s)	703
Eco130I	CCWWGG	3 cut(s)	176, 865, 2578
Eco147I	AGGCCT	1 cut(s)	169
Eco24I	GRGCYC	2 cut(s)	705, 2578
Eco31I	GGTCTC	1 cut(s)	1777
Eco47I	GGWCC	6 cut(s)	86, 926, 1442, 1544, 2215, 2707
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	5 cut(s)	583, 1391, 1648, 1931, 2772
EcoICRI	GAGCTC	1 cut(s)	703
EcoO109I	RGGNCCY	3 cut(s)	86, 926, 1544
EcoRII	CCWGG	5 cut(s)	921, 1227, 1894, 2211, 2880
EcoT14I	CCWWGG	3 cut(s)	176, 865, 2578
EcoT38I	GRGCYC	2 cut(s)	705, 2578
ErhI	CCWWGG	3 cut(s)	176, 865, 2578
Esp3I	CGTCTC	2 cut(s)	337, 2459
FalI	AAGNNNNNCTT	4 cut(s)	581, 613, 901, 933
FaqI	GGGAC	5 cut(s)	72, 171, 1508, 2693, 2787
FauI	CCCGC	2 cut(s)	196, 847
FauNDI	CATATG	1 cut(s)	2903
FblI	GTMKAC	1 cut(s)	130
FriOI	GRGCYC	2 cut(s)	705, 2578
FspBI	CTAG	7 cut(s)	264, 384, 804, 1622, 1794, 2372, 2849
GlaI	GCGC	2 cut(s)	971, 2124
GsuI	CTGGAG	4 cut(s)	207, 1319, 2279, 2766
HaeII	RGCGCY	1 cut(s)	973
HapII	CCGG	6 cut(s)	621, 2300, 2462, 2504, 2696, 2714
HgaI	GACGC	1 cut(s)	1954
HhaI	GCGC	2 cut(s)	972, 2125
Hin6I	GCGC	2 cut(s)	970, 2123
HinP1I	GCGC	2 cut(s)	970, 2123
HincII	GTYRAC	2 cut(s)	1486, 1582
HindII	GTYRAC	2 cut(s)	1486, 1582
HindIII	AAGCTT	3 cut(s)	707, 829, 2024
HinfI	GANTC	8 cut(s)	1603, 1680, 1740, 1927, 2110, 2185, 2202, 2328
HpaII	CCGG	6 cut(s)	621, 2300, 2462, 2504, 2696, 2714
HphI	GGTGA	6 cut(s)	19, 28, 796, 1383, 1448, 2820
HpyAV	CCTTC	8 cut(s)	180, 318, 558, 647, 715, 1366, 1557, 1622
HpyCH4III	ACNGT	6 cut(s)	731, 1081, 1579, 2167, 2512, 2778
HpyCH4IV	ACGT	2 cut(s)	2496, 2675
HpyF10VI	GCNNNNNNNGC	9 cut(s)	120, 123, 166, 212, 466, 1173, 1807, 1976, 2159
HpySE526I	ACGT	2 cut(s)	2496, 2675
HspAI	GCGC	2 cut(s)	970, 2123
KflI	GGGWCCC	1 cut(s)	86
Kpn2I	TCCGGA	1 cut(s)	2461
LmnI	GCTCC	3 cut(s)	196, 2260, 2573
LweI	GCATC	4 cut(s)	1147, 1467, 2801, 2831
MaeI	CTAG	7 cut(s)	264, 384, 804, 1622, 1794, 2372, 2849
MaeII	ACGT	2 cut(s)	2496, 2675
MaeIII	GTNAC	8 cut(s)	1075, 1081, 1573, 1643, 1898, 1942, 2367, 2826
MbiI	CCGCTC	1 cut(s)	191
MfeI	CAATTG	2 cut(s)	2145, 2642
MflI	RGATCY	5 cut(s)	1233, 1690, 1891, 1917, 2374
MhlI	GDGCHC	3 cut(s)	705, 2535, 2578
MlsI	TGGCCA	2 cut(s)	738, 1176
MluNI	TGGCCA	2 cut(s)	738, 1176
MlyI	GAGTC	3 cut(s)	1921, 2211, 2337
MmeI	TCCRAC	3 cut(s)	824, 2230, 2435
Mox20I	TGGCCA	2 cut(s)	738, 1176
MroI	TCCGGA	1 cut(s)	2461
MroXI	GAANNNNTTC	1 cut(s)	596
MscI	TGGCCA	2 cut(s)	738, 1176
MseI	TTAA	5 cut(s)	405, 630, 1019, 1824, 2010
MslI	CAYNNNNRTG	5 cut(s)	77, 444, 1493, 1778, 1796
Msp20I	TGGCCA	2 cut(s)	738, 1176
MspA1I	CMGCKG	4 cut(s)	114, 1297, 1810, 2153
MspCI	CTTAAG	1 cut(s)	2009
MspI	CCGG	6 cut(s)	621, 2300, 2462, 2504, 2696, 2714
MspR9I	CCNGG	6 cut(s)	923, 1229, 1896, 2213, 2505, 2882
MunI	CAATTG	2 cut(s)	2145, 2642
Mva1269I	GAATGC	2 cut(s)	273, 1141
MvaI	CCWGG	5 cut(s)	923, 1229, 1896, 2213, 2882
MvnI	CGCG	3 cut(s)	661, 2125, 2183
MwoI	GCNNNNNNNGC	9 cut(s)	120, 123, 166, 212, 466, 1173, 1807, 1976, 2159
NciI	CCSGG	1 cut(s)	2505
NcoI	CCATGG	1 cut(s)	176
NdeI	CATATG	1 cut(s)	2903
NlaIV	GGNNCC	8 cut(s)	87, 88, 927, 1545, 1692, 2444, 2575, 2709
NmuCI	GTSAC	4 cut(s)	1081, 1643, 1942, 2826
NspI	RCATGY	4 cut(s)	579, 1381, 2254, 2876
NspV	TTCGAA	1 cut(s)	287
PaeI	GCATGC	1 cut(s)	2876
PceI	AGGCCT	1 cut(s)	169
PciI	ACATGT	2 cut(s)	1377, 2250
PctI	GAATGC	2 cut(s)	273, 1141
PdmI	GAANNNNTTC	1 cut(s)	596
PfeI	GAWTC	5 cut(s)	1603, 1680, 1740, 2110, 2185
PinAI	ACCGGT	2 cut(s)	2695, 2713
PleI	GAGTC	3 cut(s)	1921, 2210, 2336
PpsI	GAGTC	3 cut(s)	1921, 2210, 2336
PpuMI	RGGWCCY	3 cut(s)	86, 926, 1544
PscI	ACATGT	2 cut(s)	1377, 2250
PshAI	GACNNNNGTC	1 cut(s)	2253
PshBI	ATTAAT	1 cut(s)	1824
PsiI	TTATAA	2 cut(s)	434, 966
Psp124BI	GAGCTC	1 cut(s)	705
Psp5II	RGGWCCY	3 cut(s)	86, 926, 1544
Psp6I	CCWGG	5 cut(s)	921, 1227, 1894, 2211, 2880
PspGI	CCWGG	5 cut(s)	921, 1227, 1894, 2211, 2880
PspN4I	GGNNCC	8 cut(s)	87, 88, 927, 1545, 1692, 2444, 2575, 2709
PspPI	GGNCC	8 cut(s)	86, 154, 926, 1442, 1544, 2215, 2338, 2707
PspPPI	RGGWCCY	3 cut(s)	86, 926, 1544
PstI	CTGCAG	3 cut(s)	119, 1165, 2564
PstNI	CAGNNNCTG	1 cut(s)	1647
PsuI	RGATCY	5 cut(s)	1233, 1690, 1891, 1917, 2374
PvuII	CAGCTG	2 cut(s)	1810, 2153
RseI	CAYNNNNRTG	5 cut(s)	77, 444, 1493, 1778, 1796
SacI	GAGCTC	1 cut(s)	705
SaqAI	TTAA	5 cut(s)	405, 630, 1019, 1824, 2010
Sau96I	GGNCC	8 cut(s)	86, 154, 926, 1442, 1544, 2215, 2338, 2707
ScaI	AGTACT	1 cut(s)	728
SchI	GAGTC	3 cut(s)	1921, 2211, 2337
ScrFI	CCNGG	6 cut(s)	923, 1229, 1896, 2213, 2505, 2882
SduI	GDGCHC	3 cut(s)	705, 2535, 2578
SfaNI	GCATC	4 cut(s)	1147, 1467, 2801, 2831
SfcI	CTRYAG	4 cut(s)	115, 730, 1161, 2560
SfuI	TTCGAA	1 cut(s)	287
SgrAI	CRCCGGYG	1 cut(s)	2713
SinI	GGWCC	6 cut(s)	86, 926, 1442, 1544, 2215, 2707
SmiMI	CAYNNNNRTG	5 cut(s)	77, 444, 1493, 1778, 1796
SmlI	CTYRAG	3 cut(s)	704, 907, 2009
SmoI	CTYRAG	3 cut(s)	704, 907, 2009
SpeI	ACTAGT	1 cut(s)	1793
SphI	GCATGC	1 cut(s)	2876
SseBI	AGGCCT	1 cut(s)	169
SsiI	CCGC	9 cut(s)	68, 112, 189, 573, 661, 840, 1295, 2125, 2181
SspMI	CTAG	7 cut(s)	264, 384, 804, 1622, 1794, 2372, 2849
SstI	GAGCTC	1 cut(s)	705
StuI	AGGCCT	1 cut(s)	169
StyD4I	CCNGG	6 cut(s)	921, 1227, 1894, 2211, 2503, 2880
StyI	CCWWGG	3 cut(s)	176, 865, 2578
TaaI	ACNGT	6 cut(s)	731, 1081, 1579, 2167, 2512, 2778
TaiI	ACGT	2 cut(s)	2499, 2678
TaqI	TCGA	4 cut(s)	287, 500, 1678, 1885
TaqII	GACCGA	1 cut(s)	1599
TatI	WGTACW	6 cut(s)	726, 1107, 1181, 1239, 1654, 2687
TauI	GCSGC	1 cut(s)	2183
TfiI	GAWTC	5 cut(s)	1603, 1680, 1740, 2110, 2185
Tru1I	TTAA	5 cut(s)	405, 630, 1019, 1824, 2010
Tru9I	TTAA	5 cut(s)	405, 630, 1019, 1824, 2010
TseFI	GTSAC	4 cut(s)	1081, 1643, 1942, 2826
Tsp45I	GTSAC	4 cut(s)	1081, 1643, 1942, 2826
TspDTI	ATGAA	9 cut(s)	333, 660, 803, 1505, 1693, 1842, 2376, 2634, 2890
TspGWI	ACGGA	1 cut(s)	2309
Vha464I	CTTAAG	1 cut(s)	2009
VneI	GTGCAC	1 cut(s)	2531
VpaK11BI	GGWCC	6 cut(s)	86, 926, 1442, 1544, 2215, 2707
VspI	ATTAAT	1 cut(s)	1824
XapI	RAATTY	5 cut(s)	282, 688, 1342, 1468, 2239
XbaI	TCTAGA	1 cut(s)	2848
XceI	RCATGY	4 cut(s)	579, 1381, 2254, 2876
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1644
XmiI	GTMKAC	1 cut(s)	130
XmnI	GAANNNNTTC	1 cut(s)	596
XspI	CTAG	7 cut(s)	264, 384, 804, 1622, 1794, 2372, 2849
ZrmI	AGTACT	1 cut(s)	728

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.